Nematostella vectensis (starlet sea anemone): 5509806
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Entry
5509806 CDS
T01037
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1 isoform X2
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
nve
Nematostella vectensis (starlet sea anemone)
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nve04040
]
5509806
Ion channels [BR:
nve04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
5509806
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Ion_trans
ANK_LRRK2
NPV_P10
Motif
Other DBs
NCBI-GeneID:
5509806
NCBI-ProteinID:
XP_001630318
UniProt:
A7SDG0
LinkDB
All DBs
Position
Unknown
AA seq
1124 aa
AA seq
DB search
MSTSSMELLEVPNGTAVRHGDEDVAKDHGIAEENQAFIMEIQSKQVQERMRKLSSIVMAY
ENEIPSAKPDEDNSKTTYGEHEVDKAQRLNDAVLNGDYVLANKLVQDKQYLNNPDRYGRS
PLQNAVVKSDIRMVKLLLDARPDITHKDDRGDTIMQCAARTGNEAILKMLLHNAECDVNE
PGSSGLTALHIAAMLNKPSLCRILLERNAKFDSKDEDFKTPLGKAMENGAAAAANYLIEY
LKTRKISLETFLYNADKDGSTLLHLAVDSGFTKVVQLCLDNGARIRQPKRGDRMTAFHLA
CEQGSTDIVQLLIQHDPGVAKILLIDSRSFAPLHMAAQSNNLEIVKMLVGKQASVNTRNQ
DNRTPLMLAAMCGAAETVEYLMNSDADTTVIDVDGKTALSTAVGHPTTMEVLLKDPTLVP
FLTEKDSSGYAPPHYAALKGDIKSIRLFLSHNKSSATVLSDTQDTPLHVAARYGYHDIVR
ALLEKQGSKIINLKNSQSRTALHYACGGGFHKVTAVLLDYGATIEKDQANRTPLHEAARK
GSRKNVELIVKRHKQCLNTMDEDKNTALHVATIHGHAPLVSYLLSISRQEILMNSSNQNI
LDQAVAEDETEVALAIASHLRWREILMSCNAGVFNMMTKLVEKMPSVAERILDQCIEYEG
EETNKDFKIKYDLSVLLCKGNPKNPNQKSSLEILKTIAFHRRERCLTHPVSFTVLSTKWN
GFGWVAFMVNILVTMLYLVPLSYLHVQLEDNDQRYCPDRLNGTDAQGKPIKLQNVKTCIK
NNQNMQILQYFIIVLVSLLLLKELHQLVTKWRIYFTSATNMIEVTAFVCALVSVAPTCEC
KWGTQRVAATIALFFGWISLILYIQRLPSYGKYVIMLYRMFVTLIKVLLLFILFAFAFGI
TFHLILDVEPFTSLGNAMMLMFIMMLGEINYVDTFMPWTKLGHPYLANILIVLFCLTMPI
ILMNMLVGLSVGDIDKIEQSALIDRYVMQVELLSLIEESLPWWLLKRVQRFTHSEYPNRP
HSTIKGVFNAVLGFGEAEGEQENNDDNPSPMMMALQEKLDEQATEIEDIHTIIKTIHQMM
KEREEKEDKETKSSDKKPNIRIGKPFGGLSSFGSKTDDKSESQS
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgtcatctatggaactactggaagtacctaacggtacggctgtgaggcatggg
gacgaggatgtcgcaaaggatcacggaattgctgaggaaaaccaggcgttcattatggaa
atccagtctaaacaggttcaagagcgcatgcgcaaattgtccagcattgttatggcatac
gaaaacgagataccatcggcaaaacccgacgaagacaacagtaaaactacatacggggaa
catgaagttgacaaagcccagaggctcaatgatgctgttctgaatggcgactacgtactt
gccaataagcttgttcaagacaagcaatacctgaataacccggacaggtatggccggtca
cctcttcagaacgcagtcgtcaagagcgacattaggatggtaaagttgctgttggatgcc
agacctgacataacgcataaagatgaccggggtgataccatcatgcagtgcgcggcgcga
actggaaatgaggccatactcaagatgctgcttcacaatgccgagtgcgatgtgaatgag
ccaggaagcagtggacttacagcgttacacatcgccgctatgctaaacaagcccagtctc
tgtagaattttgctcgagcgcaacgccaagtttgacagtaaagacgaggactttaagact
cctcttggtaaagccatggagaacggcgctgcagcggccgctaattatctaatcgagtac
ttgaaaacaagaaaaataagcctcgaaacatttttatacaacgctgacaaggacggcagt
actcttttgcatctagccgtggatagcggtttcactaaggtggttcaactatgcctggac
