Nematostella vectensis (starlet sea anemone): 5507974
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Entry
5507974 CDS
T01037
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit gamma-1
KO
K05635
laminin, gamma 1
Organism
nve
Nematostella vectensis (starlet sea anemone)
Pathway
nve04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
5507974
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_N
EGF_laminin
EGF_LMN_ATRN
Laminin_B
F5_F8_type_C
F5_F8_type_C_2
TAF6_C
Motif
Other DBs
NCBI-GeneID:
5507974
NCBI-ProteinID:
XP_032232586
LinkDB
All DBs
Position
Unknown
AA seq
1623 aa
AA seq
DB search
MDVCLRVSFCLCSRGAASLVLLALLGALTPHSSVGQLQIQCYDSQGRAQRCMPQFGNAAF
GKRVISNNTCGDPPKKFCVQTGVLEVRKECEMCNSSDPALEHPALKITDIKDDTNRTWWQ
SETLLENPDKPVTLTLDLGKSYDVSYIRIRFRSPRPESMAIYKKTTPSSKWIPYQYFSAT
CEKTYGVTTNGIVDPRNQQVALCTDAFSTITPLTGGNVAFSTLEDRPDAYNFDNSPALQE
WVTAVAVRIHLRRMNTFGDEVFGDPNVLRSYYYAIIDLSIGGRCKCNGHASECEETRLWD
GQTRLQCKCQHDTEGVDCERCKPLYNDRPWARASSRNANECVRCNCNGLAESCVFDEALY
RQTGHGGRCQNCKQNTDGPNCERCKENFYRKTSLEPCVACGCNPVGSVSLQCNSEGQCRC
KPGVTGIKCDKCQANYFGFSQTGCRPCQCFGPGTDPAKTQCNEKGECTCKRHVVGAKCTL
CRSGYFGLEASNPHGCKQCFCYGHSTVCKAAPGYTSRNITTDFTTGLEGWAVENDQGKDV
TEQYAAHSSAGFVSVTAIGKESLFARASLVYIGNRRSSYGQTFGFMFRVGTVDGMQVDNG
DITIEGEGGLKITTQLTAQGNPKPGVAFQQYRYRLHEDASFGWRPSLTSHDFQRLLTSIK
SIKIRMNYADQGTGMLDGMFFESAVYDPTSPNQVNWVEQCSCPKEYKGNNCEQCKDGYTR
QAGSTDRYAQCVPCQCYGHSDTCDPVTGKCNCKHNTTGIRCDKCIDGYYGNPTQGTPDDC
KKCPCKFGTRCIQIGANVVCTDCPEGHVGNLCDMCQDGYYGDPMGKRGAPTTCQKCNCSG
NIDPNAIGSCDRLTGDCLKCIHNTRNGPISQCELCAIGYYGNATHYPKPQCKACECYVQG
TVSPPGHDPTLPFPCDDKGRCTCLPNVSGDKCDTCRPEYWNVASGKGCEPCNCDTTGSWN
NTCSVTTGQCHCKPGVTGRRCDQCSIDHYAFSELGCLACNCNLQGSLNVTCDEQGVCQCR
PGVLGIKCDSCQENFHNLTAGCIACPPCYDVIQKIVGGLRRKLYDLIYIIDRFNTSSSVV
VDVDFEKRLALLKEQVERLLGQAEEANSTDKVLQEEIMKLNDRVTATRNKVIEIWKNTQA
AGNASRAGMSDAMMAHDSLNVSRHLLDLMKSLLMSDAARSLNESRLFANSTGEWRMREIA
EETKKLADKHENQADEITQKAVQAANASEQAVKTVDKAVEAQNQTSIDLAELRRMLGEVE
QLHVTTRANASKARDRAQNAMRDADELYKNGTAPLPDLGIDAIRAKANETKAKASEKAME
AMKILSDLKGLVTSFDAKEADVRKKMAEWPGLMDQLEKLLAAIDNANATAWDAFIKGEDT
LQKAKEMLETMQKFNEIIENSRKEAEKAEQNIPEIERLIASANAKSDNATASLGDAQQVA
GEAKDKAGQAQKTADAARMKAEKIRIEAQNLTLPTDTVSTPAKRAADKLQELKDRVGRER
DAIAAAKEKSTNATAASKRARDKIDEVLRKLNELLKEIDNLDMVDMNKLDELEKKLDNEI
ESERKVDGALANVEDTHRIIRERITEYTVDLERLKKQMAQVQNVINSMPDTCKKRITKSE
GRG
NT seq
4872 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgtgtttgcgagtttcgttctgcctgtgctctcgtggtgccgccagcctcgtt
ctactcgctctccttggcgctcttaccccacacagttctgtcggacaactgcagattcaa
