Nematostella vectensis (starlet sea anemone): 5507609
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Entry
5507609 CDS
T01037
Name
(RefSeq) probable ATP-dependent RNA helicase vasa-like isoform X1
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
nve
Nematostella vectensis (starlet sea anemone)
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nve03036
]
5507609
Enzymes [BR:
nve01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
5507609
Chromosome and associated proteins [BR:
nve03036
]
Eukaryotic type
Gene silencing
piRNA pathway
5507609
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCHC
DEAD
Helicase_C
zf-CCHC_2
zf-CCHC_3
RRM_1
TM1266-like
Motif
Other DBs
NCBI-GeneID:
5507609
NCBI-ProteinID:
XP_032232164
LinkDB
All DBs
Position
Unknown
AA seq
1208 aa
AA seq
DB search
MSWPSVTDNSRMMNGGSHFGGYGGRADNRQTEHKVYAANIPVSMTQESVEALFSKHGHVI
SARILPPKQGRNSTVAFIGYATEEAALDAISALTGCELGGRYPLRVSWPANKNKPQPSGG
GGGGGDCHQCGEAGHFSRECPNKGNQGFSQEQSRPSPFASQEHNQTSPFARTMDDNAPSK
SSLFGGPSSNTPHPNQLGSSFVQPNQNNTFMSMLGRGESMGQAPPSRPGGLHNYNAPQSV
GYLQSSKQGYDQQGFQQGQAPGYSSHIGNDQQHIPHQQGKTEDYHKGPSYNQPVFNGGYQ
GPQNQGFTGNQYSQQPQQGYNQPSNPGYQEPPTMNVGQMTQQGYQSDSQGYQQQNQGFQQ
QNQGYQQHDQGFQQQNQGYQQQNQGFQQQNQGYNQQLTSSTYQEPSSKDYSQSNGPSTDS
PYQKSPFGYGSSGTTGRSDRGGGGACHRCGQEGHFSRDCPNPPTRQGNGRACHKCGEEGH
FARECPNQPSQGDGRACHKCGEEGHFARECPNQPSQGGGRACHKCGEEGHFARECPNQPS
QGGWCLTCHKCREEGHYARDCPNQPSQGMGGGGACHKCGKEGHFSRECPNQDSQRIGGGR
NCHKCGQEGHFSRECPNQAIQGIGGGRACHNCRQEGHFSRECPNQANQGSGTCHKCGEVG
HFARECPTGRGQSDTCHKCGETGHYSRECPTLGNGGLDPNRPPPITYIPPELPDNIDLLF
QDAPHTGIKFDNYENIPSKVSGENQPPKITSFNELPFGEQLMANISRAGYRRPTPVQKAA
LPIVMAGRDLMACAQTGSGKTAAYMLPVLTSLIKQGLNAPPRSPLALCVAPTRELAKQIY
IEARKFSDHTPIKVCVCYGGVSVPYQASQLERGCHFLVGTPGRLQDFVSREKIYLGSIQH
LILDEADRMLDLGFGPDIHKLIEESNMTAKESRQTLMFSATFPDEIQHLAGSFLKPDYLF
LAVGRVGGTNLDITQHVITVNGSEKRDKLHEILSATGTDRTLVFVELKRVADFLAAWLSQ
NNFPTTSISSDRCQSEREAALRDFRDGRANILVATSVAARGLDIPNVKHVINYDLPQDIE
EYVHRVGRTGRIGNEGKATAFYEVGRDDRLARSLVKVLSEALQEVPAWLDEAAEVAFGTS
YGPAGGRYGSKDTRERGSGGRGQYQGNMQSITTGISNLQVKTSPSSFQAPRQYSQPQAAH
EEDDEDWN
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atgtcttggcctagtgtgacggataactcgaggatgatgaatggaggctcacattttggt
gggtatggaggacgagcagataaccggcaaacagagcataaagtgtacgctgcaaatatt
cctgtctccatgacacaggaaagtgttgaagcgctgttctcaaagcatggtcatgtgatc
tctgcaaggattctcccacccaagcaaggcaggaacagcactgtggcgtttatcggctat
gccacggaggaggcagccttagacgccatcagtgctctgacagggtgtgaactaggtggc
aggtaccccctaagggtgtcatggccagcaaacaagaacaagccacagccgtcaggtggc
ggtggagggggaggagactgtcatcaatgcggagaagccggacacttctccagagaatgt
ccaaataagggcaatcaaggtttcagccaggagcagtccaggccaagtccatttgccagt
caggaacacaatcaaaccagtccttttgccagaacaatggatgacaacgccccatctaag
agtagtctatttggtgggccctcatccaatacacctcatccaaatcagttaggcagcagt
tttgtccagccaaaccagaataatactttcatgtctatgcttggtcggggtgagagtatg
ggccaggccccaccctcccggcctggtggacttcataactataatgcacctcaaagtgta
ggttacctacagagctccaaacagggctatgaccagcaaggttttcagcagggccaagct
