Nematostella vectensis (starlet sea anemone): 5510560
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Entry
5510560 CDS
T01037
Name
(RefSeq) protein RRP5 homolog isoform X1
KO
K14792
rRNA biogenesis protein RRP5
Organism
nve
Nematostella vectensis (starlet sea anemone)
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nve03009
]
5510560
Ribosome biogenesis [BR:
nve03009
]
Eukaryotic type
90S particles
Other 90S particles
5510560
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1_RRP5
S1
OB_RRP5_4th
Spt6_S1
OB_RRP5
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
TPR_19
HAT_Syf1_CNRKL1_C
UTP6_C
ARM_TT21_N
HAT_Syf1_M
TPR_CcmH_CycH
TPR_15
Mad3_BUB1_I_2
ARM_TT21
Motif
Other DBs
NCBI-GeneID:
5510560
NCBI-ProteinID:
XP_032235582
LinkDB
All DBs
Position
Unknown
AA seq
1823 aa
AA seq
DB search
MAAKRASPEKIDFSAKRRSTSAGKSTEVILPSHIDEIDFPRGGASTLSPLEVRRIKQEAE
KDLLFGTTPVQEIKKKKKRSKSLPAERKDNNSDADLGKTSGNHVASLSFKKLCEGMKLLG
AVKEVGEFELIISLPNGLSGFVHILDINEKLMSALAKSSTEERIEDSIPSLGDLFTVNSL
VVCVVKELLSSKHGHRKVKLSLRPEDVNAGVTNIVPGFVLPGCVSSVEDHGYVLSFGIPG
KTGFLSKKKTGRVLVEGQYLNTIVESADTGRVIRVSVDQDKIKSAMISSDMKVRFSSLLP
GMLVNTRVSQCTSSGVIVSFLELFEGSVHILHLPENGGSGENLEKLYKKKSKHVARILYV
NPKNKVVSLSMLDSIIQFKLPSFESCSIGDIFDNVTITRGDQGLGLLANVKDGLNGFVHF
SQVSDKQIEKLGKKYKAGTSHKCRVLGMNTIDGLLSLTTKKSIINKPFMRYEDIKPGSIV
EGTIITLEKFGMLVSVSDHIKGLVTNMHLADIILKHPEKKLTEGKVVKCRVLTVDPGQRR
LHLTHKKTMVSSTLQVITQYSDAKPGTTSHGFITSVREYGCLVTFYNNVKGLVPKDQLGI
QESEDPRGVFYLGQVLTCHVISCNPDQQKLKLSLKANSANKSSTQVSLQTASLVDIDVVS
CSKDGLDVLLQPNGCPALLPVYHLSDHPSHWEDLLSIYTPKGKPITIRNALYYGIGKNGT
HIVSLKTSLKNAAESKTMVTNFSDIKPGMVLPGFVKLLMGYGVFVEFAPGILGLAPNSFI
ANHFVSDAASHFKIGQTLVAQVNEVDAERQRFLVSLKQSDLNPGSDWTSATAGALLEEIL
SERKHILDELASKTEDVKNLLSLPVGSCIEGKVSKVKKNGISLTLPDGLKGFVFHQLAQG
VSCLEGEVVQGCVLDLDVKKSVVELTLLPDVVKGRQNQKNKPKQMKPGQPVDFIVQLIKA
EYMVVVLPCAAFKIGYAPAKMHLNDIRDVAKRFNVGQKYRGSILESSSHCIVVSECQNSS
KENLKPGTVTSVEVRSIKPLQMNVQLGQIHGRVHVSNAADDLIQGESPFKPFQMGQKIQA
KILGFRDTKTHNFLPLTHRNFTRAVAELSLKPSMVSKTSASEVVGAVYDEKKIEDFKIGD
EVQAFVKSTSDNCIWMAINTLVSGRVELLHASNDVKVLRHLSSAFKPGNGHTCTVLDVDK
DHEVLNLSLTVKPDSQLSRDQIVPGRVTRVMPTSGLFIQLPLHKSGLVALTDIADHFTEN
