Nematostella vectensis (starlet sea anemone): 5507090
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Entry
5507090 CDS
T01037
Name
(RefSeq) endoribonuclease Dicer
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
nve
Nematostella vectensis (starlet sea anemone)
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nve03036
]
5507090
Chromosome and associated proteins [BR:
nve03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
5507090
microRNA pathway
RISC loading complex
5507090
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
Dicer_dimer
ResIII
DEAD
PAZ
Helicase_C
Dicer_dsRBD
Dicer_PBD
SLFN-g3_helicase
Cas3-like_C_2
RM44_endonuclase
DUF6709
Dicer_platform
Motif
Other DBs
NCBI-GeneID:
5507090
NCBI-ProteinID:
XP_032231423
LinkDB
All DBs
Position
Unknown
AA seq
1516 aa
AA seq
DB search
MSSDEEELSDAKGEAESKLLDGLTPRPYQSELVRIALEKNIIVCLGTGTGKTFISVMLIK
ELSFQVRKSRKEGGKRTFFLVNTVPLAKQQKEVIAKNTDLKVKEFIGDMGVDFWSDEQWK
KELDDNQVLVMTAQIFLDLLGHARLRLSDVNLIVFDECHHARKGHPYKQIMGYFEESDYP
RILGLTASIINTKETHKMEQLICELEATMRAACQTSDDITVSQFATRPEEIIYPYSNDKT
EVEQDLNQLLVETVLNPWQEFVDDLRASGQKEVLKGVKSLISDCRQILDEMGASAANRVA
EYFLKDLERVQGLVVANDDVIWLYQYCATQLRRFREIYSVHTIAHEVSEEDDLTHLSPKA
KALVEILKQYGNPQASTPDISLCGIVFVERRYTAKILCEQLNIIATRDPSLEFIKCDFVV
GHGASGINSSSDTQMGSTKQEKVLKMFRKHQINLLVATSVVEEGLDVPKCNFVVRFDFPQ
NFRSYVQSKGRARAKNSAFIVLVEDKDSEWAGLEVERYQETENYLQEKCQGRPLPTSEEC
EQANEDQYLQPYVTSLGARLTQRNSLSFLLSYCSKLPGDQYTRLMPEIITEEVEGAFRST
LMLPINCPLRDTIEGIVMPRKMLSRQAAAYEACKRLHQMGEIDDNLRPVVSLSEESDEGT
ESEDDDKSKGKTGTKKRRRCYNRKIPDVLKESLPTAGAAYWFYSIDIKSPETRRAPVELG
TLWNMGIMLRKPLPAIRRFQLFLDSGPVIVSIKPCDSTPTPSVPGFHLRIIEAFSRCLLS
RALRMPLEVTADKLHGYHVVLLDSACKGIDLARMRDVERQMEKIDLPIRDQDALDSLASG
DTIITPKHREKQQRYVLERVCPELNXTSPFPDRSKARTYAEYYEKTYDCHITDMHQPLLQ
VRNMSERINFLVNRKKQSRKKSNHVVHFIPELCSHDAIPASLLSNAQILPSVLHRMTSFL
LAVELREKIKSKSDVIDEACAPENTLSVIGGVPASVIGRSLSPLRKKRSPPRVRSYDLFD
KEFQEISQSLQAMFSNERTVLLHPDSELLLQALTTKSAGDAFDLERLEMLGDAFLKQAVS
IFLYCCYKDGDEGKLTKRKTSQLSNRALYRVACRLGLPEYLQNTQLDRVSWTTPSLQAAE
VEPVGSPGKSQKTASNKRCQSASRQPENRPEMSTLEKPETARDKALHQSIPDKSVADSVE
ALIGAYLTTCGYQGALHFLDWLGVKVLPESPMSTDGPRASSKYSIFTRPTIAEYNPNPQV
LKRFAVQLQGFEKRIGYEFSNKLYLIQALTHASYSQNRLTDCYQRLEFLGDALLDFLVTE
LIYSRNTNLDPGELTDLRQALVNNNIFAEIAVKHGFNKSLFQMSPEWFNKIGVFVDHVKE
REARGIQISKDPFLTLSNDDEEGIEAPKVLGDIFESVAGAIFLDSGMDLVLTWRVYYRML
KPYIDAYSADVPKNPVRLIHEKDADALFSEAKVLPSGKVECSLTVYWGNFQGRAANKRNA
KMAASKLALSALQPSR
NT seq
