Nematostella vectensis (starlet sea anemone): 5509188
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Entry
5509188 CDS
T01037
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
nve
Nematostella vectensis (starlet sea anemone)
Pathway
nve03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
5509188
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nve03019
]
5509188
Messenger RNA biogenesis [BR:
nve03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
5509188
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_16
TPR_14
TPR_11
TPR_CcmH_CycH
TPR_17
TPR_12
TPR_8
ANAPC3
ARM_TT21_C
ARM_TT21_5th
ARM_TT21_2nd
TPR_4
Fis1_TPR_C
Motif
Other DBs
NCBI-GeneID:
5509188
NCBI-ProteinID:
XP_032233927
LinkDB
All DBs
Position
Unknown
AA seq
1563 aa
AA seq
DB search
MASKEVKTLLKKARDSIRNKEYKDALKHCKAALKLEKNNYNALVFVGVCATELGQLEQAQ
AAYKKASDEDPSQVLAWQGLASLYEKNQEFRQDLAGVYVQLLQLYERGDKLKWKEISLKL
CDLYNQQGHFLKGADILEELIKSSEDEAEQYTWWSQIAEMLTEELQATDLTEIKLKLDRA
YQHLTQEEWPYRTQEDLAKHYISYIQFLLKIQIDSNSEVCEETRQRVLYQCQAMAKACPG
SAFPLETLGKLWLEDDDAGDAPSVFERLCELEPSSGVGLIGMGCQQMKNKDLSGALQNLE
KGLQSSPQCTAGWLYLAQTRLGCHDYSHAEKSSKKGLSCLDSTPGMIRRSQFSFKLSLVM
AEALYKQGLGKAAEAKLVYEQLLKESKSLEVYTGLGEALLVLGETNAANEACSKALEINT
KYHPALALQGKISHHEGFNDDAELRFLEAIELCEDCALYHFLLGKLYWEMNGNLRADKSK
CLAQFLMAARLDPHYSATFLHLGHYYRLAGNDLRRACRCYQKSFDLNPKDDNAGSHLCDL
LSQLGEEDAVMGLLSRVTKAAPPGEGKWSWLRLGLYYLRHNDSNNSVTCFQNTLRADLKD
RHCWECLGEAYLSRGSYTAALKAFTRATELDPTSTYSLYQTAAIKQLLCIFSEAVQEYRE
ILGPKPDYVPALKGLGEACLCLARSALAEDFNSRAVDHVGEGLHALAKAVEVSPGMSCLW
KLIGDCCTVLHPVASSSVSLPLPEVLQKCLGNDSVAVAGKKELLSIGTSAYGRALKCLPD
CASLWNDLGFSYFLQAKVADEGRDRLAQRAVQVLKKGVSLEPTNHKLWNTLGVVCGSSLV
DNPDLSQHAFIMSIKTEPNNVSAWTNLGVLYLKHGKVEPAHDAFKYAQALDPSYTAAWVG
QATIAEIIGSDEAADLFRHTTELSSHTESSVGYCHWICTDLLSGDRIKANKPTPSLSHLP
TGYRRAVLNASVAMTKYTDRIRGIAGAYNMHGLLLEHQCLYRQAQRAFHSAVKLLEGDSA
EQDLLNTVHINHARALSALGRHDEAVAEYLQVKPLTDFYDVCGLALAYYLSGNIAESYRT
YEEALQLASTDYEKACVLTALGMLGYKLKELATAKSLLFKSSQLSQPCERGLMALCALGL
VTGDSALAGAALGELMKLGGEGNKDLHYEICCLFSRFYTLQGDPRLGLRHIVKAVHRHPD
RAELWDQLAAFIVQVCPDDLQAASRCAEGTVKLDPVTDGTNRTLYPASILGSGTLPTTGD
PPLDASNLTSRSTYALRASQKALRMYPGHVTNWAVFVSAVTANGIAVESVTREKGLHRLA
LKLSRYVSAKASQEKEDLLQSLGTRRSGSHASLADAVYKWTLLHTGYCLLNCGLTQEALQ
HCEQVLAAYSDVPQLSTDVHFLKAQVLLQMGDSLETGLNSLQASVLSSPHHSAHAWQLVA
QVQSKLGAPMAAELCYRQCLQAGSGKRSTSWRLVPLIRLALLALQQIQANEANRERWEAL
CTEASTEVLKLDPSCTAARLIQAVAQCILGNTRSARRSLQCVSDTTSAASLVARYWLLQL
PSK
NT seq
