Nematostella vectensis (starlet sea anemone): 5509622
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Entry
5509622 CDS
T01037
Name
(RefSeq) trinucleotide repeat-containing gene 6A protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
nve
Nematostella vectensis (starlet sea anemone)
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nve03019
]
5509622
03036 Chromosome and associated proteins [BR:
nve03036
]
5509622
Messenger RNA biogenesis [BR:
nve03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
5509622
Chromosome and associated proteins [BR:
nve03036
]
Eukaryotic type
Gene silencing
piRNA pathway
5509622
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DnaJ
UBA_7
UBA
RRM_1
UBA_NBR1_C
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
5509622
NCBI-ProteinID:
XP_032234471
LinkDB
All DBs
Position
Unknown
AA seq
1697 aa
AA seq
DB search
MPKDDKKEFLKSLGVDTLSSENDIKRAYKKIALQCHPDKNPSDTSARKQFEEVSKAFEYL
VHDGINDSLKDYDKVFFDFLRDILFGSDGASDFFTYFCGSKQHSCISTDTDPDFRYQDDD
EEEDIDGEQELESLLEIVKNRRKRGKPVPDEFHEEKLQELKTRLSQHKEDMKKDGSKKQA
VKKGKAVSVPVAKPKPKSKKQLLAEQRRRAKEMEQIAMELEEKRKEEEEKEKQRKQLEVE
KQKRLEEERIRSQNEERKRREREQKEREKQQKLDMEKEERRRRQQEEEKKRREEEEKRKK
VEKEKQEREKAAKKAALQAAKEKEEQAKAASKNQNIKRQQQQQRTDQQQYPREIPPRFQK
MKRQQQQQQLQTPNLPPPAPTGSPAQLNKFQSKPQQQPVGKKKDPNRFASKEYADLVDEV
DDAGWNKGSQCKGSGWEGTSEDWEENIAEKWGADRQWGSKEGSSDQLVVDRTDGDSWPTV
GNKSAIGDKPNSSLENSNSKNSSETVPVGTIGSKPPSSNWNSNRNSGGLPLSENWDTTCD
ESIDRALDATESKGSVGPGGVNWVGMGTGGLGGIIGTPLGWEPSKENRDIDKTASKSGWC
GEQNSTVDSWNKTPGKGPKTQVFGGSAPTWGGTPADSSSAWVETSGTETNKPNSSGWNSK
VSSGLSQGNSSSMASVDSTDNKPTDNKPAPSGWGEAGPSWAVQASVTGTACWDTATTTSP
KKPLDSKDSKLSHDKVSGWLETSVTSTSVTADWNGDSNADQEDYYEEAWDGWTTASSKRN
KAPKPAPTNDSNAWMSRSLKQLLDMGFKQEDAEKALRANHMNIESAISDLLSLTASQIEE
ASRASSANTGEPDPAEACRMQQQNTTTSKPNRKQRRKTQQQLQQQQASQAKQESKQTDIY
DANSQSGSSDSTVKDPKSESNKDKEGQAAEGQSNKPSNQGASDGKGNASKTTENSPHLSP
GKSNAGQKRATTGLIQTPALGTPTPMRTPMTHPLLHQQFLHQVQLHQLRMAQGGLLQPPI
NPQQVALLQQMAQLQMVQHRIAQQQLTQKHNIQAQQQLYQQQQQIALMMGQLQQQVMQQH
NHQIAGSRFPSPGFQQSTLPPQSSSAQPGTPPQNAKNSTKATSTEPSQSKPEEPPKVSTA
DKPVTTVASGERITQQSPAPQSRLTQWKQPLLPDPETSHGETWGMPKIEQMSLLSGPVVS
SSLEQQHGAPNLSPQANRIADPVSSRWGVDASLKLSADPPEFKPGVPWRPRGEGEEKSGS
SGSSMESSPQGMPASGKTQITDNPNKQPGFPGGFSSASQFPYSIASSPWQNTEPTDSLNK
TQANPSSIRPPPGLNTSTSSGLPDTPSVEERPAWMKNLMDGGTQQSFAQGPNPGNFQLGR
LGFSASGNSWSTQDGMSVSGLTPNSQPWAAPGGPSSSSTPSSDPSAEAASSTANAVTSAE
QPKPQDEGINSWSTNQPIPSAEEKQQQPPVAPGPRMGSGRGGANPMSTWLVLRNLSPRAD
PTAMRAVCQQYGPLLTFTLNLRHGNSLIRYSNKDQAASARNNLNGMMVKGMQLIADFATD
SDIGGFFEQTPDWSNNPMPPNPSFGNPWSFGTVDPNRPLGSTQGLEKTPQGPPPQMPAMV
PPGMQWGSSSQLPAQLWGNSHPGAATGFPSQVPSMWSFSGGAPRDVEPQSGTNENGLVSP
SMTTFLPPGLLNGGESV
NT seq
