Nematostella vectensis (starlet sea anemone): 5505676
Help
Entry
5505676 CDS
T01037
Name
(RefSeq) LOW QUALITY PROTEIN: vam6/Vps39-like protein
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
nve
Nematostella vectensis (starlet sea anemone)
Pathway
nve04140
Autophagy - animal
nve04142
Lysosome biogenesis
nve04145
Phagocytosis
nve04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
5505676
04142 Lysosome biogenesis
5505676
04140 Autophagy - animal
5505676
04148 Efferocytosis
5505676
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nve04131
]
5505676
Membrane trafficking [BR:
nve04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
5505676
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CNH
Vps39_1
zf-Vps39_C
Beta-prop_WDR36-Utp21_1st
Clathrin
TPR_12
ASA1
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
5505676
NCBI-ProteinID:
XP_032229917
LinkDB
All DBs
Position
Unknown
AA seq
1003 aa
AA seq
DB search
MHDAFEHAPILEKLPLQIECIATYADCLLVGTRQGHLLLYSIKDGSGAIRFKVDLRSSNK
LFSKKPILQLTVVEELSILISLSDNVISVHNLETFALLSTLSKSKGATFFAVDLTKRKSS
SVFDPSPPFELKLCVAVKKKIQLYIWRNESFQELPPELGLPDVVRAVAWAGDSLCVGFKR
DYSLIKVNTGAATELFSTGKHLEPTIATLPNSGLILCRDDMSIITDSEGKHTQKQSLTWS
DTPMALEYVEPYVIGVLPRYIEMRTISPRALIQSIELQKPRFIAKGKHIYVASTSHVWRL
VPVALPMQIQQLLQDKQFTLALMLATPMALEYVEPYVIGVLPRYIEMRTISPRALIQSIE
LQKPRFIAKGKHIYVASTSHVWRLVPVALPMQIQQLLQDKQFTLALMLAEIVNEPATEKS
RRIESIQNMYAFELFCQKRFDESLQLFARLETDPTHVIGLFEDLLPSDFRKQLEYPDEPP
KLLMSETEKGYVALVEYLTQKRNELIKAADKAVENQKKLKNPEDELSEEDIKAQKNLKQR
RQIIDTTLLKCYLQTNDALVAPLLRLKDNNSHVEESERALMKNKKYNELVILYQTKGLHK
KALDLLLRQAQKASGPLKGHQRTVQYLQHLGPDHMKLILDFSVWVLKAHPDDGLKVCNRN
HSAKDPLIEVIKSDIILNWPACLYTSFISYIHIILIIAIVTAIGHLQEHIIFIWNEIQPR
FHNKLINCYREKVQLLTREYLDSLPEGDEPVAPGSEPGELGELRGRLLFLLETSKYYQAE
NLLTHFQESFYHERALLLGRVGRHDEALAIYIHVLQDSKLAEEXVPHIVAHVWQGSMEIS
FTVLCLVYLSLLSMYLDPPHIEGITQVTSNIPAALAILKEHHQKISTAKALELLPATIQV
REVYEFLLNVLDEKETKRKQSQVLKSLLFAEHLQIQEQRMFYQAHKIVITDERVCRECHK
RIGTSAFAFYPSGEIKHYYCYKDQSSSERSTPRHSPTPEDNRR
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atgcatgatgcctttgaacatgcaccgatactggagaaactacccctgcagatagaatgc
atagcaacctacgctgactgtttgctagtgggaacaaggcaaggccatcttcttctttac
tctatcaaagatggatcaggtgctattcgttttaaagttgaccttcgaagctctaacaag
ttattctctaaaaagccaatattgcagctgactgtggtagaagagctgagcatcttaata
agtttatcagacaatgtcatcagtgtccataacttggaaacatttgctctgctctctacc
cttagcaagtccaagggagcaacattctttgcagtagatcttacaaaacggaaatcatcc
tcagtatttgatccatcaccaccatttgagctgaagctctgtgttgcagtaaagaaaaaa
attcagttgtacatctggagaaatgagagtttccaggaattgcctcctgaacttggtctc
cctgatgtagtccgtgctgtggcctgggcaggagatagcttgtgtgttggtttcaagcgg