aacggggcaagaatccgccagcctaagcgcggtgaccgaatgaccgcattccaccttgcg
tgcgagcaagggtcaacagacatcgtacagctgctcatccagcacgacccaggagtggct
aaaatcctcttgattgacagccgaagcttcgcccctctacacatggccgcccagagcaac
aacttggaaatcgtgaaaatgctagtgggaaagcaagcatccgtgaacacgcgtaaccaa
gacaacagaacgccactgatgctagcggccatgtgtggggcggccgagacggtggagtac
ttgatgaatagcgacgcagacacgacagtcatcgatgtagacggcaagactgcgctctct
accgccgtggggcaccctaccaccatggaagtactacttaaggaccctacgctggtccca
tttcttaccgagaaagattcgtccggatatgcaccgccgcactacgccgcacttaaaggc
gatatcaagagtattcgtttgtttttatcacataacaagtcctcggccactgtgctgtcc
gacacacaagacacgcccctccatgtcgccgccagatacggttaccatgacatcgtgcgt
gcgttgcttgagaaacaaggctccaagatcatcaacttgaaaaacagccaatcacgaaca
gctctgcattacgcatgcggtggtggattccacaaggtgaccgctgtcctgctcgattac
ggggccacaatcgaaaaggatcaagcgaataggacgccacttcacgaagctgcacgaaaa
ggctccaggaaaaacgtagagttgatcgtcaaaaggcacaagcagtgtctgaataccatg
gacgaagataagaacacagcattacacgtggctacgatacatggccacgcccctttggtc
tcgtacttgctgtcaatcagccgacaagagatccttatgaactcctccaaccagaacatt
ctagatcaagccgttgccgaggatgagaccgaagtggcgttggcgatagctagccattta
aggtggcgagagatcttgatgtcatgcaatgcgggcgttttcaatatgatgacaaaactg
gttgagaagatgccttcggttgccgagagaattctagatcagtgcatcgagtacgagggc
gaagaaacaaacaaggattttaagataaagtacgaccttagcgttctcctttgcaaagga
aatccaaaaaatccgaaccagaagagttcactagagattctcaagacgatcgccttccat
cggcgcgagagatgtctcacccaccctgtgtctttcaccgtgctcagcaccaagtggaat
ggattcgggtgggtggcgtttatggtaaacatcctagtgacaatgctttatcttgtacca
ctctcctacctacacgtgcagctagaagacaatgaccagcggtattgccctgatcggctc
aacggtactgatgctcaaggaaaacctatcaaactccaaaatgtgaaaacgtgcatcaaa
aataaccagaatatgcaaatcctccagtacttcattatagtgctagtctctttacttctt
ctgaaggaactccatcagctcgttaccaagtggcgaatctacttcacgtctgccacgaat
atgatcgaggtcacagccttcgtttgtgctttggtttccgttgctccgacatgtgaatgc
aagtgggggacccagcgtgtggctgccaccatcgctttgttctttggctggatcagcttg
atcttgtacatacagaggcttccatcatacgggaaatacgtcatcatgttgtacagaatg
ttcgtcacgctgatcaaggttttgttgctattcattctattcgcctttgcgtttggcatc
accttccaccttatactggatgtggagccattcacgtcgcttggtaacgcgatgatgctg
atgttcatcatgatgctcggtgagataaactacgtggacaccttcatgccgtggaccaag
ctaggacacccctacctcgcaaacatcctcatcgtactgttctgtctcacgatgccaatt
atactcatgaacatgctggttggtttgtctgtgggtgatatcgacaaaatcgagcagagc
gcgttgattgacagatacgtcatgcaggttgagttactgagtcttattgaagaatcactt
ccttggtggctgttaaagagagttcagcgcttcacccactccgaatatcccaacaggccc
cactccaccataaaaggggtgttcaatgccgtgttggggtttggagaagctgaaggcgag
caggaaaacaacgatgacaacccctcccctatgatgatggcactgcaggaaaaactagac
gagcaggcaacggaaatcgaggacatacacacaattatcaagaccatccaccagatgatg
aaagaacgggaagaaaaggaagacaaagaaacaaaatcttccgataagaagccgaacatt
cggatcggaaagccattcggagggctgtcgtcattcggctccaagaccgatgataaatcg
gagtcacaatcataa
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integrated database retrieval system