tgttatgatagccagggccgggctcagcgatgtatgcctcagttcggtaacgccgcgttc
ggtaagcgggtcatatctaataatacttgtggggacccgccgaagaagttctgcgtacag
acgggagtattagaggtccgcaaggagtgtgagatgtgcaactcatcggaccccgcgtta
gagcacccggcgctgaaaatcacggacatcaaggacgatacgaatcgtacatggtggcag
tctgagactctgcttgagaaccccgacaaacccgtgacactaactctagacctgggcaaa
tcctacgatgtgtcgtatatacgaatccgattccgatccccgcggcccgagagtatggca
atctacaagaagacgactccatccagtaaatggatcccgtaccagtattttagcgcgact
tgtgagaagacttatggggtcacgaccaacgggattgtagacccgaggaaccaacaagtc
gcattatgcacggacgcgtttagtaccatcacccctctgacaggcggcaacgttgcgttc
agcaccctagaagatcgacccgacgcgtataacttcgacaactctcccgcactgcaagag
tgggtcaccgcggttgccgtgcgaattcatttgcggcgaatgaacacattcggtgatgaa
gtgttcggggatccgaatgttttacggagctactattacgctattattgatctgtctatc
ggagggcgatgcaagtgtaatggccatgcctcggagtgtgaggagacccgcttatgggac
gggcagacccggctccagtgcaaatgtcagcatgacactgaaggggttgactgtgagagg
tgcaagcccctctacaatgacagaccatgggcgcgagcgtcttctaggaatgccaacgaa
tgtgttcgctgtaattgtaacggtctggctgagagctgtgtgtttgacgaggcattgtac
cgacaaacgggacatggcggacgatgccaaaactgcaaacagaacacggacggtccgaac
tgcgagcgatgtaaggagaacttctaccgtaagaccagccttgagccgtgcgtggcgtgt
ggatgcaaccctgttggctcggtctctctgcagtgtaacagtgaaggccagtgcaggtgt
aaaccgggcgttactggaatcaagtgtgacaaatgccaggcgaactacttcggcttctcg
cagactggatgcagaccttgccaatgttttggccccggcactgacccagccaagacccaa
tgtaacgagaaaggtgaatgcacgtgcaagcgtcacgtggtcggtgccaagtgcacgctt
tgccggtcgggatactttggtctggaggcgagcaacccacatggatgcaaacagtgcttt
tgttacggtcactccaccgtctgtaaggccgctcccggctacacgtcacgtaacatcacc
acggatttcaccacaggtctggagggatgggccgtggaaaacgatcaaggtaaggacgta
acggagcagtacgctgcgcacagctccgcagggtttgtcagcgtaaccgccatcgggaaa
gagtcgctgttcgctcgggcctcgcttgtgtacatcggcaaccgacgaagcagctacgga
cagacgttcggttttatgttccgtgttggtaccgtggacggtatgcaggttgacaatggc
gacatcacaatcgaaggcgaaggcggactcaagatcaccacccaactcaccgcacagggt
aaccccaaaccgggcgtggcctttcagcagtaccgctaccgcctgcacgaggacgcctcc
ttcgggtggcgtcccagcctgacgtcacatgactttcagcgccttctcaccagcatcaag
tccatcaagatccgaatgaactacgcggatcagggaaccggaatgctggacggaatgttt
tttgaatcggcagtgtacgatccaacatctccaaaccaggtgaactgggtggagcagtgc
agctgccccaaggagtacaagggaaacaactgcgaacagtgtaaagacggctacacgcga
caggcgggctctactgacagatatgcacagtgcgtgccttgccagtgttacggccattcc
gacacgtgtgaccctgtcaccggaaaatgcaactgtaaacacaacaccacaggcatccgc
tgtgacaaatgcattgacggttactatggcaaccctactcaggggacccctgacgattgt
aagaagtgcccttgcaagttcggcacgcggtgcattcagatcggcgctaacgtggtgtgc
acggactgccccgagggtcacgtgggcaacttgtgtgacatgtgtcaagacggttactat
ggcgacccaatgggaaagcgtggcgcaccgaccacttgtcagaaatgcaactgtagcggt
