Nematostella vectensis (starlet sea anemone): 5507192
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Entry
5507192 CDS
T01037
Name
(RefSeq) transcription elongation factor SPT5
KO
K15172
transcription elongation factor SPT5
Organism
nve
Nematostella vectensis (starlet sea anemone)
Pathway
nve03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
5507192
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nve03021
]
5507192
03019 Messenger RNA biogenesis [BR:
nve03019
]
5507192
Transcription machinery [BR:
nve03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
5507192
RNA polymerase I system
5507192
Messenger RNA biogenesis [BR:
nve03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
5507192
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW1_SPT5
KOW4_SPT5
KOW
KOW5_SPT5
KOW7_SPT5
KOW2_Spt5
Spt5-NGN
KOW6_SPT5
KOWx_SPT5
Spt5_N
GPKOW_C
RimP_C
Motif
Other DBs
NCBI-GeneID:
5507192
NCBI-ProteinID:
XP_032231609
LinkDB
All DBs
Position
Unknown
AA seq
1024 aa
AA seq
DB search
MSDSDDALLSDEEGEDITREDDDDEEEEDDDEDFEDEDDYDDEYDEDEGSSARRKRRRES
GFILEEADVDDEYEDDEEAEKGYSDLIDTGTAEDRVEDDVSGARRLQQMLRERKDDEIEE
YYRKKYAETNDRYYSANELQPEVQQQSLLPGVKDPNLWTIKCKIGEEKATVIGLMRKALA
QQFTDEPLQIKSAIAVEGLKGYIYIEAFKQTHVKQAIEGFGTLRLGKWQQKMVPITEMTD
VLKVVKEVVTVKPKQWVRLKRGIYKDDLAQVDYVNTARNQVTLKMIPRIDYARTRGIPKS
AEDPEKRKRKRKPPQKLFDADSVRSVGGDISQDGDFMLFEGGRYRGGFLYKTLAMSAIVT
EGIKPTLQELERFEAAPEDVELELPVKSSKDSDEVQHTFAVGDAVEVIEGELKNLRGKII
SVEGEKITIMPNHEDLKDALDFPAHELGKHFKMGDHVKVIGGRYEGDTGLIVRVEDHVVL
FSDLTMHELKVLPKDLQLCSDRSSGVDSMGQHQFGDMVQLDPQTVGVIIRLDRDTFMILN
QHGKVIQVKHQAVTKRRENRSAVALDAEQNTIQVKDIVRVVDGPHLGLQGEIKHLYRSFA
FLYSKMVIENSGIIVCKTRHVVLAGGGKNATTGFGGFGTFAPASPRISSPARDGGGGGNV
RGGGQSPRAVGRGRGRGGRDTSLIMQTVRICQGPYKGYIGIVKDATETTARVELHSNCKT
ISVDRSRLAHVSGPAKVGASLHSRTPMYGSQTPGSQTPSYAASRTPMYGSQTPTHDGSRT
PHYGGSMTPSHDPSRTPLHGGAWDPTLPNTPARNDDFDYGFDASTPSPAAGYAPNTPNPA
TPGGYGGPYTPNTPGPAMYGSEPTYSPYTQSPSPAGYANPMTPGGGLPPVSPAYNPHTPG
AGLEEPSTSGPGEWVTTDIEVRINENYEDPQLLDKVGVVRDVVGGVCTVYLPDEGRSIST
VGAHIDAVQPDKQDKVKVIVGDYRERTGTLINIDDKDGIIKMDRPEELKILPLDYLAKLA
SSSA
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatagtgacgatgcacttctatcagatgaggagggtgaagatattacacgtgaa
gatgatgatgatgaggaggaggaagatgatgatgaggactttgaggatgaagatgattat
gatgatgaatatgatgaggatgaaggcagtagcgctcgccgcaagaggagaagggagtct
gggtttattttagaggaagctgatgttgatgatgagtatgaggatgatgaggaagcagaa
aaaggctatagtgacttgattgatacaggaactgccgaggatagagtagaggatgacgtg
tcgggagcccggcgattacagcagatgctaagggagcgaaaggatgatgagattgaggag
tattacagaaagaagtatgcagagaccaatgacaggtactacagtgccaatgaactgcag
cctgaggtccagcagcaatctttgctcccaggagtcaaggatccaaacttgtggacaata
aaatgcaagattggagaagagaaagcaactgttattggcttgatgagaaaggcgctggca
