KEGG   Nematostella vectensis (starlet sea anemone): 5510104
Entry
5510104           CDS       T01037                                 
Name
(RefSeq) DNA ligase 1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
nve  Nematostella vectensis (starlet sea anemone)
Pathway
nve03030  DNA replication
nve03410  Base excision repair
nve03420  Nucleotide excision repair
nve03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:nve00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    5510104
   03410 Base excision repair
    5510104
   03420 Nucleotide excision repair
    5510104
   03430 Mismatch repair
    5510104
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:nve03032]
    5510104
   03400 DNA repair and recombination proteins [BR:nve03400]
    5510104
Enzymes [BR:nve01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     5510104
    6.5.1.6  DNA ligase (ATP or NAD+)
     5510104
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     5510104
DNA replication proteins [BR:nve03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    5510104
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     5510104
DNA repair and recombination proteins [BR:nve03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     5510104
   NER (nucleotide excision repair)
    Other NER factors
     5510104
   MMR (mismatch excision repair)
    Other MMR factors
     5510104
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C
Other DBs
NCBI-GeneID: 5510104
NCBI-ProteinID: XP_032235100
LinkDB
Position
Unknown
AA seq 959 aa
MAQKSISSFFNVPSKPKNNDKEVERPKQKTPTKAPQVAASLESPPVKKSRRRVARVLDDS
SDDEDEKMETGTVSPPKTNGHSSSPERGKEAAKCDGTSAVTSRHNACDTNSPPCVQTSPS
GIPKRTTARKHMKRKASSESGSSSDDKERETKKPKADVENECSAKQIADADYKLELEENG
KENKKKVKKEKNEKQPKEKTTNEKEIAKNKQNHKKTKKVDNKTTTESSEDNQEKSSSDDE
DMDKKTISKKSAFSSFFSPKPTSRPKKQKEPMKETVKKEKKEEKSLAKSEDSNVEINADI
KPVEARDYNPEKNYYHPIKNACWRRGEKVPYLAVARTFEIIEDTSARLKIMSILSNFFRS
VIALTPNDLLPCVYLCLNKLAPAYEGIELGIGDHILMKAVSEATGRSLSQIKADLADKGD
LGLVAEASRSNQRTMFAPPKLTAASVYSKLKDIALFTGHSSTGKKVDIIKGMFVACRHSE
ARYLIRSLSGKLRIGLAEQSVLTALAHSVVLTPPSSEFPPPVIDAAKTLSSDELKKMLDA
GALTVKTCYCELPNYNKIIPALLEYGLEDLPNKCYLTPGVPLKPMLAHPSKGVAEVLKRF
EGSAFTCEYKYDGERAQIHLLENGEIHIYSRNQENNTSKYPDIISRMPKVMSEEIKSFII
DTEAVAWDREKQQILPFQILSTRKRKDADVSEIKVQVCVYAFDLLYLNGKSYVKEPFSVR
RNLLRTSFKEAEGEFVFAKCMTSTNTEDMAEFLEESIKGNCEGLMVKTLDVDATYEIAKR
SHNWLKLKKDYLADVGDTLDLVPIGGYRGKGKRTGAYGGFLLACYDAESEEFQTICKIGT
GFTDEVLESHHQFFKDHVIDKPKPYYRYDDGLEPDHWFDAVQVWEVRAADLSVSPVHKAA
VGQVDPVKGISLRFPRFLRVRDDKKPEEATDSTQVAEMYRDQDSVKNNAVTTNQEEDFY
NT seq 2880 nt   +upstreamnt  +downstreamnt
atggcccagaaaagtatctcatctttttttaatgtgccatccaaaccaaagaataatgat
aaagaagttgagaggccaaaacaaaaaactccaacaaaagcacctcaagtagctgcttct
ctggagtccccgcctgtcaagaagtctcgtcgccgggtggctagagtcttggatgacagt
