KEGG   Nematostella vectensis (starlet sea anemone): 5506916
Entry
5506916           CDS       T01037                                 
Name
(RefSeq) intraflagellar transport protein 140 homolog isoform X1
  KO
K19672  intraflagellar transport protein 140
Organism
nve  Nematostella vectensis (starlet sea anemone)
Brite
KEGG Orthology (KO) [BR:nve00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:nve03037]
    5506916
Cilium and associated proteins [BR:nve03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex A
   5506916
SSDB
Motif
Pfam: TPR_IF140-IFT172 Beta-prop_IFT140_1st Beta-prop_IFT140_2nd TPR_IF140_C WD40_CDC20-Fz WDR55 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 ANAPC4_WD40 Beta-prop_WDR19_1st WD40 Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_HPS5 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_WDR75_1st TPR_IFT80_172 EIF3I TPR_COPA_B Beta-prop_RIG_2nd Beta-prop_WDR35_TULP_N TPR_GEMI5 Beta-prop_Vps41 Hira Beta-prop_NUP159_NUP214 PPR_2 WDR54 Beta-prop_IFT122_1st NBCH_WD40 Dynactin_p22 WDR90_beta-prop_4th PROPPIN
Other DBs
NCBI-GeneID: 5506916
NCBI-ProteinID: XP_032231259
LinkDB
Position
Unknown
AA seq 1451 aa
MAVYFDHKIQAPLVGVQTLLTWHSSYPLLAVASKTEPGVNGAVNLYLDEGELVEDSSIQR
SCEVTAIKWHPSRKILAVGWQSGDLLLWNDHDHELHEAFSAHKAAIKTIEWNSSGNKLVT
GDEDGTVVGWKADQKGRLQQNPLFQHDLQSAITVCIYKSSTAGSDKEYSWQKNKVMAILQ
PPAENNFYLGTTDGNVYHIDDRGKCFQRFTVEGPVKTLLYAEGRDMLVAVTDGLMLSQHT
IAKDGSTTETIKVKLSGQASKSHLIWAGRQLLATATGENIVRMWNLEQDDNYFLSLKGQG
FEPGECINCISYNKSKDLLAGCTSKGKVAMWKHASPKVKGRKEEGEEMWELQPPSILEGE
ADLTQIEWASSKNILAVNCIATVIILNEQVMKAHFNQQVAAVQVSPSQLTIENFSTAYHQ
DLKTDIHIKGVFVTKSHTTIWNGKRVVTYEVSPDKAMVRAEGSFSSDSPVVVVYEQSVFT
AEPGKVQARTFQGTVKQILPFSEAEGDPVLLDLCGNFLVAGTSQGYVKCWDVSRREAKQH
CTPKNLTEVIANLGRLKCVKCNSSGSKISIICDQENNTPDSRLYVWDCESDALHTFDFAT
GANSEAGDPDSSDLRGQHVAEIAGRRPVAQYWDPTEPKLLVCETLRGGDSSKTPKRSMSL
LSDDKDSAQGEVMIVSLFATPEHGILLQDNFPIDASHTSLMGVEVPFFYLMNKGGTDTSE
KAPLPVMHGAVSPPPLPHHRMVTKHTMRDFTGLENANDEAKRAMMDFSYLSAIGNMDEAF
KAIKLIKSESVWENMARMCVKTKRLDVATVCLGNMRNARAAKALRESADEPELDARVAVL
ALQLGMKDEAEKLYKNSQRFDLLNQLYQASNQWTKAIEVAELHDRIHLRTTYYNYAKHLE
SMGNMSAAIVNYEKSDTHRFEVPRMLLDDPHQLEAYILKTKDKELRKWWAQYMESTSEME
TALQFYEAARDNLSLVRVYCYCGNLEKAAEICNETGDRAACYHLARQFENQDNVKDAIHF
YTRAHCYSNAIRLAKEHGLDNELMNLALLSTQQDMIDVARYYESQPNMQDKAVMLYHKGG
NISKALELCFATQQFAALQVVAEDLDEHTDPVMIDKCSAFFMDHGQYDRAVDLLVVGKKF
SDALDLCMRHNVVITEELGEKMTLPKGAENRVTMLERIAECAMHQGSYHLATKKYTQAGN
