Nematostella vectensis (starlet sea anemone): 5509474
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Entry
5509474 CDS
T01037
Name
(RefSeq) regulator of nonsense transcripts 3B
KO
K14328
regulator of nonsense transcripts 3
Organism
nve
Nematostella vectensis (starlet sea anemone)
Pathway
nve03013
Nucleocytoplasmic transport
nve03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
5509474
03015 mRNA surveillance pathway
5509474
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nve03019
]
5509474
Messenger RNA biogenesis [BR:
nve03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
5509474
mRNA cycle factors
P-body specific factors
5509474
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
Motif
Other DBs
NCBI-GeneID:
5509474
NCBI-ProteinID:
XP_032234277
LinkDB
All DBs
Position
Unknown
AA seq
514 aa
AA seq
DB search
MGKTETEKGKSPIKTKRDKAFFQTKVVIRRLPPSLKEEELKEYLGDLPEHDFFYFVDGQM
SFGPVLFSRAYINFKNQEDIIKFRDQFDGSSFFDNKGNEYPAVVEYAPYQGVPRKKNRKD
AKCGTIDEDKDYQSFLQSLEEETEPLPSVESHLEEIEARKEDNSKKSTPLLEFLKMKRSM
RATSRQSQGRGGFDKRKRIEKSEESSKGVKKGGSGNKDSKTPPREEKNKEVKRSEGSREQ
RKDEDKKLTKDSKNTQPVKDKYQKNTRERDAKGRPESARSGGRGDDRRSGGRRERRENAN
SDSRGPRDNKNRRDEEPRRDSRPNSRKERGPYRGADNATKSRDETDNKNETKADTESATG
SAPRTTRKEPDAKEERREVIRDRGDGRQSRVRNKDRPDREIYQPGRARTRPTETNERDVK
PSGEKRDDGESKRDRDRDKNRDKNRDRNREREKNRERDRRDRDRDRAKERERNRDKDRYR
GKPRDVTSGDAKPKPEETGKAKAEGTGATREEEA
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaacggagacagagaaaggaaaatcgcccatcaaaacaaaaagagacaaagca
ttttttcagaccaaggtggtgatacgaagactgcctccttcacttaaagaagaagagctg
aaagagtatctcggagatttgcctgagcatgatttcttttactttgtggatggacaaatg
agttttgggcctgtacttttttctcgtgcttacatcaatttcaagaaccaagaggacatt
atcaagttcagagaccagtttgatggatcatctttttttgataacaaaggtaatgagtac
ccagctgttgtcgagtatgcaccataccagggagtacccaggaagaagaacaggaaagac
gccaagtgtggtaccatagatgaagataaggactaccagtcgttcttgcagtccttggag
gaggaaactgagcccctaccaagtgtagagtcacacttagaagagattgaggctcgcaag
gaagataattccaaaaagagcacgcccctccttgagttcctaaaaatgaagagaagcatg
agggcaacatcacgacagagtcaggggcgtggaggatttgacaaaagaaagagaatagaa
aaatcagaagaatcttctaagggggtaaagaaaggaggatcaggcaataaggactcaaag
accccacccagagaggagaaaaataaagaagtgaaaaggtctgagggcagtcgggaacag
aggaaagatgaggacaagaaactgaccaaggactcaaagaatacccaaccagtaaaagac
aaataccagaaaaatacacgagagagggacgccaagggtcgcccggaatccgctcggtct
ggaggcagaggagacgatagacgctcgggaggtcgtcgtgaacgtcgggagaatgcgaac
agcgacagtcgtggtcctcgcgacaacaaaaatcggcgagacgaggagccaagaagagac
agtcgaccgaacagtcgtaaggagcgaggaccctatcgcggcgccgacaatgctacgaaa
agccgagacgagaccgataacaaaaacgaaaccaaagccgacaccgaatctgccacaggt
tctgcgccgaggacgacccgaaaagaacccgacgccaaggaagaacggcgcgaggtcatt
cgggatagaggagacggaagacagtcccgagtcagaaataaggatcgcccagacagggaa
atttatcagccaggacgtgcacggactcgacccacggagacaaacgaaagagatgttaaa
ccgagtggcgaaaagagagacgacggagaatcaaaacgggaccgtgatagagacaagaat
cgtgacaaaaatcgtgacagaaaccgagagcgtgaaaagaatcgcgagcgtgacagacgg
gatcgtgacagggaccgtgcaaaagagcgtgagagaaaccgtgacaaggatcggtatcgt
ggtaaaccacgtgacgtgacgtcaggcgacgcgaagccaaagccagaagagactggtaaa
gctaaagccgagggtacaggtgctacacgggaagaagaggcttag
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