Nematostella vectensis (starlet sea anemone): 5507977
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Entry
5507977 CDS
T01037
Name
(RefSeq) laminin subunit gamma-1
KO
K05636
laminin, beta 1
Organism
nve
Nematostella vectensis (starlet sea anemone)
Pathway
nve04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
5507977
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
Laminin_B
EGF_LMN_ATRN
ArAE_2
Motif
Other DBs
NCBI-GeneID:
5507977
NCBI-ProteinID:
XP_001628564
UniProt:
A7SIF6
LinkDB
All DBs
Position
Unknown
AA seq
1855 aa
AA seq
DB search
MRGLGMVLFLLTVSKVNSECFENEKYDDVQTCVPEPRFAAKMKHRAVSSTSTCGSPPSEY
CRVKPLNGCFKCNASSPTERHPIEYIADKSPGSDATFWQSETWWDWYQKNPRDDLKVNVS
ISFNKTYDITGHIMFTFESPRPSKAILEKSFDKGQTWDPLQYYSFNCRKDFGMENTDPTE
NRFGDFSAKCTEKYSSSSPQQNGKVTFDFLRRYNKASFFDTQVQQYLSATDLRLRMEYPG
TDGLEVAKDEVTLKQYYYAVSDLEVIARCKCHGHARWCDFPHETGKNCDCLHNTTGDDCE
RCLPLFNNKTWMPATSETEPNPCERCECHSHADSCTYSQQEGYGTCDDCYHNTEGHFCER
CKDKFYRNMSLSLNHPEICPDCNCFPQGITNNGTCNQTTGQCECRANVTGRQCDSCADTF
WGYTLEPIGYCTECLCVGNGTVNASFNCDQYNGQCSCKPNVHTRTCQECKHGYWDFPKTL
DTDCKRCDCDYGGSVLQICSKTTGSCMCRTNIIGTRCTDVTTGYFTPSFSYLTFEAEEAT
GDYMQASNTLDLDMFFSGTGYGRITPGQYINFQARVDVNWKWFLMLRYTDLATGADSLQI
HISAEAAGNCSGVNMTVMNVTGLLAGQGLAWRAATPIVMCPGQTYNFNVTFSPGSSVNAS
IDVDSLVILPDVTESRVYKVAAAEGVAHGFDSDTIRQCWNNWTTISTIVTSQPICSKNIS
FSVMSEVFHGAMACGCDSVGTYLNSTCDRYGGKCQCKPGVTGRTCDKCKPGFYNFTSSGC
APCDCVSTGSHHLVCNAVSGQCPCKPGVITRTCSRCNDSFYGYTTGSGCVECRCNMSGSA
DAQCDDVTGNCTCKNSTDGAKCAECRFGFYNFTSAGCQACNCHEGGSQSQQCNLQTGICT
CKSNALGEKCESCRPGTYHSDPNNPDGCTPCYCFGRSNTCTSASGFVRSYIKVDLGSPFS
IDWTFVQRDVSMARVSQGRNFSFVTSGNMTLGTKVNFTKNQLNSYGELLEMKLKYSSQGP
LNVKMFWELEKTNGGIVRFDVKPTPSPEVTSYYVRLHEANGIWKTEPNRRNASDLQELLS
DLMSITLNAQFMSNGSVLLSEIKLHSASQGIVGEKAGHVENCTCESGNYTGLSCELCNQG
FTRNRPNNSYSACSLCRCTGRSLDCDGETGQCKGCRLGSQGLYCEQCQPGVDNTTDCTQC
LPEYWGLKEGSNGCQDCDCVLPNTLYGNSTVCNATTGQCTCKEKISGRTCDRCHENAYNT
SDRGCVECPECFRQLQEHVFKLRDGIKDLQGLILRVKNGDIGDITFAQSLAAANVSVEAI
SSNAKNSSGIEGTLHQELLKLNDTLKELERVLKGRVTSELTSLEGVTMTTQQERVQIQDH
IRLTEGLVRSGYGVVTSTMQAAVDQANATDTYLKELVPRFTSQASMATNQSARQNGTGND
ITSKTSSAGALVTSADVTSLEAGLRQNMTSQLLVALEQQAQSVRRLATETNATAHALYAN
VTAVLDGASRALQAANGLGPDNAAAVLSVKRAADDAKANASSAVQRVSNLTKQYAGIVAE
TETAVRNTEATLAAVKERENAGIEMLAEAKRALAEAEAAVATAAKAHRDALEMRQILLTF
EAKANESQQLAARALASAREANQTSLRAIAYTREINASIQATLVIASQGLNMATEALRLA
SGEHQGVLNIHASATILKRESDMSPYTSDYHARTRLNATQTATNNKQAIDACAKNYSTLS
IQAKPAGEEALTSAQQASGAITTSRRSVDKVMNDVPRLQTVNTTRLNELKVEIQRLRTEF
TATDVKTINAQLRVAKDQQQEFIDRYKRQVLDLRKQVEEIKSLQRSLGVPPRGCS
NT seq
5568 nt
NT seq
+upstream
nt +downstream
nt
atgcgaggcctaggcatggtgttgttcttactgacggtttcaaaagtcaactccgagtgt
ttcgagaatgagaaatacgacgacgttcaaacgtgtgttccggagcctagatttgctgcg
aaaatgaaacaccgagcagtgagtagtaccagtacttgtgggagccctccgtctgaatat
tgccgggttaaacctctcaatggctgctttaaatgcaacgcctccagtcccacagaaagg
