Nematostella vectensis (starlet sea anemone): 5508105
Help
Entry
5508105 CDS
T01037
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog 2 isoform X2
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
nve
Nematostella vectensis (starlet sea anemone)
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nve01009
]
5508105
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nve03019
]
5508105
Protein phosphatases and associated proteins [BR:
nve01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
5508105
Messenger RNA biogenesis [BR:
nve03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
5508105
mRNA cycle factors
Stress granule specific factors
5508105
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
dsrm
Staufen_C
Dicer_dsRBD
DND1_DSRM
eIF4G1-like_eIF4E-bd
Motif
Other DBs
NCBI-GeneID:
5508105
NCBI-ProteinID:
XP_001628701
UniProt:
A7SHZ6
LinkDB
All DBs
Position
Unknown
AA seq
712 aa
AA seq
DB search
MSQKTPISLMNELAKANNLNPEYNVIEETGPAHKKTFKVQLKLGDIGIWEGMANNIKLAK
HKAAEKGLENCGLCMPEKKVVISRPVNLTPTVELNGLAMKLGKTTQYRELPPKPLLNAHT
GPYTSPMGYHNGYGQIGYSMPTQHHQFNNHYNNHFNMYPRGPPRITRVSLTVGEQEFIGE
GRDKQKARHDAAQKAMKVLREELLTQMSQCGIEVSGDTNETVSNGVDAGDEEDESDKSEI
SQVYEIATRMKMMVDFQDMENAGPAHMKKFKIKATVGPYMTEGEGNRKKDAKKEAAVRML
AELKKLPEPPVDPEKKKKYQRHGLYNAKKVKPKSDIDPTLNSISILGQILQRRHDPAPVY
SLVEERGHMMKKEFTLRVKVGSHEALGVGPNKKTAKKNAAEAMLQLMGFRLTEGEKASHQ
VLKAEAVDKVDATACNSPPTILGRQLKPGLLPMVPEIAKQLGYGNGVIAPIAQEKEPISA
LPPPVPPPEGALNRAPGAPITTDPPNPDRAIPGVTTPGPDKVIGNSFESLMSLAEKHGLV
VKFTDYPKDNKGTPEFLSVCNVSCVPPITCYGSGKTIEESREEASANALNPLLEHRTEKV
ALSKPMSNGKEDLNTETTADVNKKSCADGSDSIIGTTDPNSPKPASDIKLEGVTRDLKDK
HGNCKKSKSQDGNENTNIELGGVTTDLRNKDINCLESKSQDENENIDMTTGK
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagaaaacgccaattagtctgatgaacgagcttgccaaagcgaacaacctaaac
cctgaatacaatgtaatcgaagaaactgggccggcgcacaagaaaacattcaaagtgcag
ctgaaacttggagacattggaatatgggaaggaatggcgaataatatcaagctggcaaaa
cacaaagcagccgagaagggtcttgaaaactgtggactctgtatgcctgagaaaaaggtg
gttatttcacgccctgtaaacttgacaccgaccgtggaacttaacgggcttgccatgaaa
ctcggaaaaacaacgcaatacagagaactaccccctaaacctcttttgaatgcccatacc
ggcccgtacactagtcctatgggatatcataatggttatggtcaaatagggtattccatg
cccacacagcatcatcagtttaataatcattacaacaaccattttaatatgtaccctaga
ggaccacctaggattacaagggtctctttaactgttggggaacaggagtttatcggagag
ggtagagacaagcagaaagctagacacgacgcagcacagaaagcaatgaaggttttgagg
gaggaattacttacgcagatgtcacagtgtggcattgaggtgtcaggagacacgaatgag
actgtatcaaatggtgttgatgctggcgatgaagaagacgagtccgataagtctgaaatt
agccaggtttacgagatagccacacgcatgaaaatgatggttgacttccaagatatggaa
aatgccggcccagcacacatgaagaaattcaaaatcaaagctactgtggggccatacatg
actgaaggtgaaggtaataggaagaaagatgccaagaaagaggctgcagtcaggatgtta
gctgaattaaaaaagcttccagagccccctgttgatccagagaaaaaaaagaagtaccag
cggcatgggttatacaatgccaagaaagttaagcccaagagtgatattgatcctacactg
aactctataagcatccttggtcaaatactgcagcgtcgccatgaccctgcccctgtgtac
agcttggttgaggagcgaggccacatgatgaagaaggagttcaccctgagggtgaaggta
gggagccatgaggcgcttggtgttggtcccaataagaagactgccaagaagaatgcagct
gaggccatgttgcagcttatggggtttagacttactgagggcgagaaggcgagccatcag
gtactcaaggctgaggctgtggacaaagttgatgccactgcatgtaacagcccaccaaca
atccttggaagacagctcaaacctggtcttctacctatggtaccagagatagccaaacag
ctgggctatggtaatggtgtcattgcacccatcgcccaagaaaaagagcctatatcagca
ctaccaccccctgtcccccctcctgaaggggcgctgaatagggctccaggtgcgccgatc
actacagaccctccaaaccctgaccgtgctattccaggggtcaccacgcctggacctgat
aaggtgattgggaatagctttgagagcttgatgagtttggctgagaagcatggcctagtg
gtcaagttcacagattacccaaaggataataaaggaactccagagttcctctctgtgtgc
aatgtctcgtgcgtgcctccaatcacatgctatgggtcaggaaagaccatagaagaatcc
agagaagaggcttctgccaatgcactcaatcccttgcttgaacacaggacagaaaaggtt
gctttaagtaaacccatgagcaatggtaaagaagacctgaacacggaaactactgctgat
gtaaataaaaaatcatgtgcagatggcagcgacagcataattggtaccactgacccaaac
tctcccaagccagcatcagatataaaacttgaaggggtgactagggacttaaaggacaaa
catggtaactgtaagaaaagtaaatcacaagatggaaatgaaaacactaacatagaactt
ggaggtgttactactgacttacggaacaaagatatcaactgtttggaaagtaaatcacaa
gatgaaaatgaaaacattgatatgactactggcaaataa
DBGET
integrated database retrieval system