agtgatgacgaggacgagaaaatggagacaggaactgtttcccctccaaagactaatgga
cacagtagtagtcctgagagaggcaaggaggctgcaaagtgtgatggtacctctgctgtc
actagcagacacaatgcatgtgatacaaattctcccccctgtgttcagacatcaccttct
gggatcccaaaaagaacaacagcaagaaaacacatgaaaagaaaggcttcaagtgaaagt
gggagttcttctgatgataaggaaagagaaacaaagaagcctaaagctgatgtggaaaat
gagtgctcagcaaaacaaatagctgatgcagattataaattggaactggaagaaaatgga
aaagaaaacaagaagaaagtgaaaaaagaaaaaaatgaaaaacaaccaaaagagaagaca
acaaacgaaaaggaaattgctaagaataaacagaatcacaaaaagacaaaaaaagtcgat
aacaaaacaactacagaaagctctgaggataatcaggaaaagtcttcaagtgatgacgag
gatatggacaaaaaaacaatttcaaagaaatcagcatttagcagcttcttttctcctaag
ccaacttcaagaccaaagaaacaaaaagagccaatgaaggagacagtgaaaaaggaaaag
aaagaagagaagtctttagccaaatctgaagacagtaatgttgagattaatgcggatatc
aagcctgttgaggccagggactataacccagagaagaactattatcaccctatcaagaat
gcatgctggagaagaggggagaaggtgccttatcttgctgttgcaagaacctttgagata
atagaagatacatcagcaaggctaaagataatgtccattctcagcaacttttttagatct
gtgattgcattaacaccgaatgaccttcttccatgtgtctatctttgcttgaataagctt
gccccagcatatgaaggaatagagcttggtattggagatcacatcctcatgaaagccgtc
tctgaagctacagggcgaagtctctcccaaatcaaagctgacttggcagacaaaggggat
cttggtcttgttgctgaggctagtcggagcaaccagcgtactatgtttgcgcctccaaaa
ctcacagcagccagtgtttacagcaagcttaaggacatagcattattcactggacatagt
tctacaggaaaaaaagtagacattattaaaggaatgtttgtggcgtgtcgtcactctgaa
gcaaggtacctcattcggtcacttagtggcaagctcaggataggacttgcagaacagtca
gtcctcactgcactggctcactctgtggtacttacacctcctagttcagaatttcctcca
cctgtgattgatgcggctaagacgttgtctagtgatgaacttaaaaagatgttagatgca
ggcgcacttacagtcaagacatgttactgtgaactaccaaactataacaagatcatacct
gcacttctggagtatggacttgaggatctgcccaataaatgctaccttacgccaggagtg
cctttgaagcccatgttggcacacccctctaagggtgtggccgaagtactcaaaaggttt
gaaggcagtgccttcacatgtgaatacaagtatgatggtgaacgtgctcagatacatctt
ctggaaaatggcgaaatccacatttatagtagaaaccaggaaaacaacacatcaaaatat
ccagatatcatttcaaggatgcccaaggtcatgtcagaggaaatcaagtccttcatcatc
gacactgaagcagtagcttgggaccgagagaagcaacaaattctgccattccagattctt
agcacaaggaaaagaaaggatgcggatgtttccgagatcaaagtgcaagtttgtgtctac
gccttcgatctactctacctcaatgggaagtcttatgtgaaggaacctttcagtgtcagg
aggaaccttctgagaacatctttcaaggaagctgaaggggaattcgtgttcgctaaatgc
atgacttcaacaaacacggaagacatggcagagttcttggaagagtcgattaaaggtaat
tgcgaggggttgatggttaagactttagacgttgatgccacctacgaaatcgctaagagg
tctcataactggcttaagttgaagaaagactatcttgctgacgtcggcgacaccctcgac
ctagtccccatcggaggctatcgaggcaaggggaaaaggactggggcctacggtggcttt
ctgttggcttgttatgatgcggagagtgaagagtttcaaacaatttgcaagatcggaacc
ggcttcacggatgaagttctcgagagccaccatcagttcttcaaggatcacgtgatcgac
aagcccaaaccgtattatcgctatgacgacggactggagcctgatcattggtttgacgcc
gtccaggtgtgggaggtgagggccgctgacctgtccgtctctcccgtccacaaagctgcg
gtcggacaagtggaccccgtcaagggcatctcgctgcggttcccgcgctttctgcgcgtg
cgcgatgacaaaaagcctgaagaggcaacagacagcactcaggttgccgagatgtacaga
gatcaagacagtgtaaagaacaatgcagtaacaacaaatcaggaggaagatttctattaa

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