Nematostella vectensis (starlet sea anemone): 5505588
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Entry
5505588 CDS
T01037
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog isoform X1
KO
K15176
RNA polymerase-associated protein CTR9
Organism
nve
Nematostella vectensis (starlet sea anemone)
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nve03021
]
5505588
Transcription machinery [BR:
nve03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
5505588
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_14
TPR_12
TPR_16
TPR_8
TPR_CcmH_CycH
TPR_10
TPR_11
TPR_17
ARM_TT21_5th
TPR_7
TPR_Slam
ANAPC3
ARM_TT21_4th
TPR_9
ARM_TT21_C
PknG_TPR
TPPII_C
NatA_aux_su
TPR_EMC2
Peptidase_S41_N
Motif
Other DBs
NCBI-GeneID:
5505588
NCBI-ProteinID:
XP_032229795
LinkDB
All DBs
Position
Unknown
AA seq
1140 aa
AA seq
DB search
MATSIEIPLRDTDEVIELQFDQLPDGEELLSILKQEDVRLNIWNTLALQYYKQGKTEDFI
RILESARTDANRKYGDSEKDQMVCLDTLAAFYVQQARKEKNKEKKKELFTQATSLYTMAD
KIIMYDQNHLLGRAYFCLLEGDKMEQADAQFNFVLAQSGNNIPALLGKACIFFNKRDYKN
ALAFYKKALRTNPNCPGAVRLGMGHCFVKLNKLDKARLAFKRALELEPRCTGAMVGLAIL
ELNSKKPDSIKIGVQLLSKAYTIDNSNPMVLNHLANHFFFKKDYSKVQHLALHAFHGTEV
EAMQAESCYQLARAFHVQGDFDQAFQYYYQATQFASPNFILPHFGLGQMYIARRDLNNAS
QCFEKVLKAMPGNYETMKILGSLYSPSSDLVKRELARQHLKKVTEQHPDDVEAWIELAGI
LEQSDVQAALQAYGTASRLLKEKVEADVPPEILNNVGALHFRLGNLKEAKRFYESSLDRS
KQESHNDESYYNAISVTTTYNLARLHEAMCEIDKAEQLYKNILREHPNYVDCYLRLGCMA
RNRGQIYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTANDA
YSLLALGNVWLQTLHAPTRDKAKERRHQDRALAMYKQVLRNDSRNLYAANGIGCILAHKG
YIREARDVFSQVREATADVPDVWLNLAHIYVEQKQYVSAIQMYENCLRKFFKHHSVEVML
YLARAYYRAGKLKDCKRVLLKARHVSPNDTILLFNVSLVQQKLATGILRAEKSSLKVVLG
AVGELEQAQRNFTWLSRHGDRMKFDLAWAAYESRHTSDLLSQAQYHVSRARKLDEQEQEL
RRKQEAEKEALRRSKEEEERSRQKEREEQERLMLEKRQQFVEATKNKLVFNEAEMAAAEK
KAKGGRKRAKDDDFVDDSSSSSADEGGDEEGGEGKVKAKKEKKDKKRKKRRTGGEGEDKP
KKQRKPRAPRAPKEKKPRKDKKSAANEERLSAKQRMKIKSKAYVSSSEDSSDSDNDKLKI
TDVGSDDEKAERSAVESHDGSGQEERASGDERISDASHVTSEEEMQASDAESEEKEKDEE
SSDAEAPSSSRKRVISSDDDDELDEKLDDDDDNNDDEEESKPTPKKRVRQLASSSESDEE
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtccatcgagattccacttcgtgacacagatgaagtgatagagctccagttt
gatcaattaccagacggggaagaactacttagcatcctaaagcaagaagatgtcaggctg
aatatttggaacacgctcgctctgcaatactacaagcaagggaaaacagaggactttatc
agaatattggagtctgcaaggactgatgcaaatcgcaaatatggagacagtgagaaagat
caaatggtgtgtctggacactctggccgcattctatgtccagcaagccagaaaggagaag
aacaaggagaaaaagaaagagcttttcactcaagccacatctctctacactatggctgat
aagatcatcatgtacgaccaaaaccatctgctgggtagagcatacttttgccttcttgaa
ggtgacaagatggaacaagctgatgcacagttcaactttgtgcttgcccagtctgggaac
aacattccagctctcttaggaaaggcttgtatcttcttcaacaagagagattataaaaat
gccttagccttctacaagaaggcattgcgaaccaaccctaactgccctggtgctgtgcgg
ctgggaatgggtcattgctttgtaaaactaaacaagcttgataaagccagactggcattc
aagagagctcttgagcttgaaccaaggtgcactggggccatggttgggttggctatatta