cctgggtattctagccatataggcaatgaccagcaacatattccacatcaacagggaaaa
actgaggactatcacaagggtccttcttacaaccagcctgtcttcaatggcggctaccag
gggcctcagaaccagggtttcacaggaaaccagtacagccagcaaccccagcagggatat
aaccagccatctaatccaggttaccaggaaccaccaacaatgaatgtgggacagatgaca
cagcagggttatcagtcagatagccaagggtatcagcaacagaaccaagggttccagcaa
cagaaccaagggtatcagcaacacgaccaagggttccagcaacagaaccaagggtatcag
caacagaaccaagggttccagcaacagaaccaaggatacaaccagcaactaacttccagt
acctaccaggaaccttcctctaaggactactctcaaagtaatgggccaagtactgatagc
ccatatcaaaagtcaccatttggttatggcagctctgggaccactggcaggtcagataga
ggtggtggaggagcatgccatcgctgtggccaagaagggcatttctctagggattgtcct
aacccacctacacgccaaggcaatggtagggcatgtcataaatgtggagaggaaggccat
tttgcaagggaatgtcctaaccagccttcccaaggcgatggtagggcatgtcataaatgt
ggagaggaaggccattttgcaagggaatgtcctaaccagccttcccaaggcggcggtagg
gcatgtcataaatgtggagaggaaggccattttgcaagggaatgtcctaaccagccttcc
cagggagggtggtgtttaacatgccataaatgcagagaggaaggacattatgcaagagac
tgtcccaaccagccatcacaaggaatgggtggtggcggagcttgtcataaatgcggaaaa
gagggccacttttcgagagagtgcccaaatcaagacagccaacgtataggtggtggcagg
aattgtcataaatgcggacaagagggtcacttttccagagagtgcccaaaccaagccatc
caaggtataggtggtggcagggcttgtcataactgcagacaagagggtcacttttccaga
gagtgcccaaaccaagccaaccaaggcagtggcacctgtcacaaatgtggtgaggttgga
cactttgccagagaatgcccaactggtagaggtcaaagtgacacatgccataagtgtgga
gagactgggcactactcacgcgaatgccccaccttgggtaatggtggattggatcccaac
agacctcccccaattacctatattcctcccgagctaccagacaacattgatctgctcttc
caagatgcaccacacacgggcatcaagtttgacaactatgagaacattccatctaaagtg
tcaggagaaaaccagccaccaaaaatcacttccttcaatgagctgccattcggggagcaa
ttaatggcgaacattagccgggcaggttatcgcaggcctactccggtacagaaagcagcc
ttgcccattgttatggcagggagagatttgatggcctgtgctcaaacaggatcaggcaaa
acggcagcatatatgctccccgttctcacaagcctgatcaagcaagggctgaatgcccct
cctcgctcaccgctggctctttgtgtcgcccccacccgggaactggccaaacagatatac
attgaagcacggaagttctcagaccacaccccaatcaaagtgtgtgtatgttacggagga
gttagcgtgccatatcaggcctcgcagcttgaaagagggtgccattttctggtgggcacg
cctggccgactccaggactttgtttctagagaaaagatttacttgggaagtatccagcat
ctgatcctagatgaggcggaccgcatgctggacctcggctttggccctgacatccacaag
cttattgaagagtccaacatgactgccaaagagtccagacaaacgcttatgttcagtgct
acattcccagatgagatccaacatctagcaggatccttcctcaagccagattacctcttc
ctagccgttgggcgtgtcggggggactaacctggacatcacccagcacgtgattacagtg
aatggcagcgagaagagggataagcttcatgagatcttatcagcgactggcaccgaccgc
actcttgtcttcgttgagttaaaacgcgtagcagactttttagccgcatggctctcccag
aacaatttccctactaccagcatcagcagcgatcgttgccaaagcgagcgagaggcggcc
ctccgggacttccgcgacggacgcgcgaatatcctcgtcgccacttcggtggctgctcgt
ggccttgacattccgaacgtgaagcatgtaatcaactacgatctcccgcaagacatcgag
gagtatgttcaccgtgtcggcaggacgggaaggattgggaacgagggtaaagccactgca
ttttacgaggtcggccgggatgatcgactggcgcgaagccttgtcaaagtcctgagcgag
gcccttcaggaggtacccgcttggcttgatgaagcagctgaggtcgcgttcggcacaagt
tacggaccagcagggggcagatatggctctaaggacaccagagagcgcggcagtggtgga
cgtggccaataccaaggcaatatgcaaagcatcaccacaggtatctcgaacttacaggtc
aagacaagcccgtcctcgttccaggccccaaggcagtactcgcagccgcaggcagcacac
gaggaagatgatgaagactggaactag
DBGET
integrated database retrieval system
