Nematostella vectensis (starlet sea anemone): 5505709
Help
Entry
5505709 CDS
T01037
Name
(RefSeq) protein SMG7 isoform X1
KO
K14409
protein SMG7
Organism
nve
Nematostella vectensis (starlet sea anemone)
Pathway
nve03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
5505709
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nve03019
]
5505709
Messenger RNA biogenesis [BR:
nve03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
5505709
mRNA cycle factors
Common to processing body (P body) and stress granule
5505709
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
TPR_17
Motif
Other DBs
NCBI-GeneID:
5505709
NCBI-ProteinID:
XP_032229928
LinkDB
All DBs
Position
Unknown
AA seq
709 aa
AA seq
DB search
MYVIPRLQDLYKRILLNDLELALDKKIEQDLWNSAFKSQIDFLRQKARDKKCTSKNEVQA
VLTLFLETASGFYIQLLQELCMTYDLDLPGHARSSHLGLLDDGDVNSSSKRPHTQSCYYV
CQDCLVHLGDIARYCDDATQAEVFYRHALVLVPSNGQPYNQLAILASARGDHLGTVYFYC
RSIAVKNQFPAASTNLHKTFNKISSCHNTHSSSLSMGAISKAEFIHLFLQFHSAIYLVQD
LSEAKKLQIRLVEEFKVVLRQNLLSSGELVRLLTICLFTLFHIRTGGAEELEEFDCISKD
EEESWIMGLELTVEMFIASVCWAIDHLQEDDQPRDNSLLTLPLISVFCQWVAANASSLWR
EDLVKEERVWSNFASLLNLLPAKLNFNPETCDIPLKEDWELHSFLPLRSAHRKLSFTIHK
SKVEDEMAHRINRLIKFGTRLASNFPRVLSKVEDLSTGLAHFSLRTDSSSPDNEVREQMV
ACEIKSPQSPHDLDLDLMGPKLLPSSPLPHQKSSSPTPFAETSSLFNSCSDGAAGGVQEH
QPVTGPSPVAQYSLFQSGWRAPLASALHGGVPGAPTLVPIQRPAPSVPSPTGRVPHLDQI
PHVPSGPSSLPSSPGEPLISRGTVPGLPMSASQQVFVGPSPGPLGGFGLSGGWGSGVWGP
VPSTSVPIVNNNPPPPPTQAIWGSDFSAQGLSPLQQLLQEQQKLNQNGT
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgtatgttatcccaaggctccaagacctgtacaagaggatcctgttgaatgaccttgaa
cttgctctggataagaaaatagagcaagacttgtggaatagtgccttcaagagtcagatt
gatttcttgagacaaaaagctagggacaaaaagtgcacaagtaagaatgaagttcaagct
gttctcactcttttcctggaaactgccagtggtttctatatccagcttttgcaggagttg
tgtatgacatatgacttggatctacctgggcatgcacggtcgtcacatcttgggcttctt
gatgatggagatgttaacagctcgtccaaacgtccacacacccagtcttgttactatgtg
tgccaggactgcctggttcatcttggagacattgctcgctattgtgacgatgccacgcaa
gctgaggtgttctaccgtcatgcacttgtgctcgtgccatcaaatggtcagccatacaac
cagcttgcaatcctggccagtgcccgcggtgatcacctaggaacggtttacttttattgt
cgaagcattgcagtgaagaaccaatttccggcggcttctaccaacctgcacaagacgttc
aacaagatatcctcttgccacaatacgcacagttcgtctttgtccatgggtgcaatttcc
aaggcggagtttattcacctgtttctgcaatttcatagtgccatctacctcgtacaagac
ttgagtgaggcgaaaaagctgcaaattcgtttggtagaagaattcaaggtcgtccttcga
cagaatcttttatcatccggggagcttgtccgcctgcttaccatctgcctcttcacgctt
ttccacatccgtacgggtggggctgaggaactggaggagtttgactgtataagcaaggac
gaagaggagagttggatcatgggactggagcttacagtggagatgtttatcgcgtccgta
tgctgggccattgaccaccttcaggaggatgaccagccacgggacaattccctcctaacc
ctaccactgataagtgtgttttgtcaatgggtagctgctaatgcaagctctctgtggcgg
gaagacctcgtcaaggaggaacgagtttggagcaattttgcgtctctcctgaacctgctg
cctgcgaaattaaacttcaaccctgaaacctgtgatattccattgaaagaggactgggaa
ctgcatagctttcttcccttgagatcggcacacaggaaactgagcttcactattcataag
tcgaaagtagaggatgaaatggcacacaggataaaccggttaatcaagtttggaacccgt
ctggctagtaactttccaagggttctctctaaagtggaagatctctcgacgggtctggcg
catttctcacttcgcaccgactcctctagtcctgacaatgaggttagggaacaaatggtt
gcttgtgaaatcaaatcgccccaatctccgcacgacctggacctcgatctgatgggtcca
aagctcctcccgtcctcacccctaccgcatcagaaatcctcatcgccaactccctttgcc
gagacaagctccctgttcaatagctgcagtgatggcgcggcaggtggtgtccaggaacac
cagcctgtcacaggcccgtcaccagtagcgcagtactctcttttccagtcaggttggcga
gcccctctcgcctcagccctccacggtggggtaccaggtgccccgacgcttgttcctata
caaagacctgcaccatcagtcccttcacccacaggacgagtacctcacttggaccagatc
ccacacgtgcccagcggcccgagctcccttcccagcagcccaggagagcccctcatctct
aggggcacggtcccaggtcttcccatgagtgcttctcagcaggtgtttgtgggcccttcc
ccaggccctctcggcggatttgggctgagtggtgggtggggttctggtgtctggggccca
gtacccagtacgagcgtgcccatcgtgaacaacaatccaccaccaccaccaacacaggcg
atctgggggtctgacttctcggcccagggcctctcgccccttcagcagcttctacaagag
cagcagaagctgaaccaaaatggcacgtga
DBGET
integrated database retrieval system
