Nematostella vectensis (starlet sea anemone): 5505947
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Entry
5505947 CDS
T01037
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4 isoform X1
KO
K10615
E3 ubiquitin-protein ligase HERC4 [EC:
2.3.2.26
]
Organism
nve
Nematostella vectensis (starlet sea anemone)
Pathway
nve04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
5505947
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nve04121
]
5505947
Enzymes [BR:
nve01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
5505947
Ubiquitin system [BR:
nve04121
]
Ubiquitin ligases (E3)
HECT type E3
5505947
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Motif
Other DBs
NCBI-GeneID:
5505947
NCBI-ProteinID:
XP_032230184
LinkDB
All DBs
Position
Unknown
AA seq
1066 aa
AA seq
DB search
MFCWGKCSEGQLGVGETEQEFISTPRLLENLEFSSNVREVSCGWNHTAFLCKDGTVYTCG
SNEFGQLGQEKSHTNPESVHAIETFTITKVTCGKAHTVAVSDQGLVFAWGDNSYGQIGLG
SKVKEKVQTIPKMLKGLAKMSVVQIACGCNHSMALTISGHLFCWGDNSSGQLGIGKTHSS
MSEPAPVLSLNGVPFMLISAGGAHSFALSSSGALFGWGKNEYGQLGVHDTTDRPLPTLLK
SLRSQGVCYVSCGEKHTAVLTSDGGVFTFGCGTSGQLGHNSNHHEYTPRKVFELMGSVVT
QIACGRAHTLALVPSSGRVYTFGRGGDGQLGLGVTNNCNSPMTAKGPWLRSNNIKSMLPE
ADGDSVVYTVRRIDAGGDHCFAMASSYGDETDGPEDMRLPRPSQSILHLSVPVTMDLVKR
ATIASDLSDVSEKLEIIFSSLACLNGSFLDKQTHKGVSSRSHGIELSAVRKSFTMLGTIP
SKETRNMIVSCISNFLLPAMVQQQPPDIEALRVYLMLPENGIMLDKECFMEVVIPFADSI
LRLSPEAQKVLRRWWSTLPSTYFSRVIQVFQECVKYLLTLPLPHFANEELIKRQVYLGMC
MVALDNLHKVNNESGDIVPFKQFTFPRTREVDIRADYFNWIQNQIVGFLQDFPSLYRNVN
TFSFCRFPFVFDASAKTKLLQTDAVMQMQSAVDEVNRRNVQSLLSFVPVNPVNPCLVIKV
RRDSIVQDTLTQITTQSPYDLKKPLKVIFANEEAVDAGGVKKEFFLLLLTEILDPKYGMF
TYLEDSQTIWFNDLTFEESPMFLLIGVICGLAIYNSTIFDLRFPPVLYKKLLRKKPNLDD
FRGFQPSVARNLQYLLDYSDDDLEDTFGLNFQIMREKYGALEYIDLVPGGGEVPVTQDNR
EQYVELYIDYYLSKAVDKQFEAFFTGFHRVCGGHVLEFFHPQELMEMVVGCQEYDFEVLE
KITEYKGEYYRKHPVIANFWTVFYEFPLSMKKKFLAFLTGSDRVPILGMESMKMIIQPVA
GGEHGDHLPVAHTCFNLLDLPRYPTLEMMRTKLSQAVEFSKGFGLA
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgttctgctggggcaagtgctcagaagggcagctaggcgtgggggagaccgagcaggaa
tttatttcaactccaagattgctagaaaatctcgagttttcgagtaatgttagggaagtg
agttgtggttggaatcacacggcgtttctttgcaaggatggtacagtttacacttgtggg
agtaatgagtttggacagttgggccaagagaaaagccacacaaatcctgagtcagtgcat
gccatagagaccttcaccatcaccaaggtgacatgcggcaaggcacatacagtggccgtc
agtgaccagggactcgtatttgcctggggggacaacagctacggacaaataggacttggg
agcaaggtcaaggagaaagtacagaccattcctaagatgttaaagggattagccaagatg
tctgttgtacaaatcgcatgcggatgcaaccattctatggcattaacaattagtggtcat
ctcttctgctggggcgataactcctcaggtcagctgggtattggcaaaacccacagctcc
atgtcagagcctgctcctgtcttgtctcttaatggtgtccccttcatgctgatcagtgcg
ggtggtgcacacagctttgccctttcctcatccggtgccctgtttggctggggaaagaat
