Nematostella vectensis (starlet sea anemone): 5509201
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Entry
5509201 CDS
T01037
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36 isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
nve
Nematostella vectensis (starlet sea anemone)
Pathway
nve03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
5509201
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nve03019
]
5509201
03012 Translation factors [BR:
nve03012
]
5509201
Enzymes [BR:
nve01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
5509201
Messenger RNA biogenesis [BR:
nve03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
5509201
Translation factors [BR:
nve03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
5509201
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
AAA_22
ATPase
nSTAND3
AAA_14
AAA_19
NACHT
Cas3-like_C_2
ABC_tran
Sigma54_activat
AAA_23
Motif
Other DBs
NCBI-GeneID:
5509201
NCBI-ProteinID:
XP_032234011
LinkDB
All DBs
Position
Unknown
AA seq
1110 aa
AA seq
DB search
MHKGGVRYGLGGGSGGRRGNGDGRRGGRGRHPSGLSGKDIGLWYASKSKEKKKKRELDER
AVVTMSKQKEQNIGRLLDDLQQWNPNSDTCNYSSDHPNNMAKVDLKGFSRTIGNNSQRHD
KHHDREFKHHNYDNFDEWQTPRGSQWHDDAVEGPSALAVKDCRGTFSTVKIVNKLYDKSF
GASDSVMDLFDDEIGNEITAGSDSALFNSGDNNFYTNDGAMEGDVLCELDEIIGSLQAGP
AQPSPRQDFSPLGKDVKLDEEFLKDLKLMRDSSTGYNEMQKFREKLPSYQMKKEILGLIS
TNQVVVISGETGCGKTTQVAQFILDDAIQCGNGSLCRIACTQPRRISAISVAERVAIERG
EQCGGGSVGYQIRLESRLPRSRGSIIYCTTGVLQRWLVSDPFLKSTSHVIIDEIHERDLM
SDFLLIIIRDLLPRRPDLKLVLMSATLNAEIFSTYFGKCPMLHIPGFTYPVKEFYIEEII
EMTRYQVTRSSRSSFGNRRGRGGHGPKWQKYTRRKSPYKDRRAQKIGIGDEAEEEEEEVK
WRNYIGSIRNRFHGSTIETMENMDLDQIDFDLAVKLIQHICLNMEAGAILVFMPGWEDIS
KLHENLKRTLPSDKCLLIPLHSLMPTANQRQVFDRPPLGVRKIVIATNIAETSITIDDVV
FVVDCGKVKEKSYDASRKISCLMPVWISTASSRQRRGRAGRVQPGYCFHLFTQLQAQSFI
DYQLPEMLRTPLEELCLQIKILKLGMVREFLSKALQPPEPLAVQNALDVLAQLNALDTKE
NLTPLGYHLASLPVDPRIGKMILFGAILSCLDPVLTVASTLGFREPFVYPLDKKKLADKV
RTRLAGDSHSDHIAVLNAYRGWEAASRHGNASTYCWENFLSTQTLKMLSNMKCQFARLLY
DSGFLKSSDPKEPSANHNADNIKLVKAILCAGLYPNVARIEHHDKLKRPPRLFTQEDGKV
ALHPKSVNVEVTAFQNDWLIYHQKIKSSKVFIHDSTVIAPFPLLFFGGSISMHVEQGHGQ
GHETIAVDNFIKFRSPKRIANLVKDLRRELDTLLERKISQPSLKLSAGQDSCPGSALLTA
IIELITSEESVNWKRRRAVEQMEHERRQRR
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atgcataaaggaggtgttcgttatggcctaggtggaggcagcggtggaaggcgtggtaat
ggtgatggccgccgtgggggacggggcaggcatccatcagggctgagtggaaaagacatt
ggtttgtggtacgcatctaaaagcaaagagaagaagaaaaagagagaattggatgagcgg
gcagttgtcactatgagcaaacaaaaagaacagaatattggcagattgctggatgactta
caacaatggaaccccaattctgacacatgtaactactcatcagaccatccaaataatatg
gctaaggttgatctgaagggattttcaagaactattggaaacaattctcagagacatgac
aaacaccatgatagagaattcaagcatcataattatgataactttgatgagtggcagaca
ccaagaggatcacagtggcatgatgatgctgttgaaggcccaagtgctttagctgttaaa
gactgcagaggcacattttctacagtaaaaattgttaataaactctatgataaaagtttt
ggtgctagtgatagtgtcatggatctgtttgatgatgagattgggaatgaaataactgca