gactactcactcattaaggtaaacacaggggccgcaactgaactgttctcaaccggcaag
catttagaaccaaccatcgctactctacctaatagtggtctcatcttgtgccgggatgac
atgagtattataacagacagcgagggcaaacacacacaaaaacagtccttgacgtggtct
gacacgcccatggctctcgaatatgtggagccatacgtgattggtgtcctcccccgctac
attgagatgcgaactatcagcccaagagcactcattcagagcattgagctacaaaaacca
cgctttattgctaagggcaagcacatctatgtggcatccacatcacatgtgtggcgactg
gtccctgttgcacttcctatgcagatacaacagctgctgcaggacaagcaatttaccttg
gctctcatgctagcaacgcccatggctctcgaatatgtggagccatacgtgattggtgtc
ctcccccgctacattgagatgcgaactatcagcccaagagcactcattcagagcattgag
ctacaaaaaccacgctttattgctaagggcaagcacatctatgtggcatccacatcacat
gtgtggcgactggtccctgttgcacttcctatgcagatacaacagctgctgcaggacaag
cagtttaccttggctctcatgctagcagaaatcgtgaatgagccagcaacagagaagtcc
cgcaggattgagagtatccaaaatatgtatgccttcgagttattctgccagaaacgcttt
gatgagtcactccaactctttgcacgcttggaaactgacccaacacatgtgattggactt
tttgaggaccttcttccatcagatttccgcaagcaattggaataccctgatgaaccgcct
aagctcttgatgagcgagacggagaagggctatgtggcgttggtcgagtatctcacccag
aaacgtaatgaactgattaaagccgctgataaagcagtggaaaaccagaaaaagttgaaa
aatcctgaagatgagttaagtgaagaggacatcaaggctcagaagaacctaaaacagagg
cgccagattatcgacaccacgttattaaaatgttacttacagacgaatgatgctcttgtt
gcgccacttctgcgtctaaaggacaacaacagtcatgtggaagaaagtgagcgagccctg
atgaagaacaagaaatacaatgagctggtcatcttgtatcaaactaaaggacttcacaaa
aaggccctcgacttgctgttacgacaggctcagaaagccagcggtcccctgaagggccac
cagcgtactgtccagtacctccagcatttggggccggaccacatgaaactcattttagat
ttctccgtctgggtcctgaaagctcaccccgatgatggtctcaaggtatgcaatagaaac
catagcgccaaagaccctcttattgaggttattaagtccgacatcatattgaactggccc
gcatgtctctacacctcattcatatcttatattcatatcattcttataatagccatagtt
acggccattggtcatttgcaggaacacattattttcatttggaacgagatccagccgagg
tttcataacaaactgattaattgctacagagaaaaggttcaactgttgaccagggagtat
ttggactcgttgcctgaaggggatgagcctgttgcccctggtagtgagccaggagagctt
ggggagctccgaggaagactcctcttcttgctggagacgtctaagtattatcaggccgag
aaccttctcacgcatttccaagagtctttttatcacgagagggcgctattgctaggccga
gttggtcgacatgatgaagctttggcaatctacattcatgtgctacaggactctaaacta
gctgaagagtgagttccccacatagtagcgcatgtatggcaagggtcgatggaaatatcc
ttcacggtactctgtttggtatacttgtcactcctgagtatgtacctggacccnccacac
attgaagggatcactcaagtcacatcaaacatacctgcggccctagccatactcaaggaa
caccatcaaaaaatcagcactgcaaaggcacttgaactcctcccagccacgatccaagtt
cgagaagtgtatgagttcttgttaaatgtactggatgaaaaggagaccaagcgaaagcag
agtcaagttctaaagagccttttatttgcagaacacttacagatacaagaacagcggatg
ttttatcaagcccacaagattgtgattacagatgagagagtctgccgagaatgccataag
cgtatagggacaagtgcatttgctttttacccaagtggagaaatcaaacattattactgc
tacaaagatcagtcatcatctgagcgaagcacaccgcgacacagcccaacaccagaagat
aacagaagataa
DBGET
integrated database retrieval system