4692 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgaaagaagtgaagactttgctcaaaaaagctcgcgactccatacgaaataag
gaatataaagatgccctaaaacactgcaaggcagccctaaagcttgagaagaataattac
aatgccctggtttttgttggtgtttgtgccaccgagcttgggcagctagaacaggctcag
gctgcgtataaaaaagccagtgatgaggatccaagtcaagtcttagcctggcaggggctt
gcatctctttatgaaaaaaatcaagaatttcgacaagatcttgccggtgtatatgtccag
ctactacagctatatgaaagaggtgataagctgaagtggaaagaaatcagtcttaaacta
tgtgatttgtataaccaacaaggtcactttcttaagggtgctgatatactggaggagctt
atcaagtcttctgaggatgaagcagagcagtacacctggtggagccagattgctgagatg
ctaacagaggagcttcaggcaactgatcttacagagataaaactcaagctagacagagcc
tatcagcacctgacccaggaagagtggccatacagaacccaggaagacctcgccaaacac
tatatctcctacatccagtttcttctaaaaattcagattgacagcaactctgaggtttgt
gaggagacgagacagagagtcctctatcagtgccaggcgatggccaaggcatgccctggg
tcagccttcccccttgagacccttgggaagttatggctggaagatgatgatgcaggtgat
gccccaagtgtgtttgaaagactatgtgaacttgaaccaagttcaggtgttggtttgatt
ggtatgggctgccaacagatgaagaataaagacctgagcggtgccctgcaaaacctggaa
aaaggcttgcagtcttccccacaatgcactgctggttggctttaccttgcccagacacgg
cttggttgccacgactacagccatgcagaaaagagctctaaaaaaggattgtcatgtctt
gatagcaccccaggaatgatccggagatcacagtttagtttcaaattaagtttggttatg
gctgaggcattgtacaagcagggactaggaaaagcagcggaagctaagttggtttatgag
cagctactgaaggagtctaaatcattggaagtgtacactggtcttggggaggcgctgctt
gtgctgggagagacaaatgctgccaatgaggcttgttccaaggcccttgagattaacacc
aaataccaccctgctctagctctacagggtaagatcagccaccacgaaggcttcaatgat
gacgccgagctcagatttctggaagcaattgagttgtgcgaggactgcgccctataccat
tttctcctgggcaagctgtactgggaaatgaatggaaatctaagagcagacaaaagcaaa
tgccttgcacagtttttaatggccgctcggcttgatccgcactactcggcgacatttctg
catcttggtcactattaccggctcgctggaaacgacctcaggagagcttgtcgatgctac
cagaaatcattcgatctgaatcctaaagatgacaacgctggcagccatctttgtgactta
ttatctcagcttggtgaagaggatgctgtaatgggcctcttgagccgtgtgaccaaagct
gccccaccgggggagggcaagtggtcgtggttacgcctgggactttattatctgaggcat
aatgatagcaacaactcagttacatgttttcagaatactctgcgagcagatctgaaagac
agacactgttgggaatgtctgggcgaggcttacctcagccgtggtagttacaccgccgct
ctcaaagcattcacacgcgctactgagcttgacccaacgtctacatactccctttaccag
actgccgctattaagcagcttctgtgtatcttttctgaggccgttcaggagtaccgtgag
atcctggggccgaagcccgattacgtgccagctttgaaaggtctgggcgaggcgtgtctt
tgcctcgctaggtcggcgctcgcagaggactttaatagtcgggccgttgaccatgtggga
gaaggtctccatgctctggcaaaggctgttgaggttagtcctggtatgtcgtgcctatgg
aaacttattggagactgctgcacggtgcttcatcctgtcgcctcttcttctgtcagcctt
ccgttaccagaggtcttgcagaaatgccttggcaacgactcggttgctgttgcaggaaaa
aaagagctactgagtatcggaacaagtgcttatggccgcgctttgaagtgtctgcctgat
