Nematostella vectensis (starlet sea anemone): 5506072
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Entry
5506072 CDS
T01037
Name
(RefSeq) nucleoporin p58/p45 isoform X1
KO
K14307
nucleoporin p58/p45
Organism
nve
Nematostella vectensis (starlet sea anemone)
Pathway
nve03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
5506072
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nve03019
]
5506072
Messenger RNA biogenesis [BR:
nve03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
5506072
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_FG2
Nucleoporin_FG
Complex1_LYR_2
NifU_N
YopJ_bacilli
K_channel_TID
Motif
Other DBs
NCBI-GeneID:
5506072
NCBI-ProteinID:
XP_032230292
LinkDB
All DBs
Position
Unknown
AA seq
571 aa
AA seq
DB search
MMEREKFKHNSKMAAATFGSGTTNTLGTGFSFGGTTTGGTGPVPFGSSTPRASGFSAIKP
LGIATTTANTSGLFATPAATKTTTGISFGATGTQATSASTGLSFGQLGNTSTSTLTAFGQ
PSTTSAPTGISFGQPTSSTGLSLGASSGLTLGGLQATTTTSGLFGAKPATTTSSLFSGAN
TSALGFGGLGTLGAKSTVATTTTVTGLGGTGSSSTLLSGATNGNTNKQGELQNLKDSPLP
DKLNEIVEHIKKYVKEQKEHRDEISRYSASTMHKVREDTIAQRQLLAVVLNSIQRDGCSV
ENLKMDVAQELKNAEICQRTSDIPPALQHENTLPQEYFHRLVESFEERMQVYKKQIDIME
SHLCSLSQGHTLTPQDLSQVMHHVHETFIALAAELHSIHEAVKIQKEHFLNYRKAYFKDP
TDVFTVRQWQVNKPNPDLGVGPSPFNTTGNTASLATVTNQGSLGNQLSSLKTTGFGGSST
GSQASSLVSNTFGSSLGTTVSGTSSLGGLASNTLGATAAGSISGLGFGAPTNTGLGASFG
VTPQATATPFGTKQKFELQRPPAGSKRGKKR
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgatggagagagagaaatttaagcataattcgaaaatggcggcagctacgtttggttct
ggaactacaaatacattggggacaggcttttccttcgggggcacaaccactgggggaact
ggtccggttccatttggttcaagtactcccagagctagcggtttttcagcaattaagccg
ttgggaattgcgacaacgacggccaacacatctggtttattcgcgactccagccgctaca
aaaactaccactggaataagttttggcgctaccggcacacaagcaacgtccgctagtact
ggactgagcttcggtcaactcggtaatactagtacttctacactcactgcattcggtcag
cctagcacaacatccgcacctacaggcatttcatttggccaaccaacgagctcgactggt
ctatccttaggcgcttcaagtgggttgacgctaggcggccttcaggcaacaaccacaact
agtggtctgttcggagctaaaccagctaccacaactagttctctttttagtggtgcaaat
acatctgctttaggctttggtggcttagggactttgggtgcgaagtcaacagtagctact
actaccactgtaactggtcttggtggaacagggtcaagctctaccctactgtctggagct
acaaatgggaacaccaacaagcaaggtgagctacagaatctcaaggacagtccattgcca
gacaaactcaatgagatagtggagcacatcaaaaaatatgtgaaggagcaaaaagaacat
cgtgatgagatatcacgttactctgcaagtaccatgcataaagtccgtgaggacacaata
gcgcaaagacagttacttgctgttgttctgaacagtatccagagagatgggtgttcagta
gaaaatctgaaaatggatgttgctcaagaacttaagaatgcagagatttgtcagaggact
agtgacatcccccctgcccttcagcatgagaacacactaccacaagaatacttccaccgc
ctggtggagtcctttgaagagaggatgcaagtctacaaaaaacagattgacatcatggag
agccacttatgctctctatcccaaggccatacattgacaccacaagatctatctcaagtt
atgcaccatgtccatgagaccttcatcgctttagcagctgaattgcattctatccatgaa
gcagtcaagatacagaaagaacacttcttaaactacagaaaagcttacttcaaagacccc
actgatgtgtttactgttaggcagtggcaagtgaataaaccaaatccagatcttggagtg
gggccttctccttttaacaccactgggaacactgcctcattggctactgttactaaccaa
ggtagcctcggcaaccaactttctagcctgaagaccacagggtttggaggaagcagtacg
ggtagccaagcgagctcgttggtatcaaatacctttgggtccagcctaggcaccactgtt
agcggcacttcctcacttggtggccttgctagcaacactcttggtgcaacagcagctggg
tccatttctgggctcggttttggggccccgacaaacacgggccttggtgcctcgtttggt
gtaacaccacaggcaactgccaccccattcggaacgaagcagaaattcgaacttcaacgc
cctcctgctggaagcaaacgaggcaaaaagagatga
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