KMKAMKALLKSGDTEKIVFFAGVSRQREIYVMAANYLQSLDWRKDPEVMKNIIGFYTKGR
ALDSLAGFYDACAQVEIDEYQNYDKALGALTEAYKCMAKAKMKNATDQEEKVAFLKQRIG
FVKKFVQARRSYEEDPEESVKLCHILLEEPDLETAVRVGDIYGLIIEHYARQQNFSKAYT
VMEDMRQRVPSVNMAYYVNLKTIEAIHNAVGVPMGRGMGAEKPHKGGLDEDDGEEVEEEV
EEDIYNGHDGY
NT seq 4356 nt   +upstreamnt  +downstreamnt
atggcagtgtattttgatcataagatccaagcgcctctggtcggcgtgcaaactctgcta
acatggcacagcagctaccctttgcttgctgttgcttctaagactgagcctggagtgaac
ggagctgtaaacttgtacttagacgagggtgagctagttgaggactcgtcaattcagcgt
tcctgtgaggtaactgccattaaatggcatccaagcaggaagatccttgcagttgggtgg
cagagtggcgacctcttgttgtggaatgatcatgaccatgagctccacgaggccttctcc
gcacataaggctgctataaagacaattgaatggaactcatcaggcaacaagcttgtcaca
ggagatgaggatgggactgtagtgggatggaaggctgaccaaaaaggcagattacagcag
aatcccttgtttcaacatgacttgcagtctgccatcacagtctgcatctataagtcatcc
actgcagggtctgacaaggagtattcttggcagaaaaataaagtcatggcaatacttcaa
cccccagctgaaaacaacttctaccttggaacaacagatggtaatgtgtatcatattgat
gatagaggcaagtgcttccaaaggtttacagtggaaggtccagtcaagactcttctttat
gcagagggtagagacatgcttgtagctgtcactgatggattgatgctatcacagcacacc
atagctaaagacggaagcactactgaaaccattaaggtgaagctgagtgggcaagcatca
aaaagccatttgatatgggctggtcgacagcttctagcaacagccacaggagaaaatatt
gtcagaatgtggaacttggagcaggatgataactatttcttgtccctcaaaggccaaggc
tttgagccaggagaatgtataaattgtatatcatacaataaatcaaaagatcttcttgct
ggctgtaccagcaagggcaaggtagctatgtggaagcatgcctcccctaaagtcaaagga
agaaaagaggaaggtgaagaaatgtgggaattacagcctccttctatactagagggagag
gcagatctcacacaaatagagtgggcttcaagtaaaaatatcctggctgtcaattgcatt
gcgacggtcatcatactgaatgagcaggttatgaaggcacattttaatcaacaggttgct
gcagtgcaagtttcgccaagtcagttaacaattgagaacttcagcactgcctatcaccaa
gatctgaagacagatattcacatcaaaggagtctttgtcactaagagccatacgaccatc
tggaatggcaagcgcgtagtgacttatgaagtttcacctgacaaggctatggtcagggcc
gaaggttcctttagctcagattcccctgtagtggtagtctatgaacagagtgtcttcaca
gcagaacccggaaaagtccaagccaggaccttccagggtacagtgaagcaaatcttacca
ttctcagaagcagagggagacccagtattgcttgacttatgtgggaatttcttggttgct
ggcacgtctcagggctatgtcaaatgttgggacgtctctaggagagaagcaaagcagcac
tgtactccaaaaaacctgacggaggtgatagcaaatcttggccgactgaagtgtgtcaag
tgcaacagcagtgggagcaagatcagcatcatatgtgaccaggaaaacaacacgcctgac
agcagattgtatgtgtgggattgtgagtctgatgctctacacacctttgactttgccact
ggagcaaactcagaggcaggagatcctgatagctctgatcttcgaggccagcatgttgca
gagattgccgggcgacggcccgtggcacagtactgggacccaactgaacccaaattgctg
gtctgtgagactctgaggggaggggacagtagcaagacgcccaagaggtccatgagcttg
ttatcagacgacaaggattctgcacaaggggaagtcatgatagtttctttgttcgccaca
