Nematostella vectensis (starlet sea anemone): 5510189
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Entry
5510189 CDS
T01037
Name
(RefSeq) endoribonuclease ZC3H12A
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
nve
Nematostella vectensis (starlet sea anemone)
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nve03019
]
5510189
Messenger RNA biogenesis [BR:
nve03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
5510189
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
KH_N4BP1_1st
UBA_6
UBA_N4BP1_C
zf-CCCH
zf-CCCH_2
KH_N4BP1_2nd
PRORP
UBA_9
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
5510189
NCBI-ProteinID:
XP_032235178
LinkDB
All DBs
Position
Unknown
AA seq
635 aa
AA seq
DB search
MADTIQDEIAVQNDKKSMVAQTSERIRMLFNVNVTFSHPETSGYQWVQLKGSKDGVLKAK
EYIKSLCNPEIQGTKVEFDERFYDAIHEYSRHVEKNSCAIVMFSAKNEALIQGSAMAVAI
ASSSIEERLNELKAGLQHSFQDRSNNQRTGNVSSSRTYANSQSNIQTGPYIDPSLEEFAM
KLGYTKEDIYQVVRKQGKEVDQNTLLHELIKVSAPGRPRQQENPPQTLPPGPAPLPVPTR
RGDIVARGAPSMSQLADRGVIPDTSIVFPKGANMLAERPPEEEAKIYHDVVGQKESSLDT
ELRHIVIDGSNVAMSHGNQQCFSCQGIKLCVEWFKKRGHKEITVFVPQWRKEAPRIDTPM
EDQDILLELERQRHVVFTPSRRVNGRRIVCYDDRFILRLASEIDGIIVSNDNFRDLFDEN
PKWQEVIEHRILMYSFVGDIFMVPDDPLGRHGPTLNDFLRKGSVSHPRICPYLKRCTYGL
RCKFYHPERDPGRQEKQELRQVTSSISQGRYLRETPQGNGGMLQTQDSQHKARAAPRNGG
PQYTTSPYGQLNMQYSAALSHRQALTMRDNGRDMERHTKSSATRTNYDQTDGMNSELFNE
LITIFPDNEEAILKIMRENPNADKQLLANLVASCV
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atggcggatactatacaagacgaaatagccgtgcaaaatgacaagaagagtatggtcgca
caaacctcagagaggatacgaatgttgttcaatgttaatgtgactttcagccatcccgag
actagtggatatcaatgggtacagctgaaagggtctaaagatggagtactaaaggcaaag
gaatacataaaatcgttgtgcaacccagagattcaagggacaaaagtggaatttgatgag
agattctatgacgctatacacgaatatagtcgacatgtggagaagaattcttgtgcgatt
gtaatgttttcagcgaaaaacgaagctctaattcaaggaagcgccatggccgtcgctatt
gcaagctcatctatagaggaacgactcaacgagctaaaagctggattacaacattcattc
caggaccgttcaaataaccaaagaactggcaacgtatctagcagtagaacttacgccaac
tctcagtctaacatacagactgggccctatattgacccatctttggaggaatttgcaatg
aaacttggttatacaaaggaggacatttaccaggttgtgcgaaaacagggcaaagaagtt
gaccagaacacattacttcacgaactgatcaaagttagtgcaccaggaagaccaagacaa
caggagaatccaccccaaacacttcctccaggtccagcgcctttgccagtacctacaagg
cgtggggacatagttgcacgtggtgcaccttctatgtcgcaactggcagacaggggtgtt
atcccagatacaagcattgtctttcccaagggtgcaaatatgttggctgaaaggcctcca
gaggaggaagccaagatctaccatgatgttgtagggcagaaggaatcttccttggatact
gagctacgtcatatagtcattgatggcagtaatgttgcgatgagtcatggcaaccagcaa
tgcttttcctgccaaggaattaagctctgtgtggagtggtttaaaaaacggggacacaaa
gagatcactgtgtttgtaccacaatggaggaaggaggctcctagaattgatactccaatg
gaggaccaggacatactattagaacttgaaagacaacggcatgttgtgttcacgccatcc
agaagagtaaatggcaggcggatagtctgttacgatgacaggtttattctacgactggca
tcagagattgatgggatcatagtatcgaatgataactttagagacttgtttgatgaaaat
ccaaaatggcaagaggtcattgagcataggattcttatgtactcttttgttggagacata
ttcatggtccctgatgaccctcttggccggcatggccccaccctaaatgacttcctaaga
aaagggtctgttagccatccacgaatatgcccctatctgaagcggtgtacatatggattg
cggtgtaagttctaccaccctgaacgggaccctgggagacaggaaaagcaggagttgcgg
caagtgacgtcatccatctctcaggggaggtacttgagggaaacacctcaagggaatggg
ggaatgctacaaacacaagattcccaacataaggctcgagcagcccccagaaatggaggt
ccccaatatactaccagcccatatggacaacttaacatgcagtatagtgctgcactgtct
cacaggcaggcattaacgatgcgggataatggacgtgacatggagagacacaccaagtca
tcagcaacaaggactaattacgaccagactgatgggatgaatagtgaactcttcaacgaa
cttataaccattttcccagataatgaggaggcgatattgaaaataatgcgcgagaatcca
aatgctgacaagcagctactggctaatcttgttgcctcttgtgtgtga
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