5094 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaggatgataaaaaggagttcttaaagtcactaggagtggacactttatcgtca
gaaaatgatataaaaagagcgtacaagaaaattgctctacaatgccatccagataagaat
cctagcgatacttcggcgcgaaaacagttcgaagaagtcagtaaagcattcgaatactta
gtccatgatggaatcaatgatagtttgaaagactatgacaaggttttcttcgactttctt
agagacatcttattcggttcagatggagcaagtgatttctttacttatttctgtggctca
aagcaacattcttgtatatccacggatacagacccagatttcagatatcaagatgacgat
gaagaggaagatattgatggagagcaggagcttgagagtttactggaaattgttaagaac
cgaagaaaaagagggaagcctgttcctgatgagttccatgaagaaaaactgcaggaactt
aaaactaggctttcacagcataaagaggatatgaaaaaggatgggtcgaaaaagcaggct
gtgaagaaaggaaaagctgtatctgtaccagtagctaagcctaaacctaagagcaaaaaa
caactattggctgaacagcgaagaagggctaaggaaatggagcagattgctatggaactt
gaagagaaaagaaaagaagaagaggaaaaagagaagcaaagaaaacagctggaggttgaa
aaacagaagagattggaagaggaaagaatcagatcacagaatgaggaacgtaaacgaagg
gaaagagagcaaaaggagcgagaaaaacaacaaaagctggatatggaaaaagaggagcgt
cgtcggagacagcaggaagaagaaaagaaacggcgggaagaggaggagaagcgcaagaaa
gtggaaaaagaaaaacaggagcgagagaaggcggcaaagaaggctgctttgcaagctgct
aaagaaaaagaggagcaagcaaaagcggcttctaaaaaccagaatatcaagagacagcag
cagcaacagaggacagatcaacaacagtaccctcgtgaaatccctcctcgctttcaaaag
atgaagagacagcaacaacaacagcaacttcagacacccaacctcccccctcctgcacct
acaggctctcctgcacagctaaacaaattccagtcaaaacctcaacagcaaccagttggg
aagaaaaaagacccgaatcgatttgcatccaaggaatatgctgatctagttgatgaagtt
gacgatgctggatggaataagggttcccaatgcaaagggagtggatgggagggtacatct
gaagactgggaggaaaatatcgctgagaaatggggagctgacagacagtggggcagcaaa
gaaggcagctccgaccaacttgttgtggacaggactgacggggactcttggccgactgtc
ggcaacaagagcgccattggcgataaacctaactcttcgttggaaaatagcaattctaag
aactcttctgaaactgtacctgttgggactataggtagcaaacctccatcttctaactgg
aatagtaaccgcaattcaggaggattacctttgtctgaaaactgggacactacttgtgat
gagtcaattgaccgtgcattagatgccactgagtctaaaggaagtgttggaccaggggga
gttaactgggttggaatggggacgggagggctaggtgggattattggtacaccgctaggc
tgggaaccgtccaaagagaatcgtgacatagacaaaacagcttctaaatcgggatggtgt
ggtgagcaaaactccactgttgactcttggaataaaacacccggaaaaggacctaaaaca
caagtatttggaggttctgcccccacctggggcggcactcccgcggactctagctctgcg
tgggtagagacatctggtactgagactaataaacctaactcttccggttggaattctaaa
gtcagttcaggcttatctcaagggaactcttccagtatggcttctgttgactctactgat
aacaaacctaccgataacaaacctgccccttccgggtggggtgaggcagggcctagttgg
gctgtgcaagcgagtgttactggtactgcatgttgggatactgcgaccactacgtctccg
aagaaaccattagattctaaagactctaagcttagtcatgataaggtttcgggatggcta
gagacatctgtcacgtcaacgtccgttactgcagactggaatggggatagtaatgcggac
caggaggattattatgaggaggcttgggacggatggacaacagcctcgtctaagcgcaat
aaggcacctaagcccgcccccactaacgacagtaatgcctggatgagcaggtcactaaag
caactgctggacatgggatttaagcaagaggatgctgagaaggcgctgcgtgctaatcac
atgaatatagagagtgcaataagtgacttgttgtctctgactgctagtcaaatcgaggaa
gcaagtcgggcatcatcagcaaacacaggtgaaccagatcctgccgaagcatgccgcatg