caacaattcacagatgagccactccagatcaagtctgccattgctgtagaaggtctgaag
ggttatatctatatagaagcattcaagcagactcatgtcaaacaggcaatagaagggttt
ggtaccctgcgacttggcaaatggcagcagaagatggtgccaatcacagagatgacagat
gtgctgaaggtggtaaaggaggtagtcactgtgaagcccaagcagtgggtgcggcttaag
agaggcatctacaaggatgacctcgctcaggtagactatgtcaacacagcaaggaatcaa
gtcacattgaagatgatcccaagaattgactacgcaaggacaaggggcattccaaaaagt
gctgaggacccagaaaagagaaaacgcaagagaaaaccaccacaaaagctgtttgatgct
gattcagtgaggtcagtaggcggggatatcagccaagacggggacttcatgttgtttgaa
ggaggtcgctatagagggggattcctgtacaagacgcttgctatgtcagccattgtcact
gaaggaatcaaaccaacattgcaagagctggagaggtttgaggctgcaccagaagacgta
gaacttgaattacctgtaaaatcttccaaagacagtgatgaagtccaacatacatttgct
gtgggtgatgctgtggaggtcattgagggagagttgaaaaacttgagagggaaaatcatc
agtgtagagggtgaaaagatcaccatcatgccaaaccatgaagatctcaaggatgcacta
gatttcccagcacatgagcttggcaagcactttaagatgggtgaccatgtgaaggtgatc
ggaggacggtatgagggagacactgggctgatagtcagagtggaggatcacgtcgtcttg
ttctctgatcttaccatgcacgagctcaaagtcctccctaaagaccttcagttatgctca
gaccgcagtagtggagtggattctatgggtcagcatcagtttggagacatggtccagctg
gatccccagacagtgggtgtgataatccgattggatcgggacaccttcatgatcctcaac
cagcacggcaaagtgatccaagtgaagcaccaggcagtgaccaagaggagagaaaacaga
agtgcagtcgccctcgatgctgaacagaatacaatacaagtgaaggatattgtaagagtt
gttgatgggccacatttgggtcttcagggcgaaatcaagcacctgtatcgaagcttcgct
ttcctctactccaagatggttattgagaacagcggtattattgtttgcaagacaaggcat
gtggtcttagctggcggaggaaagaatgcaacaacaggatttggtgggtttgggacattc
gctccagcctcaccaagaatttcaagtcctgctagggatggtggtggtggtggtaatgtg
cgtggagggggccagtcccctagagccgtagggcgtggtcgaggaagagggggccgagat
acttcacttattatgcagaccgttagaatctgccaagggccctacaaaggttacattgga
atcgtcaaggacgcgacagagaccaccgccagggtagagcttcatagtaactgcaagact
atctctgtggataggagtcgcttagcgcatgtcagcggtcctgcaaaggttggcgcttcg
ttgcatagccgtaccccgatgtacggttcgcagacgcccggttctcaaactcctagctac
gccgcatctcgtacgccgatgtatggctcccagacccctacacatgacggaagccggact
cctcattatggaggttcgatgacgccatcccacgatccctcacgcactccattgcacggt
ggagcctgggacccgactctgcctaacacgcctgcgcgtaacgatgacttcgactacggc
tttgatgcgtccactccatcgcctgctgctggctacgccccgaacacccctaacccggcc
acacccggaggctatggtggcccttatacccctaatactcccggcccggccatgtacggc
tcagagcctacctactccccctacacgcagtcgccatcccccgccggctacgcgaacccc
atgaccccaggtggtggcctcccgcccgtatcaccggcctacaacccgcatacccccggg
gcaggcctggaggagccgtctacttccggtccaggggagtgggtcacgacagacattgaa
gtgcgaataaacgagaactatgaggaccctcaattactggacaaggtgggcgtggtgcga
gacgtcgtcggaggggtgtgcacggtgtacctgcctgatgaagggcgcagtatcagcacc
gtgggtgcacatatcgacgccgtacagccagacaagcaggacaaggtgaaggtgattgtc
ggcgattaccgcgagcgcacaggtaccctgatcaacatcgacgacaaggacgggatcatt
aagatggacagaccggaagaactcaaaatcctgccgcttgattatctcgctaaacttgct
tctagctccgcctga
DBGET
integrated database retrieval system