cacccgatcgagtacatagcggataagtcacctggaagtgatgccactttttggcaatcc
gagacttggtgggactggtatcagaaaaacccaagagacgatcttaaagttaacgtctct
atttcgttcaataaaacttatgacattacgggtcatatcatgttcacattcgaatcaccc
cgtccttcgaaagcaatactggagaagtcattcgacaagggccaaacgtgggatccgctg
cagtactactcgtttaattgccgtaaagatttcggtatggaaaatacggaccccaccgaa
aacagatttggagattttagcgctaaatgcacggagaagtacagctcgagttcgccacag
cagaacggcaaggttacttttgatttcctgagacgttataacaaagccagctttttcgat
actcaagttcagcaatacctcagtgctacagacttgcgcttgcgaatggaataccccgga
actgacggactggaggtggctaaagacgaagtcactctaaagcagtattattacgcggtc
tcggatctggaagtgattgcccgatgtaaatgccatgggcacgctcgatggtgcgatttc
ccacatgaaacgggcaagaactgcgactgcttgcataataccacaggagatgactgcgag
aggtgcttgcctttatttaacaacaagacgtggatgccggcgacatcagaaacagagccg
aatccttgcgaaagatgtgagtgccacagtcatgcggatagctgtacttacagccaacag
gaagggtacggcacctgtgacgactgctatcacaacacagaagggcatttctgtgagcgt
tgcaaagacaaattctaccgtaacatgagtctgtccctcaaccaccctgagatatgtcca
gactgcaactgttttccacaaggcatcaccaataacggtacttgtaatcagacgacagga
cagtgcgagtgccgggctaatgtcacagggcgacaatgcgactcttgtgccgatacgttt
tggggatacaccctggaaccaattggctactgtacggaatgcctgtgtgttggtaatggt
acagtgaatgcatccttcaattgtgaccagtacaacggtcagtgttcttgtaagcctaat
gttcacacacggacttgccaagagtgtaaacatggctactgggacttccccaaaaccctc
gatacggactgcaagagatgtgactgtgattacggtggctctgtgctccaaatctgcagc
aaaaccactgggtcttgtatgtgccgtacaaacatcattggcacccgctgtaccgacgtc
accaccggttacttcacccccagcttctcttatctgaccttcgaagccgaggaagcaaca
ggcgactacatgcaagcatcaaacactcttgacctggacatgttcttcagtgggacaggc
tatggtagaatcacccctggacagtatatcaatttccaggccagagttgatgttaactgg
aaatggttcctaatgctgcggtacacagacctggcaacgggcgctgactctttgcagatt
cacatctcagccgaggctgctgggaattgctcgggtgtaaacatgacggttatgaatgtc
actggtcttctggcagggcagggcttggcatggcgggcagccacacctatcgtcatgtgt
cctggacaaacatacaatttcaatgtgacatttagcccagggtcatctgtcaatgcctca
atagatgtcgactcccttgtaattctacctgatgttacagagtcccgagtgtacaaagtt
gctgcggcagagggcgtcgcccatgggtttgatagtgacaccattaggcagtgctggaat
aactggaccacaataagcacaatagtgaccagtcagcccatctgtagcaagaacatctcc
ttctctgtcatgtcggaggtgtttcatggggctatggcatgtggctgtgacagtgtcggg
acatacttgaactcaacgtgtgaccggtatggcggcaaatgccaatgtaagccgggggtg
actggaagaacctgcgataagtgcaaaccaggattctacaacttcacatcgagcggttgt
gcaccctgcgattgtgtctccactggctcacaccaccttgtgtgtaacgctgtatccgga
cagtgcccatgtaaacctggcgttatcactcgcacgtgcagcagatgtaacgactcgttc
tacgggtacaccactgggagtgggtgtgttgagtgtcggtgtaatatgagtgggtcagca
gatgcacagtgcgatgacgttacaggcaactgtacttgcaagaatagcacggatggagcc
aagtgtgcagagtgccggttcggtttttataatttcacaagcgctggatgccaagcatgt
aactgtcacgaaggaggctcccaaagccagcagtgcaaccttcaaaccggcatctgcacc
tgcaagagcaacgccttgggggagaaatgcgagtcgtgtcgtcctggtacctaccacagt
gatccaaataaccctgacggatgcactccttgctactgctttggccgctcaaacacgtgc
acttccgcttctggttttgtgcgctcgtacatcaaggtagacctagggagtcctttcagc
atcgactggaccttcgtccagagagacgtatcgatggcgcgcgtgtcacagggaaggaac