aacatcgaccctaacgccattgggtcatgtgaccgcctcactggggactgcctcaagtgc
attcacaacacgcgcaacggacccatcagccagtgcgagctatgcgctatcggttactat
ggaaacgccactcactatcctaagccacagtgcaaagcgtgcgagtgttacgtacagggt
actgtttctcctcccggacacgaccccaccctccccttcccctgtgacgacaaggggcgc
tgtacatgtctgccgaacgtcagcggggacaagtgcgacacatgcagacctgagtactgg
aacgtcgcctctggcaagggatgtgagccttgtaactgcgatacaacaggatcatggaat
aacacgtgtagcgtgaccacaggacagtgccactgcaagcctggcgtgacaggcagacgg
tgtgaccagtgtagcatcgaccactacgcattctctgagctgggatgccttgcgtgtaac
tgtaacctgcaaggctcattaaatgttacgtgtgatgagcagggtgtgtgtcagtgccga
ccgggagtcctggggatcaagtgcgactcgtgccaagagaacttccacaacttgactgcc
gggtgtatagcttgtcccccatgctatgatgtcattcaaaagatcgttgggggtttacgg
cggaagctgtacgacctaatatacataatcgatcggttcaacacctcgtccagtgtagtg
gtggacgtagactttgagaagagactggcactactgaaagaacaagtggagagactgctc
ggccaagcagaagaagccaacagtacagacaaagtgttacaggaggagataatgaagctg
aacgatcgcgtgaccgccactcgcaacaaagtgattgaaatctggaaaaatacacaagcc
gctggcaacgcatcgcgggcgggtatgagtgacgccatgatggcccatgattcgctgaat
gtctcgcgtcatctgctagacctaatgaagagtctgctgatgagcgacgcggcgagatcc
ttgaatgagtcgagactctttgcaaatagcacgggagaatggcgcatgcgtgaaattgcc
gaagagacaaagaaacttgccgacaaacacgagaatcaagcagacgaaattacccagaag
gcagtgcaagctgcgaacgcttccgagcaggcggtgaagaccgtggacaaggctgttgaa
gctcagaaccagacctccatcgatctggccgagctgcggagaatgctgggagaagtcgaa
cagctgcacgtcaccacaagggcaaacgccagcaaagcacgtgaccgggcccagaatgct
atgcgcgacgcggatgaactgtataagaatggcaccgcgcctttgccagacctgggtatt
gacgctattagagccaaagcaaacgaaacgaaagcaaaggcttccgagaaagccatggag
gccatgaaaatcctgtcggatctgaaaggactggtgacgagctttgacgccaaggaagcg
gacgtgcgtaagaaaatggcggaatggcctggactaatggaccagctggagaagctcctg
gcggccattgacaatgcaaacgcgactgcgtgggatgcgtttattaagggagaggacact
ctacagaaagccaaggaaatgctcgaaaccatgcagaaatttaacgaaatcatcgagaat
tctcgcaaggaggcggagaaagccgaacagaacatccccgaaatcgagcggttgatcgcg
tccgcgaacgcgaagtcagataatgcgaccgcgtctctaggggacgcgcaacaggtcgcg
ggcgaagccaaggacaaggccggccaggcgcaaaaaaccgcagacgccgcgagaatgaaa
gccgagaagattcgaatcgaggcgcagaatctcactctgcctacagacaccgtcagtacg
cccgcaaaacgagcagcggacaaactacaggagcttaaggacagagtcgggagagagcga
gacgcgatcgctgccgcgaaggaaaaatccaccaacgctacggcggccagcaaacgcgcg
agggacaagatagatgaggtccttcgcaagctgaacgagctgctgaaagaaatcgacaac
ctcgatatggtggacatgaacaagttggacgaactcgagaagaagctggacaacgagatc
gagagcgagcgcaaggtggacggggcactggcgaacgtggaagacacgcaccggataatc
cgcgagaggatcacggaatacacggtggacttagagagactgaagaagcagatggcgcaa
gtccagaacgtgattaattctatgccagatacatgcaagaaacgaattaccaagtcagag
gggcgaggctaa
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