gaatatggtcaactgggagtccatgacactacagatcgccccttgcccaccctacttaag
tcgttgcggtcccaaggggtttgctatgtctcctgtggagagaagcacactgctgtttta
acaagtgatggaggtgtatttacgtttgggtgtggtacgtcagggcaacttggtcacaac
tctaatcatcatgaatatacacctagaaaagtttttgaattaatggggagcgttgtgaca
cagatagcctgtggcagggcacacacactagctttagttccctcttccgggcgggtgtac
acctttggccgtggaggggatggtcaacttggccttggtgtaacaaataactgcaacagt
cctatgacggcaaaggggccatggcttaggtctaataacatcaagagcatgttaccagaa
gctgatggtgactcagtcgtatatactgtcaggagaattgatgcaggaggagatcattgt
ttcgcaatggcatcgtcttatggggatgaaactgatggcccggaggacatgcgtctgccc
cgcccatcccagtccatcctgcacttatctgtgccagtcaccatggacctagtcaagagg
gccaccatagcctctgacttgtccgatgtatctgagaaattagaaatcatattctcttca
ctagcatgcctgaatggatcatttctggacaagcaaactcacaaaggtgtcagttcccgc
agtcatgggattgagttatcagctgttcggaaatcatttaccatgctaggcacaatacca
agcaaggagacacgtaacatgattgtgtcgtgcatatccaacttcctgttaccggccatg
gtacagcagcagccgcctgatatcgaggctctgcgtgtctacctcatgttacccgagaat
ggcatcatgcttgataaagagtgcttcatggaggttgtcatcccgtttgctgacagcata
ttacggctctcgcctgaggcacagaaagtcctacggcggtggtggtctacgttaccatcg
acatacttctcccgagtaatacaggttttccaggaatgtgtcaaataccttctgacgctc
cctctgccgcattttgcaaatgaagagttgattaagcggcaagtgtacctgggcatgtgt
atggtggcactggacaatctacacaaggtgaacaacgagtctggtgatatagtgcccttc
aaacagttcacattcccgagaacaagagaagttgatatcagggccgactacttcaactgg
atacagaaccagattgttggctttctgcaggatttcccctccttgtaccggaatgtgaac
acgttttcgttttgccgatttccatttgtgtttgacgccagcgcaaaaaccaagctgcta
cagacagatgcagttatgcaaatgcagtctgctgtcgacgaggtgaaccgccgcaatgtg
cagtccttgctctcgttcgtacctgtcaacccggtgaacccttgcctggtcatcaaggtg
cgccgggatagcatcgttcaagacaccctgacacagatcaccacacagagcccgtatgac
ctcaagaaaccgctcaaggttatatttgcgaacgaggaggctgtcgatgctggtggagta
aaaaaggaattcttccttcttttgctgacggagattcttgaccccaagtacggcatgttc
acctacctggaggactcgcagacgatctggttcaatgatctgacattcgaggagagccct
atgttcttactaattggggtcatctgtggtcttgctatctacaactccaccatcttcgac
ctgcgtttccctcccgtgctctataagaagctgctccgaaagaaacctaacttagacgac
ttcagaggtttccaaccttccgtggccagaaatctgcagtatctattggactactcagat
gacgacttggaggatacattcggattgaatttccagattatgcgggagaagtatggtgcc
ctggaatacatagatctggtccctggtggtggagaggtacctgttacccaggacaacaga
gaacagtatgttgaactgtatattgactattacttgagcaaagctgtggataagcaattc
gaagccttttttacaggctttcatcgtgtttgtggaggccatgtattggaattcttccac
cctcaggagctcatggaaatggtggtgggatgccaagaatatgatttcgaagtgttagaa
aagatcaccgagtacaaaggcgagtattacagaaaacatccagttattgcgaatttctgg
accgtgttctatgaatttccactgagtatgaagaagaaatttcttgcgttcctgaccgga
agtgatcgagtgccgatccttggcatggagagtatgaagatgataattcagcctgttgct
ggtggagagcacggggatcatctaccggtagctcacacgtgctttaacctgttagacctg
ccacgctacccgacactagaaatgatgaggactaagctcagccaagctgtcgaattctcc
aaaggcttcgggcttgcttag
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