ttctcttttgtcacctcgggtaacatgaccttgggtaccaaggtgaacttcaccaaaaat
caactgaactcgtacggggagcttcttgagatgaagctgaaatattcctctcagggtccg
ctcaatgtgaagatgttttgggaactggagaagacaaacggggggatcgtacgatttgac
gtcaagccgacaccctcaccggaagtgacatcatattatgtgcgtctacacgaggcaaat
ggaatatggaagacggagccgaacagacgcaatgccagtgacctgcaagaactactgtca
gaccttatgagcataacgctgaatgctcagtttatgtcaaatggttcggtccttctctcg
gaaataaagttgcacagtgcgtcgcaaggcattgtgggggagaaagctggtcatgtggag
aactgcacgtgtgaatctgggaattacacggggctctcgtgtgagctgtgcaaccaagga
tttacccgcaacaggcctaacaactcctacagcgcatgctcgctgtgccgctgtacaggc
cgctcccttgactgtgatggtgagactgggcagtgcaagggctgcaggctcggatctcag
ggattgtactgcgagcaatgccagcctggtgttgataacacaacggactgtacccagtgt
ctgcctgagtactggggcctcaaggaagggtctaatgggtgccaagattgtgactgtgtc
cttcccaataccttatatggtaatagtaccgtgtgtaacgcaaccacagggcagtgcacg
tgcaaagagaagatctctgggcgaacatgtgaccgttgccatgagaacgcgtataacacg
tcagacagaggatgtgtcgaatgcccggagtgcttccgtcagctccaggagcacgtgttt
aagttgcgtgacggtatcaaggatctacagggtctcatcctgcgcgtcaagaacggcgac
attggtgacatcactttcgcccagtctcttgcggccgctaacgtaagcgtggaagcgatc
tcgagtaatgccaagaactcgagcggcatcgagggcacgcttcaccaggaactcctcaaa
ctaaacgacacgcttaaagaactagaaagagtcttaaagggcagagtgacgtcagaactg
acgtcattagagggtgttaccatgacaacgcagcaagaacgagtccagatccaggatcac
atcagactgacggaggggctggtgcgtagtgggtatggtgtggtgacgtcaaccatgcaa
gcagcggtggaccaggccaacgcgaccgatacttacctgaaagaactggtaccgaggttc
acgtcacaggcttccatggcaacaaaccagtccgcgcggcaaaatggtactggtaatgac
attacaagtaaaacgagctcggctggcgcactggtaaccagtgcggatgtgacgtcacta
gaggcgggactgaggcaaaatatgacgtcacagctgttggtcgccctggaacagcaagca
cagagcgtgcgcagacttgccactgaaacgaatgccaccgcgcatgccttgtacgctaat
gtcaccgctgtactcgatggggcatcgcgggctctgcaggccgcgaatggactgggtcct
gacaacgcggctgcggtgctgagtgtaaaacgggcagcggatgatgccaaagccaacgct
tcctcggccgtccaacgagtaagcaatctaactaaacagtacgcagggattgtcgcggag
acggaaacagccgtgcgcaacacggaggcaactcttgcagcggttaaagagcgggagaat
gcggggatcgagatgctggcggaagccaagcgggcgctggcagaggcggaggcagccgtg
gcaacagccgccaaggcgcacagggacgcgctcgagatgagacagatcctgctcacattt
gaagcgaaagcgaacgagtcccaacagcttgccgcgcgggccctcgcgagtgcgcgcgag
gcgaaccagacgagcctcagggcaatcgcatacacacgcgagattaacgcatccatccag
gcgacgctagtcatcgcttcacaaggtctaaacatggccacagaggcactaaggttggcc
agcggcgagcatcagggtgtgttgaatatccacgcatctgccacgatcctcaagcgcgaa
tcagacatgagcccttacacgtcagactaccatgcgcgcacccgtctgaacgccacccaa
accgccactaacaacaaacaagctatcgacgcgtgcgcgaagaactactcgactttgtcc
atacaagcgaagcctgcgggcgaggaggcactgacctcggcacagcaagcgagcggcgcc
atcaccacctccaggcggtcagtggacaaagtgatgaacgacgtcccgcgtctgcaaaca
gtcaataccacgcggctgaacgaactcaaggtagagatacaaagattacggaccgagttc
accgccactgatgttaagactattaatgcacaattacgagttgctaaggaccaacagcag
gagtttatagaccggtacaagcgtcaagtgctggacttaagaaaacaagtcgaggagatt
aagtcgttacaaagatccctaggggtacccccacggggatgtagctag
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