Nematostella vectensis (starlet sea anemone): 5509902
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Entry
5509902 CDS
T01037
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
nve
Nematostella vectensis (starlet sea anemone)
Pathway
nve03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
5509902
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nve03400
]
5509902
DNA repair and recombination proteins [BR:
nve03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
5509902
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
5509902
NCBI-ProteinID:
XP_032234804
LinkDB
All DBs
Position
Unknown
AA seq
927 aa
AA seq
DB search
MALQPVQQISLDSAAESGFLSFYRSLPEKPETTFRVFDRSDYYTVHGPDALFAAKEVFKT
SSVVKYLGTGDHKVPSVVLSKMNFESTCRDLLLIRQYRIEMYRSKGGKNSSAWELVAKGS
PGNLQQFEDILFGNSEMSASAVVMAIKLGTVTGQRVVGVAYADVASRKLGVCEFADNDQF
SNLEALIVQLGPKECLMASTDSSGDAAKTHEVVKRSNILVTERKKVEFSNKDIVQDLNRL
LKLTAGGNSATLPEMDMIHATAALAAVIKYLELLSDESNFSQFKLSSFDLSQYMKLDAAA
VRALNLLPNPMDGGNKSMCLTGLLNKCKTPQGQRLVAQWIKQPLMDKNKIEERLNIVEAF
VEDTELRQTLQDEMKKFPDFSRLAKKFQRQKATLQDCVRVYQSVQRLEPFADVLERYHGD
HRKLLVECFRDPLMELVADFAKFCDLVETTIDLEQVENHEYLIKATFDEGLQECREHMDE
ILEKFPVELNKAGRDLSLEPSKTIKLESNNQLGYFFRITRKEEKVLRNNKRYSTIETRKD
GVRFTNSALSQLNDEFRGYKDTYNDVQGKLAAEVLKIAGGYSEPMQGLSDVIAQIDALVS
FAHVSANAPIPYVRPTITPKGEGDIILTGSRHPCLEIQDNVAFIANDVTLSRDKQMFLII
TGPNMGGKSTYIRQIGVIVLMAQLGCFVPCSTAQISITDCILARVGSGDSQLKGVSTFMS
EMLETASILRTATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATQIKSFCLFATHFHEL
TSLADEVSTVTNLHVTALTTGGTLTLLYKVKPGVCDQSFGIHVAELAHFPSDVIEFAKQK
AAELEDFQGSSAELGQGVTDSTGESQAKRRRLAKQEGEVIIKDFLQKVNQLQLETMTDEQ
IYEEVQKLKQGVQEKGNPYINGLVLKS
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atggccttgcagcccgtccaacagatttccctggattccgcggcagagtcgggatttctg
tcattctaccgttcgttacccgagaaaccagagactacattccgagtttttgacagatca
gattactatactgttcatgggccagatgctctctttgcggccaaagaagtgttcaaaacc
tcaagcgttgtcaaatatcttggcaccggtgaccacaaagtgccatctgtggtcctaagt
aagatgaactttgagtcgacgtgtcgagacctgctacttattcgtcagtacaggattgaa
atgtaccgcagtaaaggaggcaagaacagtagtgcctgggaactggttgctaagggatct
cctggcaacctgcagcagtttgaagatatcttatttgggaattctgaaatgtctgcttct
gctgttgtcatggcaattaagcttggtacagtcactggacaaagagttgttggagttgcc
tacgcagatgttgcttcaagaaagcttggtgtttgtgaatttgccgataatgatcagttt
tccaatcttgaggctctcattgtccagcttggtcctaaggaatgtcttatggcttccact
gacagcagtggtgacgctgccaagacccatgaagttgtcaagcgcagcaacatccttgtt
acagaacgcaagaaagtggagttttcaaacaaagacattgtgcaagacttgaacaggctt
ctgaaattaactgctgggggaaatagcgcaacattacctgaaatggacatgatacatgca
acagcagccttggccgcagtcatcaaatacttggagctgctgtctgatgaatctaacttc
agtcagttcaaactgtcctcctttgacctgagtcagtacatgaagctggatgctgctgct
gtcagggcgcttaaccttcttcctaaccctatggatggtggaaacaagagtatgtgcctg
acaggccttttaaacaagtgcaagactcctcagggacaaaggcttgtcgcccaatggatc
aaacagcctttgatggacaagaataaaattgaggaaagattgaatatagttgaggcattt
gttgaggacacagagctgagacaaacactccaggatgaaatgaagaaatttccagatttt
tccaggcttgccaagaagttccagcgacaaaaagccactctacaggattgtgtacgcgtc
tatcagtcagttcaacgcctggaaccatttgcagacgtcctcgaacgttaccatggcgac
cacaggaagcttctggttgaatgcttcagggatccgcttatggaacttgtagctgacttt
gcaaagttttgtgacctagtggagaccaccatagacctggagcaggtcgagaatcacgag
tatcttatcaaggccacattcgacgaaggtctgcaagagtgccgggaacacatggacgag
attctggaaaagtttcctgttgaattgaacaaggctggtagagacttatctcttgagcct
tcaaagacgattaaacttgaatctaataaccagcttggctatttcttcagaattactagg
aaggaagaaaaggtacttcgtaacaataaacgctattcgactatcgagacccgtaaagat
ggcgtccgctttactaactcggctcttagtcaactgaacgatgaatttcgcggctataaa
gacacgtacaacgacgtgcagggtaaactggcggcagaggtcctgaaaatcgcaggaggt
tacagtgaaccgatgcagggacttagtgatgtcatagcccaaattgacgctcttgtcagt
tttgcacatgtctctgcaaacgcaccgataccctacgtgaggcctactattacccctaaa
ggtgaaggagacataattctcacaggatctcgtcacccgtgtctcgaaatacaagataat
gtcgcgtttattgcaaacgatgtaaccttatcgagagacaaacagatgtttttgataatc
actggaccgaatatgggcggaaagtcaacctacatacgacagatcggtgttatcgttctg
atggctcagctgggttgttttgtgccgtgtagtactgcccagatctctatcaccgattgc
atcttagccagagtgggatctggggatagtcaactcaagggtgtgtcaaccttcatgtcg
gaaatgctggagactgcttcgattctaaggactgccaccaaggactcactgatcatcatc
gatgagctagggcgaggcacctcaacatatgacggctttggactcgcgtgggccatatct
gagtacatagcaactcaaattaaatcattctgcctgtttgccacgcattttcatgagctc
acatcattggctgacgaggtttctacggtaactaacctgcatgttaccgccttaaccacg
ggcgggactctgaccctgctttacaaagtgaaaccaggtgtttgtgatcaaagctttggt
attcacgtggcagaacttgctcatttcccaagcgatgtcatcgagttcgccaaacaaaaa
gctgcagagcttgaggattttcagggtagctctgctgaacttggtcaaggagtcacagat
tctacaggtgaatcgcaggcaaaacgaagaaggcttgcaaaacaggaaggagaggttatt
atcaaagacttccttcagaaggttaaccagctacaattagagacgatgacagatgagcaa
atctacgaagaagttcagaaactcaagcagggagtgcaagagaaagggaacccttacata
aatggtctggtgctaaaaagttaa
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