tgtgcaagcctctggaacgacctcggcttcagttatttcttgcaagcaaaggttgcggac
gagggacgcgaccgtcttgctcaaagagctgtacaggtactcaagaagggagtgtcactt
gaaccaaccaatcacaagctctggaatacactaggggtcgtttgtggctcgtcgctggtg
gataacccggatctgagtcagcacgcatttatcatgtcaatcaagaccgagcctaacaat
gtgtcggcgtggacaaatctcggggttctttatctcaaacatggaaaagtcgagcctgct
cacgatgccttcaagtacgcacaagctcttgacccatcatacactgcggcctgggtcggg
caggcgactatcgcggaaattattggaagcgacgaagccgccgatttgtttcgccacact
acagagctatcttcccatacggaaagtagtgtaggctattgccactggatctgcacagac
ctgttgagtggtgatcgtatcaaggccaacaagcctacacccagcctgtcccacctcccc
acgggatacagacgtgctgtgctgaatgcttctgttgccatgacgaagtatacggaccgc
atcaggggtatcgcaggcgcatataacatgcatggacttttgctggagcatcagtgcttg
taccggcaggcgcagcgcgccttccacagcgcggtaaaactccttgaaggtgacagcgct
gagcaagatctgttgaatacggtccacataaaccacgcaagggctctcagtgccctaggc
aggcatgacgaagcagttgctgagtacctccaagtgaaaccactgaccgatttctatgac
gtatgcgggctcgctctagcttactatctatcaggcaacattgccgagagctaccgtaca
tatgaggaagccttacagcttgcgtccacggactatgagaaggcttgcgtactcaccgcg
ctagggatgctgggatataaattgaaagagttggctactgcaaaaagtctcctattcaaa
agctcgcaactctcccagccatgtgaacgcggcctaatggcgctatgtgccctcggtctg
gtaacgggagactcggcgctagcaggggctgcactcggggaactgatgaagctcggagga
gaaggtaataaagacctgcattacgagatctgctgtcttttctcaagattctacactctt
cagggtgaccctcgcctcggtcttcgtcatattgtcaaggctgtccatcggcacccggac
cgtgcggaattatgggatcagctggcggcctttatcgtacaagtctgtcctgacgatctg
caggcggcttcacgctgtgcagagggtacagtaaagctcgatcctgtcactgatgggaca
aaccgcactttatatcctgcgagtatcttgggttcaggcacactacccaccacaggcgac
ccgcccctcgacgcttcaaatctaacatcgcgttcaacgtacgctctgcgtgcttcccag
aaggctctgcgcatgtaccctggacacgtgaccaactgggctgtttttgtgtctgctgta
actgccaatggtattgcagtagagagcgtgactagagagaaaggtttacaccgcctggct
ctgaagctatcaagatatgtcagtgctaaagcttctcaagaaaaagaggatctcctacag
agcctcggtaccaggcgctcagggtcacacgcgtcgcttgctgacgctgtctacaagtgg
accctgcttcacacgggctactgcttgctgaactgcgggctcacacaggaagctttgcag
cactgtgaacaagtccttgctgcatatagcgatgttcctcagctatcaaccgatgttcac
ttcctcaaggctcaagtattactgcagatgggggactcgctggagactgggctaaactca
ctccaggcctccgtgctgtcgagtccacaccactctgcgcatgcgtggcagctcgtcgcg
caagttcagagcaaactgggcgcacccatggcggctgagctgtgctatcgccaatgtctc
caggcaggatctggcaaaagatcaacaagttggcgcctagtcccccttattcgactggct
ctcctcgcgctgcaacaaatccaggctaacgaggctaaccgtgagcgatgggaggcactg
tgtaccgaggcgtcgaccgaggttttgaaactcgacccaagttgcactgcagccagactt
atccaggcagttgcacagtgtattcttggaaacaccaggtcagccaggcgttccttgcag
tgtgttagcgacacgacatctgccgcgtcactagtggcccgatactggctccttcagctt
ccgtctaaataa
DBGET
integrated database retrieval system