ccagaacatggcatactattacaggacaacttccctattgatgcttctcacacaagtctg
atgggtgtagaggtcccattcttctaccttatgaacaagggtggcacagacacaagtgaa
aaggcacctctgccggtcatgcatggcgcagtctctccgcctcccctgccacaccaccgt
atggtcaccaagcacaccatgcgagacttcacaggcctagagaacgccaatgacgaggcg
aagagagcaatgatggacttcagctatctgtcagctatcggtaacatggatgaggcattc
aaggctatcaagttgatcaagagcgagtcagtttgggagaacatggcacgcatgtgcgtc
aagacgaagcgactggacgtagctactgtgtgtctggggaacatgcgcaatgcacgcgcg
gccaaagccctgcgcgagagtgcagatgagccggagcttgacgcccgagttgctgtgctt
gccctccagcttggcatgaaggatgaggcagaaaagctctacaaaaacagtcaacgcttt
gacctgctgaaccaactttaccaagcaagcaaccagtggaccaaggctattgaagttgcg
gagcttcatgaccgcatccacctgcggacgacatactataactacgccaagcaccttgag
tccatgggcaacatgtctgctgctatcgtcaactatgagaagtccgacacacatcgcttt
gaagtaccccggatgttactggacgatcctcatcaattagaggcttatattctcaagacg
aaagacaaggaactgcgtaagtggtgggcccagtacatggagagcacaagtgagatggag
accgccttgcagttctacgaggccgcccgggataacctttcccttgtcagggtctattgt
tactgtggaaatctcgaaaaggccgctgaaatctgcaatgagactggcgatagagcagca
tgttatcatcttgctcgacagtttgagaatcaggacaatgtaaaggatgcgatccacttc
tacaccagagcacactgctacagcaatgccattcgcctagctaaggaacacggcctagac
aatgagctgatgaacctcgcacttctcagtacccagcaggatatgattgacgtcgcaagg
tattacgaatcccagcccaacatgcaagacaaagcagttatgctttaccacaagggtgga
aacatcagtaaagccttggagctatgtttcgccactcagcagttcgccgcacttcaggtg
gttgccgaagaccttgacgagcacacggacccagtgatgattgacaagtgttctgcgttc
ttcatggatcatggccagtacgacagggcggtcgacctgcttgtggttggcaagaagttc
tcggatgcgctcgacttgtgcatgaggcataatgttgtgatcacggaggaactgggcgag
aagatgacgctacccaaaggtgcagagaaccgtgtgacgatgctagagcgcatcgcagag
tgcgccatgcaccaagggtcttaccaccttgccaccaagaaatacacgcaggccggcaac
aagatgaaggcaatgaaggcgctgctcaagtcaggagatacagagaagattgtgttcttt
gcgggtgtgtcccggcagcgggagatctatgtgatggcggccaactaccttcaatcactg
gactggcgcaaagacccggaagtcatgaagaacattatcggcttctacacaaaaggccga
gctctagactcactcgcaggcttctacgacgcatgtgcacaggttgagattgacgagtac
cagaattatgacaaggcgcttggcgcactgactgaggcgtacaagtgcatggcaaaggcc
aagatgaagaacgccacggaccaagaagagaaggtcgccttcctcaagcaaaggatcgga
tttgtcaagaagtttgtccaggccagacggtcgtatgaggaagaccccgaggagtcggtc
aaactctgccatattcttctggaggagcctgatttagagaccgctgtacgagtaggtgat
atctatgggctcataattgagcattacgcccgccagcagaacttctcaaaggcgtacacg
gtgatggaggacatgcggcagcgcgtccctagcgtcaacatggcctactatgtcaatctc
aagacaatagaagctatccacaatgccgtgggggtccccatggggagaggaatgggtgcc
gaaaagccgcacaaagggggactggacgaggatgacggcgaggaagtcgaggaggaagtg
gaggaagacatctataatggacatgatggatattga

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