caacaacagaacactactactagcaaaccaaaccgcaaacagcgacgcaagacacagcaa
caactccaacagcaacaagcaagccaggcaaaacaggaaagcaaacaaacagatatttat
gatgctaatagtcagtctggatctagtgattctaccgtcaaggaccctaaaagcgaatca
aataaagacaaggaaggccaggcagctgaaggacaatcaaataagccatctaaccaagga
gcatctgatggtaaagggaacgcttctaagactactgagaattccccacatctctctcct
ggaaaatctaatgcaggccagaaaagagccaccactggattaatacagaccccggcactg
ggcacgccaactcctatgcgtacacccatgacacatcctcttctgcaccaacagtttctg
catcaggttcagttgcatcagttgcggatggctcaaggggggctcctccagccaccgatc
aacccacagcaggtggccttgttgcagcagatggcacagctccagatggtccagcaccgg
atagcgcaacagcaactgacgcagaagcacaatatacaagcccagcagcaactttaccag
caacagcagcagatcgccttgatgatgggccaactgcagcagcaggtcatgcaacagcat
aaccaccagattgctggcagccgcttcccctctccaggcttccagcagtctactctaccg
ccacagtcttcgtcagctcagccaggaacgccacctcagaacgcaaagaactcaacaaaa
gcaacatcgacagaaccctctcagagtaagccagaggagccccctaaagtgtccactgca
gacaagcctgttacgactgttgcatcaggcgaacgtattacgcaacagtcgcctgcacca
cagtcacgccttactcagtggaagcagccactcttgccagacccagagacatcgcatgga
gagacatggggaatgccaaagattgagcaaatgagtcttttatctgggccagttgtgtca
tcctcccttgaacagcaacacggtgcacccaatttgtcgccgcaggcaaacaggattgca
gaccctgtgtcaagcagatggggggtcgatgcgtccttgaagctctctgctgatcctcct
gagttcaagccaggcgtcccatggcgtccgcgtggagaaggagaggaaaagagtgggagt
agcggatcgagcatggaatcctcaccccaaggaatgcctgcttctgggaaaactcaaata
acagataatccaaacaagcaaccaggtttcccaggggggttctcctcagcgtctcaattc
ccttacagcattgcatcttccccttggcaaaacactgagccaacggactccttaaacaaa
acccaagcaaacccttcgtctattcgccctccccctggactgaacacctctacgtcaagt
ggtcttcccgacactccgagcgtcgaggagcggccagcgtggatgaagaacttgatggac
ggtggtacacagcagtcttttgctcagggccctaatccagggaactttcagttaggaaga
ttgggcttctccgcatctggaaactcatggagtacacaagatgggatgtctgttagtggg
ttgacgcccaactctcaaccatgggccgcgccaggtggtccatcatcctcgtctacacca
tcatccgacccaagtgctgaggcagcttctagtactgctaatgctgtaacctcggcggag
caacccaagccgcaagatgagggaatcaactcatggtccactaaccagcccattccatcc
gctgaggagaagcagcaacaaccacctgtagccccagggcccaggatggggtcaggaagg
ggtggggctaaccccatgtctacctggcttgtactaaggaacttgtcaccaagggctgat
cctaccgctatgcgtgctgtatgccagcagtatggccccctactgaccttcaccctcaac
ttaagacacggcaacagcctgatacgctacagcaacaaggaccaggcggcaagcgcgcgc
aacaaccttaacggcatgatggtcaagggcatgcaactcatcgcagacttcgccacagac
agcgacattgggggcttcttcgagcagactcctgactggagtaacaaccccatgccaccc
aacccatccttcgggaacccctggtctttcggcactgtcgacccaaatcgcccacttgga
tcaacccaggggcttgagaagacaccccagggcccaccccctcaaatgccagctatggtc
cctcctggaatgcagtggggctcctctagccagcttccggcacagctgtgggggaactcc
catcctggggctgctacaggtttcccttcgcaggtgcctagcatgtggtcgttctcgggt
ggggctcctcgcgatgttgagccgcagtcggggacaaacgagaatggacttgttagccct
tccatgaccacttttctgcctcctggtttattgaacggcggagagtctgtgtga
DBGET
integrated database retrieval system