ggttctgactctgctttattcaattctggtgataataacttttatactaatgatggtgca
atggaaggggatgttttgtgtgagcttgatgagattatcggaagcttgcaagcagggcca
gcccaaccctcaccgcgccaagacttttctcctcttgggaaggatgtcaagcttgatgag
gaatttctgaaagacctgaaattgatgagggattccagcactgggtacaacgaaatgcag
aaattcagagaaaaattaccatcatatcaaatgaaaaaggaaattctaggtctgatttcc
acgaatcaagtggtagtaatcagtggcgaaacaggatgtggaaaaacaactcaggttgcc
caatttattcttgatgatgccattcagtgtgggaatggttccctttgcagaattgcttgc
acacagccgaggagaataagtgctatatctgttgcagaacgtgtggctattgagagaggt
gagcagtgtggtggtgggagtgttggataccagattcgactggaaagcaggcttccacgg
agcagagggtccatcatctactgcacaactggcgtattgcagagatggctggtgtcagac
ccatttttgaagagcacaagccatgttataattgatgagatccatgaacgagacctgatg
tcagattttctactgatcatcatcagagacttgctgcctagacggcctgaccttaaattg
gttttgatgagtgcaacgttgaatgcagagattttctctacctattttggtaaatgccca
atgctgcacattcctggatttacatatcctgtcaaagagttctatattgaagaaatcatt
gaaatgacaagataccaggttactcgatccagtcgtagtagctttgggaacagaagaggg
agaggagggcatggccccaagtggcaaaagtacactagaaggaaaagcccatacaaggac
cgaagagcccagaagataggaataggtgatgaggcagaggaagaggaagaggaggtcaaa
tggaggaattacattggctcaataagaaataggtttcatggatcaaccattgaaacaatg
gagaacatggacctggaccagatagactttgaccttgcagtcaagcttatccagcacatc
tgcctgaacatggaggcaggtgctattctagtgttcatgcctggctgggaagacatcagc
aaactgcatgagaacttgaagaggactttaccatcagataaatgccttctaattccactg
cattctctaatgccgacagccaaccagcgacaggtttttgatcgccctccacttggggtg
agaaagattgtgattgctacaaacatcgcagagaccagcattaccattgatgatgttgtc
tttgttgttgactgtggcaaggtgaaagaaaagtcatatgatgcaagtcgtaagatctcc
tgtctgatgcctgtgtggatcagcacagcatcatcacggcagaggcgaggaagggctggc
agggtacagcctggctactgtttccatctcttcactcagctgcaggcgcagtcttttatt
gactaccagctgccagagatgctacgcacccctcttgaagagctctgtctacagataaag
attttgaagcttggaatggtcagggaatttttgtctaaagccttacagccccccgagcca
cttgctgtgcaaaacgccttagatgtccttgcacaacttaatgctctagacaccaaagag
aacctgacacctctgggttatcacttggcctcacttcctgtcgacccccgcattggcaag
atgatcctgtttggcgccattttatcctgcctggaccccgtgttgactgttgcctctaca
cttggtttcagggagcctttcgtctatcccctggataagaagaaacttgctgacaaagtt
aggacacggcttgctggcgactcgcatagcgaccacattgctgtgctcaacgcctacagg
ggctgggaagccgcaagccgccacgggaacgcatctacctactgctgggagaacttttta
tccacacagacgttaaagatgctaagcaacatgaagtgtcagtttgctcgcctgttatat
gacagcggattcctgaagtcttccgatcctaaggaaccatctgccaatcacaacgcagac
aatataaagcttgtgaaggccatcctttgtgcagggttgtaccctaacgtggccagaata
gagcaccacgacaaactcaaacgaccgcctcgcctttttacccaggaagatggcaaagtc
gcgcttcacccgaaatcagtcaacgtggaagtaacagcattccaaaatgactggttgatc
taccaccaaaaaatcaagtcatcaaaggtgtttattcacgactccaccgtgatcgctccg
ttccctcttctgttctttggaggcagcatctcgatgcacgttgagcaaggtcacggtcaa
ggtcacgagaccatcgccgtcgataactttatcaagttcaggtcacccaagaggatagcg
aacctagtcaaggatctgcgccgggaactggataccctgctcgagcggaagatatcccag
ccttcactcaaattgtccgccgggcaggacagctgtccggggtccgcacttcttacagcc
atcatcgagctcataacaagcgaggaaagcgtcaactggaaaagaagaagagcggtggag
caaatggagcacgaaagaagacaaagaagataa
DBGET
integrated database retrieval system
