Nematostella vectensis (starlet sea anemone): 5507691
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Entry
5507691 CDS
T01037
Name
(RefSeq) mRNA-decapping enzyme 1B isoform X1
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
nve
Nematostella vectensis (starlet sea anemone)
Pathway
nve03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
5507691
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nve03019
]
5507691
Messenger RNA biogenesis [BR:
nve03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
5507691
mRNA degradation factors
5'-3' decay
Decapping complex
5507691
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
DUF6291
Motif
Other DBs
NCBI-GeneID:
5507691
NCBI-ProteinID:
XP_001628318
UniProt:
A7SJ89
LinkDB
All DBs
Position
Unknown
AA seq
390 aa
AA seq
DB search
MADNSLSWTSTPELKLNLNAIKKCDQFVVNIIDTASQVALYKFNSETQAWEKTEVEGALF
VYSRSSHPKTAFFIMNRLNMNNIMEPITRSMEFKMQDPFLLFRNKTSGIFGIWFYAGSEC
VRLSDLLIRLSSEEPQVRPPSEPDLNKKEKPQGEPNGKVDIMQMFAKAQEKYDKEKSSNK
SEANAQEQKPTIEEQKQQQSEQLQQLLRGPEPSRKTRSYSTPVAPSPSVSTSGMSIVTYC
QDNGPLGLLQAMTNTKQASCTQPGRPVEEQPSESPRTGAQRKLFGGDKTATSNTITAALS
TLQTSQDTPQKSMEQAANAASLMSPMAFKAPPKVSAAPSPIKPLPPKLEISPLTADQMAQ
SMTYLLKNDPDFVRKLHEAYLKSLHELLPT
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaacagtttgtcttggacgtcgacgccagaactcaaacttaaccttaacgcc
atcaagaaatgcgaccagttcgtggtaaatattatcgacacggcgtctcaagtcgctctg
tataaattcaattctgagacacaggcttgggaaaagacggaagtagaaggagcattattt
gtatatagcagatcaagtcaccccaagacagcgttctttataatgaacagacttaacatg
aataacatcatggaacccatcacaagaagcatggagtttaagatgcaggacccgttctta
ctttttagaaataaaacaagtggtatttttggaatatggttttatgctggctcagagtgt
gtccgattatcagatctccttataagacttagctcagaggaaccccaagtcagaccccca
agtgaacctgatttgaataaaaaggagaaaccacaaggagaaccaaatggaaaagtcgat
ataatgcaaatgtttgcaaaagctcaagaaaagtatgataaagaaaaatcaagtaataag
tcagaagcaaatgcacaagaacagaagcctactattgaggaacaaaaacaacagcaaagt
gaacagctccaacaacttctaagagggccagagccaagcaggaagacacgctcatactct
acaccagtagcaccttcaccaagtgtttccacctccggcatgtctatagtaacatactgt
caagataacggaccattagggctccttcaagccatgaccaataccaagcaggcatcatgt
acccagccaggaagaccagttgaggaacagccatcagagagtccaagaacaggggctcag
agaaagttatttgggggagataaaactgcaacaagtaatacgataactgctgctctctct
actttgcagacaagtcaggatactccgcaaaaaagcatggaacaggcagcgaatgctgct
tcactgatgtcacccatggcattcaaagcccctcccaaggtctctgccgcaccttcaccc
atcaaacccttgcccccaaagctagagatctcccccctgacagcagaccagatggctcaa
tctatgacttacttattgaagaatgatccagattttgtaagaaaattgcatgaagcatac
ctgaagagcttacacgagttactccctacatag
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