4551 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtgacgaagaggaattgagcgatgccaaaggcgaagctgagagcaagttactc
gacggtttgacgccaaggccttaccaaagcgagttagtacgtatcgctctagagaaaaac
atcattgtttgccttggtacaggcacgggaaagacttttattagtgttatgctgataaag
gaactcagttttcaagttcggaagagtcgaaaggaaggaggaaaacgaacatttttctta
gtcaacacagttccattagccaagcagcagaaggaagtgatagccaaaaacacagacctg
aaagtgaaagagttcatcggagatatgggagttgacttctggtcagatgagcaatggaaa
aaagagcttgatgataaccaggttcttgtgatgactgcacagatattcttggacctactc
ggccacgcccgcctcagactctctgatgttaatcttattgtctttgatgaatgccaccac
gcaagaaaaggacatccgtacaaacagattatgggatactttgaagagtctgactacccc
cgaattcttggactaacagcttcaataatcaacaccaaagaaacacacaaaatggagcaa
ctaatttgcgagcttgaagcgacaatgcgtgcggcctgtcagacttcagatgacatcact
gtgagtcagtttgctacaaggccagaggagattatatatccatactcaaacgataaaacc
gaagtcgaacaagatctgaatcagcttttggtagaaacagtactgaatccttggcaagaa
tttgtggatgatttgagagcgtcaggtcagaaggaggttctcaagggtgtcaagagtctg
atcagcgattgccgccagattcttgatgagatgggagcgtcagctgctaacagagtggca
gaatacttcctcaaagatcttgagcgagtgcagggcttagtcgttgcaaatgatgacgtc
atatggttgtaccagtactgcgcgactcaactgagaaggtttcgagagatctattctgtc
cataccatcgcacacgaagtgagcgaggaggacgatctgacacacctatcacccaaagcc
aaggcgcttgtggagatcctaaagcagtacggcaaccctcaagcatcgactccggacatc
agcctgtgtggtatagtctttgtagagcgccgatacacggccaagattctttgcgagcag
ttgaacatcatcgctacacgtgacccatcgctcgagttcatcaagtgcgacttcgtggta
ggacacggcgcgagcggtataaacagctcgagcgatacgcagatgggatctaccaagcaa
gagaaggtcttaaaaatgttccgcaagcaccaaatcaacttgctggtcgctacgagtgta
gtagaggaagggcttgatgttccgaagtgtaatttcgtagtgcggttcgacttcccgcag
aattttcgatcgtacgtgcagtcgaaggggcgagcgagggcgaagaattcagcttttatc
gtccttgttgaggataaagacagtgaatgggcaggtctggaagtcgagcgttatcaagaa
actgagaattacctgcaagagaaatgccagggacgaccgctgccaacaagtgaggaatgt
gagcaggctaatgaagaccaatacctgcagccttatgtgacgtcactaggcgccaggctc
acgcagcggaacagccttagctttctactaagctattgctccaagcttccaggtgaccag
tacaccagactgatgccagagatcatcacggaggaagtggaaggtgcatttcgctcgaca
ctcatgctaccaataaactgtcctttgagagacacgatcgaaggtattgtcatgcctcgt
aagatgctgtcgcgtcaggccgccgcttacgaagcgtgcaagcgcttgcaccagatgggc
gaaatcgacgataacctgaggcctgtggtgtccttgtccgaggagagcgacgaggggact
gagagcgaagatgacgacaagagcaaagggaagactgggaccaaaaaacgcaggcgttgc
tataatagaaagatacctgacgtactaaaagagagtctaccgacagcgggcgctgcatac
tggttttattccatcgatatcaagagcccggagacaaggagagcccccgtggagctgggt
accctgtggaatatgggtattatgctgcgcaagccccttcccgcgattcgtcgcttccaa
ttattcctggactcgggaccagtgatcgtgtccatcaagccatgcgactccacccccaca
