Nematostella vectensis (starlet sea anemone): 5506040
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Entry
5506040 CDS
T01037
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
nve
Nematostella vectensis (starlet sea anemone)
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nve04040
]
5506040
Ion channels [BR:
nve04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
5506040
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_5
Ank_3
Ion_trans
WD40_APC4_C-half
Sec3_CC
V-ATPase_H_N
DUF16
Motif
Other DBs
NCBI-GeneID:
5506040
NCBI-ProteinID:
XP_032230305
LinkDB
All DBs
Position
Unknown
AA seq
1115 aa
AA seq
DB search
MGSRQMSTKKMQTSFRKKQPRLSDALMSVLGETCGEELERGESFFGRASMKKADEKVMAD
ATENGIQSRSSFSRKLSTAMKLPKTRARPLNIALVQGLDISEIRRLVMTEDVNVSDEYGK
TPLHCAAHAQNVEAVELLLERRANVNVLDDREETPLHAAVRTGKIAVINALLNHPKINVN
LSGPDTRTTPLHLIAQLDHPTNLAICNSLLSNNADLLSRDSQNMLAISYSAKKGQHDMMN
CFFKYAKEQDRPLPYLLYDVDSSSSSLLHLAVTSSNSQAVAVCLKHGADVHAQRSSDETT
AVHIACSRGPYEVVKQILESVSYKFDYALTDHQGLTCLHRAAKFNHSRIVNLLLDQNVEV
NPLDDTGKTPLMCAVFRGCEKAASVLIRRNASLRVRDNHDRNVAHLAVGCNATLQLILKH
EKLDLSLVKEKDKSGSTPLHYAAKGGYPLDVELLLSRKRELASLTNANEDTPLHIAVCNG
WLNIVQLLLEGSNVRMVNWLDKNERTPLHLAAKHGHVDIVDFLLHTGASIQRDRYGQTAL
HLAAWVGSLPIVDLLLSANFFCLNQKDEKQEMALHLAVQAGHADLVEHFLNLKDQDLTVN
NIDKNILDMAIDHQHASVAMVMANSKRWREVFLPPCNGSPSQMELLVQKMPGVVEAFLDR
CIRREGKKNSPDHKITYNLHYLQGMPNYEKCIPKNSLKPLYAMVKYKRLKCLQHPTSLAL
INVKWRRYGLMLVLINQLLSILYLCFVIGLVSMLTDNPCFTSVGEQMKQCRNTTRFKELR
GDPSWPKLPTLKYFDTLKYLLVLLSIAKLLSQIVHMYTEGWRYLTKFSYLMELALCSSMI
VFLLPDDCRGCYGAGAVAACLAWFSLMSRIASVSFLGIYLMMLAKIFVTVARVFVLLFMF
LLCFAFSFYVMDFQQVLFYDIFHSLATTFVMLMGEVHYETIFLEKTTNAYIMYPLYMLFV
ICVPIIFLNLLIGLAVGDIASIQKIATLERYSAQVEQLHSIERIYPRFIVKRWQMRKYVE
YPNRTNTLARRIVDVIAGTLTTAGFEEEQRENEVEKVIDEQEQRMKTMSVQLESQTRQLE
FMKSHMERIEEKLTGSLPVRERGFTVLEQANLLRR
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atgggaagccggcaaatgagcaccaagaagatgcaaacctcgtttagaaaaaagcagcca
cgtctttccgatgcgctaatgtcagtgctcggtgagacttgtggcgaagagcttgagcga
ggagagagcttctttggacgggccagtatgaagaaggcggacgagaaagtcatggcggac
gcgactgaaaatggcattcagtctcgaagctcctttagtagaaagcttagcactgcaatg
aagttaccgaagacgcgtgcgcgacctttgaatatcgcgcttgtgcaaggattagatatc
agtgagatcaggaggctggtcatgaccgaagacgtcaacgtatctgatgaatatgggaaa
accccgcttcactgtgctgctcatgcgcagaacgtcgaggctgtcgagttgctgctggag
cgacgcgcgaatgtgaacgtgctggatgatcgcgaggagactccgcttcacgccgctgtc
cgcactgggaagatcgctgttattaacgctttgctcaaccatcccaagattaatgtgaac
ctgtcaggcccggacacccggacaacccctctacaccttatcgctcagctcgaccatcca
accaacctcgccatctgcaattcactgctgagcaataatgcggacttactgtcccgagat
agccagaacatgttagcgattagttactccgcgaagaaaggacagcacgatatgatgaat
tgcttcttcaaatacgcaaaggagcaagaccgccctttaccataccttctgtatgacgta