gagctgaactcaaaaaagcctgattctatcaagatcggtgtgcagttgttatctaaggca
tacactatcgataactccaaccctatggtgctcaaccatctggcaaaccacttcttcttc
aagaaggattacagcaaagtccagcaccttgccctccatgctttccacggtactgaggta
gaggccatgcaagcagagagttgctaccaactggccagggcattccacgtccagggtgac
tttgaccaggcattccagtactattaccaggctacacagtttgcatcgccgaacttcata
ctcccccactttggtcttggacagatgtacattgcacgacgagatttgaacaatgcatcc
cagtgctttgagaaggttctaaaagccatgcctggcaactatgagactatgaagatcttg
gggtctctctacagcccatcatctgacctggtcaagagggagctggcaaggcaacatcta
aagaaggtaacagagcaacatccagatgatgttgaggcatggattgagttagcaggcatc
cttgagcagtcagatgttcaagcagcattacaggcatacggcactgcctcacggctactc
aaggagaaagtggaggcagatgtaccaccagagatcctcaataatgtgggggctttgcat
ttcaggcttggaaacctcaaagaagcaaagcgtttttatgagtcatccctggatcgctcc
aagcaggaaagtcataatgatgagagctactataatgcaatctctgtcactacaacctac
aacctggcccgcctgcatgaggccatgtgtgagattgacaaagctgaacagctctacaaa
aatatcctcagggagcacccgaactatgtggactgttatctgaggcttggatgcatggca
cgaaatcgaggtcagatttatgaggcctctgattggttcaaagaggctctccagattaac
caggaccatccagacgcctggtctctgatcggtaacctccatcttgccaagcaagagtgg
gggccagggcaaaagaagtttgagcgcatcctgaagcagccatctactgctaatgatgca
tactcgctgcttgcattagggaacgtctggcttcagaccttgcatgcaccaacccgcgac
aaggccaaggagagacgccaccaggaccgtgccctggccatgtacaaacaagtgctgagg
aatgactctaggaacctctatgcagctaatggcatagggtgcattcttgcacacaagggc
tatataagagaagcaagggatgtgttctcccaagttcgagaagccacagctgatgtcccg
gatgtgtggctcaacttggctcatatctacgtggagcagaagcaatatgtgtcagccatt
cagatgtacgaaaactgtcttcgcaaattcttcaagcatcacagtgtagaggtcatgctt
tacttggccagggcatactacagggcagggaaacttaaagactgcaagcgagtgctcttg
aaggcccgtcacgtgtctcctaatgacaccatcttgctgtttaatgtatcgctggtgcag
cagaaactcgctacaggaatcctgagagctgagaagagttcactgaaggtggtacttgga
gctgttggcgaacttgagcaggctcagaggaattttacatggctcagtcgccatggtgac
aggatgaaatttgacctcgcttgggcggcctacgagtctaggcataccagcgacttgctc
agtcaggcccagtaccatgtgtcacgcgcgcggaaactcgacgaacaggaacaagagcta
cgacgtaaacaggaggcagagaaagaagcgctcagacgaagtaaagaggaagaggagcgc
tcgcgtcaaaaggaacgcgaagagcaggagcgcctgatgctcgagaagagacagcagttt
gtagaagcgaccaagaacaagcttgtcttcaacgaggccgaaatggcggctgcagagaag
aaagctaaaggcggccgtaagagagccaaagatgacgatttcgtggatgacagttcgagc
agcagtgcggacgagggcggtgacgaggagggaggggagggtaaagtcaaggccaaaaaa
gaaaagaaggacaagaaaaggaaaaagagacggactggaggtgaaggcgaagacaaacct
aaaaagcagaggaaaccgcgggctccccgtgctccgaaggagaagaagccgcgtaaagac
aagaaatcggcagcgaatgaggaaaggctctcggcgaaacagaggatgaagatcaagtcc
aaggcgtacgtctcgtcctccgaagactcctccgattcggacaacgacaaactcaaaatc
accgatgtcggtagcgacgacgaaaaggctgagaggtcagcggtggagtcgcatgacggt
tctggccaggaggagcgggcctcgggcgacgagcgtatctctgatgcgagtcatgtgacc
agtgaggaggagatgcaggcatcagacgcggagagcgaggaaaaggagaaagatgaggag
agtagcgacgcagaagcaccttctagcagccgtaagcgagtcatatccagcgatgatgat
gatgagttggatgaaaagctagacgatgacgatgacaataacgatgatgaggaagagtcc
aagccgacgcccaagaaacgcgtcaggcagctcgctagctcatcggaaagcgacgaagag
tag
DBGET
integrated database retrieval system
