Nematostella vectensis (starlet sea anemone): 5506907
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Entry
5506907 CDS
T01037
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
nve
Nematostella vectensis (starlet sea anemone)
Pathway
nve03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
5506907
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nve03019
]
5506907
Messenger RNA biogenesis [BR:
nve03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
5506907
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
5506907
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
5506907
NCBI-ProteinID:
XP_001627587
UniProt:
A7SLB4
LinkDB
All DBs
Position
Unknown
AA seq
793 aa
AA seq
DB search
MADKRKLQGEIERCLKKVSEGVETFEDIWQKVHNATNANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNDIKDKRTLLDNRKLIEQQMERFKVVERETKTKAYSKEGLGLATKIDPATKE
KEEARQWITDVLDRLKLEIDQFESEIELVIAGSKKKKLDKERQDRVDELNDWAEKHRFHN
QQLEMILRMLDNGTIECDDVSGQLEEIKQLKDDMDYYLECCREPDFQENEFMYDDFDLDA
DLDQDILATSPTEDDDIMNHIPTSPTSSLPPNSPTETVPMVIPTKIPNSSPRKNSKEAKT
SSNSLSGTTPPRSTPKMNVPTSLQALASSAANPVIVKSSSTISKPASSSGLVNSFENHIS
TNGEETSPVRKSPPPTTPPPPVSGYAVVAGSQQNHVESTPPRMVNHNPTATTGSNSFPRS
GSINNDHTQQNNHLTETSQALEKLGSSIASLSIAPAPSIATAAPISQLPSQPVHMSSINP
VLSSKPEPSQPTPPSSIATSQPAVSVPSGMSPALIGSLGTTPGSTPLPPPLLSNSTSSKP
PMSLAESLAASTQPVSSLISSVHLMPAPAQRHITTSDSFSSLKSIAAQAVATASLGNPMQ
GPTGFSTENRGLFESVATSSDSKPPVETNTAHLQPLLGVAPLGPVPLNKERRYQLGMLEA
AYHHLPQATDSERVRPCLSRNPYPAPHYHHQQPPSHLDAIEFFQRLSPETLFFIFYYQEG
TRAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKAITDEYEQGTYIYFDYEKWGQRKKEGF
TFEYRYLEDKDLP
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atggcagataaaaggaagcttcaaggcgagattgagcgctgcctgaaaaaagtcagtgaa
ggagtcgaaacatttgaagatatctggcaaaaggttcataatgcaactaacgcgaatcag
aaggagaaatatgaagcagaccttaagaaagaaatcaagaagctacaaagacttcgagac
caaattaaaacatgggtcgcatccaacgatatcaaggacaaacggacattgttggataat
agaaaactcattgagcaacaaatggagcggtttaaagtcgtcgagagagaaacgaaaaca
aaggcatattctaaagaaggtcttggtctagccacaaaaattgatcctgctactaaagag
aaggaggaggcaaggcagtggattacggatgtgcttgacagactaaaactagagattgat
cagtttgagagtgagattgagctggtaattgctggctctaagaagaaaaagctggacaaa
gaacgacaggatcgagtagatgaactaaacgattgggcagaaaagcatagatttcataac
cagcagttggagatgattctacgcatgcttgacaatggtaccatcgagtgtgatgatgta
agtgggcagctagaagagatcaagcagttaaaggatgatatggactattatctggaatgt
tgtagagagcctgacttccaggaaaatgagtttatgtatgacgactttgacctggatgcc
gatctggatcaagacatactagcgacatcaccaacagaagatgatgacatcatgaaccat
attccaacatcaccaacgtcatcactaccaccgaactccccaacggaaacagtgcctatg
gtaatacctacaaaaataccaaatagctccccaaggaaaaactctaaagaagccaaaaca
tctagtaatagcttatctgggacaacaccccctcgatcaacccctaagatgaatgtaccg
acatcgcttcaagcattggcatcatcggctgcaaaccctgtcatagtaaaatcaagtagc
actatctcaaagcctgcaagctctagtggtctagtgaattcatttgagaatcacatatca
accaatggcgaagagacgtcacccgtcaggaaatccccgccccctactacaccccctcca
cctgtctctggttatgcggtagtagcaggttcacagcagaatcatgtggagtccacgccc
ccacggatggtgaaccacaaccccacagcgacaacaggaagtaactcattcccaagatca
ggctcaataaataatgaccacacccaacaaaacaaccacttaacagaaacaagtcaagca
ctggaaaaacttgggtcatccatagcatctttatcaatagcaccagcaccatcaatagct
actgctgcgccaattagtcagctgccctctcaacctgtgcatatgtctagtataaaccct
gtccttagtagcaaaccggaaccatcacaacctactcctccatcaagcatcgcaacctct
cagccagcagtttctgtaccttcaggaatgtctcctgcattgataggtagtctgggtaca
acacctggtagcacgcccctaccgccgccgttactatccaactccacaagtagcaagcct
cctatgtcattagcagagtcattagctgcgtctactcagccagtgtcgtcattaattagc
agtgtgcacttaatgccagcacccgctcagaggcacatcacgacatccgactcattttct
tcgctcaagtcgatagcagcacaggcagtagcaactgcaagcttgggtaatcccatgcaa
ggtcctacaggcttttcaacggaaaacagagggttatttgagtcagtagcgaccagctcc
gacagcaaaccaccggtagaaacaaatactgcacatcttcaaccccttctaggcgtggca
cccttaggccctgtcccattaaacaaggaacgtcggtaccaactgggtatgctagaggct
gcctaccaccatctcccccaggcaacagactctgagagagtcagaccttgcttatctcgt
aacccctatcctgccccacactaccatcaccaacaaccaccgtcacacctcgacgccatt
gagttcttccagcggctatctcctgaaactctcttctttattttttattaccaagagggc
actagagcccagtaccttgcagcaaaggcgctgaaaaagcagtcgtggagattccatacc
aagtatatgatgtggtttcagcggcatgaagaacccaaggccataacagacgagtatgaa
caggggacgtacatttactttgactatgaaaagtggggacaacgcaagaaggaaggtttc
acgttcgaataccgttacctagaagacaaagaccttccatag
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