gactcctcgagcagctccctcctccaccttgctgtcactagtagcaacagccaggcagtc
gctgtttgcttgaaacacggcgctgatgtgcatgcgcaaaggtcttcagatgagactacc
gctgtacacatcgcttgctcacgtggaccatacgaggtcgtcaagcagattcttgagtca
gtttcttacaaatttgactacgcgctgactgatcaccaaggactcacttgccttcacagg
gccgcgaagtttaaccattctaggattgtcaatttactgcttgatcagaatgtcgaagtt
aacccccttgacgatacggggaaaaccccgcttatgtgcgccgtgttccgaggttgtgaa
aaggctgcaagtgtgttaataagacgtaacgcaagcctgagagtgcgtgacaaccacgac
aggaatgttgcccatctagctgtaggctgtaacgcaacgctccagcttattcttaagcat
gaaaagctggatctctcgctcgtcaaggaaaaagataaatcaggatcgactcctcttcat
tatgcagctaaaggcgggtatccactggacgtggaactcctcttatcaaggaagagggag
ctcgcttcactcaccaacgctaacgaggacactcccttgcacattgctgtttgcaatggg
tggttgaacatcgttcagttgcttctagaaggctctaatgtccggatggtcaactggttg
gacaagaatgaacggacccctcttcacctcgcggccaaacatggccacgtggacatcgtg
gatttcctactccacacgggcgcgagtatacagcgagatcgttacggccagaccgctcta
catctcgcggcatgggttggatcccttcccatcgtcgatttactgttatctgcgaatttt
ttctgcttaaatcaaaaggacgagaaacaggaaatggctctccatctagccgtacaggcc
ggccatgctgacttagtggagcattttctaaacttgaaagatcaagacctgactgtcaac
aacatagacaaaaacatcctcgatatggcgattgaccaccagcatgccagtgttgccatg
gtgatggccaatagcaagaggtggcgcgaggtgtttctccctccttgtaacggttccccg
agtcagatggagctgctggtgcagaaaatgcctggtgttgtcgaggcgtttctcgatcgg
tgcattcgtagagagggaaagaaaaacagcccggaccacaagataacatacaaccttcat
tacttgcaaggcatgcctaactatgaaaagtgcatacccaaaaattcgctgaagccgcta
tatgcgatggtgaagtataagcgactcaaatgtctgcagcacccaacgagtcttgctctg
atcaacgtcaagtggcggagatacggccttatgctcgtcctcattaatcaactgctgtcg
attctctacctgtgtttcgtgattggcctcgtatccatgctcactgacaacccgtgcttt
acatctgttggcgaacaaatgaaacagtgtagaaacacaactcgcttcaaagaactccga
ggcgacccttcttggcccaaactaccaaccttgaaatacttcgatacgttgaaatacctg
ctggtgttactgagtattgccaaactgctcagtcagattgtgcacatgtataccgagggc
tggcgatatctgaccaagtttagttatctaatggagctcgccttgtgcagcagcatgatc
gtcttcctgctccctgatgattgccgaggctgttatggcgcaggcgcagtagccgcatgc
cttgcgtggttcagcctcatgtcacgaatagccagtgtgtcttttctggggatatacttg
atgatgctcgccaagatctttgtcactgtcgctcgagtttttgtactgctttttatgttt
cttctctgtttcgcgttctcattttatgtcatggactttcaacaggtcctgttctatgac
attttccattcattggcgacgacatttgtgatgctgatgggggaggtccactacgagacg
attttcctggaaaagacaaccaacgcctatatcatgtaccctttatacatgctattcgtc
atctgtgtacctatcatcttccttaatttattgattggtttagccgtcggcgatatagcc
tctattcagaagattgcaactctagagagatattcggctcaggtagagcagctccatagt
attgagagaatctacccgcggttcattgtcaaaagatggcagatgagaaaatacgttgag
tatcccaaccggaccaatactttggctaggaggatcgttgacgttatagcgggtaccttg
acaaccgcaggttttgaggaagagcaacgagagaacgaggtggagaaagtgattgacgag
caggaacaaaggatgaagaccatgtcagttcagctggagtcccagactcgtcagcttgaa
ttcatgaaaagtcacatggaaagaattgaggagaagctaacaggatcacttccggtcaga
gagcgaggattcactgtactagagcaagccaacttgctccggcgatga
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