ccctccgttcctgggttccatcttcgcatcattgaggcattcagccggtgtctgctatca
cgggctctgcgcatgcctctcgaggtgaccgctgacaagcttcatggttatcacgtggtt
cttttggactcggcgtgtaaggggattgacttggcgcgcatgcgcgatgtagaaagacaa
atggagaaaattgaccttcctatccgagaccaagatgcgttggacagcttagcaagcggc
gacacgatcattacccctaagcaccgcgagaaacagcaaagatacgtactggagagagtc
tgccctgagctgaatcncacgagtcctttccctgaccgaagcaaagcgcgcacgtacgcg
gagtactacgaaaagacatacgactgccatatcacggacatgcaccaaccgttattacag
gtacggaacatgtctgagaggatcaacttcctggtcaaccggaaaaaacaatcaagaaag
aaatcaaaccacgtggttcactttatcccagagctatgctcccatgatgcaattccggcg
tcattgctaagcaacgcgcagattctcccgtccgtgctgcataggatgacgtcatttctc
ctcgcagtggaactgagggagaagataaaatccaaaagtgacgtcattgatgaggcttgt
gcgccggaaaacacgttgtctgtgattggtggagttcccgcgtctgtgattggtagatca
ttaagtccactaagaaagaagcgatcaccccctcgagttcgttcctatgacctcttcgat
aaggaattccaagaaatcagtcaaagtctacaggcaatgttctccaatgagcggacagtc
ctccttcatccggactccgagctccttttgcaagcgctgaccacaaagagcgcaggcgac
gcgttcgaccttgagcgtcttgagatgctgggggacgcattcctgaagcaggcggtgtcc
atcttcttgtactgttgctacaaggacggggacgaggggaagctcaccaagcgcaagacc
agccagctcagcaaccgcgcgctctaccgggtcgcgtgtagactggggctaccggagtat
ctgcagaacacccagcttgaccgcgtgtcctggaccacgccctccttgcaagctgctgag
gtcgagcctgttggtagtccggggaaatcacagaaaacagccagcaacaaaagatgtcag
agtgcaagcaggcaaccagaaaacagaccggaaatgagcaccctggaaaagcccgaaaca
gcacgtgacaaagccttgcaccagtccatcccggacaagtctgtggctgatagtgtcgag
gctctgattggtgcttatttgactacatgcgggtaccaaggcgcattgcacttcctggac
tggctaggggtcaaggttttaccggagtcaccgatgagtacagatgggcccagagcgtcc
agtaagtactccatcttcactcgccctaccatcgccgagtacaacccaaacccccaggtc
ctcaagcgcttcgccgtccagttgcaaggctttgaaaagcgcattgggtacgagtttagc
aacaagctgtacctgatacaagccctgacgcatgcctcgtactcgcagaacaggttaacc
gactgttaccaacggctggaattccttggcgatgccttgcttgacttcctggtcacggag
ttgatctattccaggaacacgaatctggatcctggtgagcttacggatctgcgtcaagct
cttgtcaataataacatcttcgcagagatcgccgtcaaacacggatttaataagagcttg
ttccagatgtctcccgagtggttcaataagatcggagtcttcgtggatcacgtgaaggaa
agagaggctcggggaattcagataagcaaggatccatttctgactctctctaatgacgac
gaggaggggatagaggcgcctaaggtcctgggcgacattttcgagtcagttgcgggtgcg
atctttctggacagcggtatggacctggtgctgacgtggcgcgtgtattaccgcatgctg
aagccatacattgacgcatactcggctgacgtaccgaaaaaccctgtgcgactgattcac
gagaaggacgccgacgccctcttcagtgaagcgaaggttttgcccagtggcaaagttgaa
tgctcgctgacagtttactggggaaatttccaaggacgagcggcgaataagcgaaatgcc
aagatggcggcgtccaaacttgccctatcagcacttcagccaagtcgatag
DBGET
integrated database retrieval system