PTDGYKVKQIVRCCILSKKDNGHYDLSLRPSRTTEATTQEEKDKSRTDREIGSLAALDVG
DIVRGYVSCATNIGVFVSLGRNIKARVQIKNLSHFYVKEWKPLFPVGKLVTGKVLSINPT
NGQIELSLKGRDVGGPDPAPNPKQTEETGKKRKKATKVKTVDAGEAEPESDEDVEAIVKR
LRADESDDEQGPHESEESEECNSSEPEDGDESTASQIKKIKRIQVSAGFNWSGDTEEDLG
EANVDNSSDEKNDSENESIEQVSRKKTKRQKRAAKKAEEDFLYRTEQALLDTDHTPECAE
DFDRLVLSSPNNSVTWLQYMAFHLHTTEIDKARAVAERALRTISFREEREKLNIWVALMN
LENLYGTQESLIKVFERALQHNEPKKVFFHLITIYTQSEKTELAEKLFHTMTKRFSQSKK
VWIEFGRFFMKTGKPDSARKLLQRGLKSLPTRKHVETIVQFALMEFKNGDPQRGQTVLES
VLSNYPKRTDIWSVYIDMMSKQGHPDTVRQIFERVIHMNLSSRKMKFLFKKYLDFEREHG
DEMSVEAVKTKAMEYVESKVALA
NT seq
5472 nt
NT seq
+upstream
nt +downstream
nt
atggcggccaaacgcgcatcaccggagaagattgatttcagcgcaaagagacgctcgaca
tcagcgggaaaatcaactgaagttattttgccatcacatattgatgagatagactttcca
agaggtggggctagtacactaagccctcttgaagtgaggagaatcaagcaagaagctgag
aaagatttactctttggtaccacaccagtacaggagataaaaaagaaaaagaagcgatca
aagtcactccctgctgagaggaaagataacaacagtgatgctgatcttggaaagacctca
ggaaatcatgtggcgagtctgtcttttaagaaactttgtgaaggcatgaagctacttggt
gctgtgaaagaagtgggggagtttgaacttattatcagtctacccaatggactgagtgga
tttgttcacatcttggacatcaatgaaaaactgatgtctgcccttgcaaaatcctcaact
gaggagcgaatagaggatagcattccttcattgggagatctctttactgtcaatagcctt
gttgtgtgtgttgtcaaggagctgttaagctctaaacatggtcataggaaggttaagttg
tcccttagaccagaggatgtgaatgcaggggtcacaaatattgttcctggctttgtcttg
cctggttgtgtctccagtgttgaggatcatggatatgtgctttcttttggaattcctgga
aaaacaggttttctgtccaagaaaaagacaggtcgagtactggttgaaggacagtacctg
aatactattgtggagtcagcagatactgggcgtgttatcagagtgtctgttgatcaagac
aagataaagagtgccatgatctcttcagatatgaaggtcaggttttccagtctcttgcct
ggtatgctggtcaacaccagagtctctcagtgtacaagcagtggcgtgattgtgtcgttc
ctggaactgtttgaggggagtgttcacatcttgcatctccctgaaaatggtggaagcggg
gaaaacttagagaaattgtacaaaaagaaatccaagcatgtggcacgcattctctatgtc
aaccccaagaacaaggtggtgagcctgagcatgttggactccatcattcagtttaagttg
ccctcatttgaaagctgttccattggggacatttttgataatgtgaccataacaagaggt
gaccagggccttggacttcttgcaaatgttaaagatggcctcaatggctttgtgcatttt
tcacaagtgtccgacaagcaaatagaaaagttggggaaaaagtacaaagcagggaccagt
cacaagtgcagagttttaggcatgaacactattgatggcctgctttccttaacaacaaaa
aagagcatcattaataagccatttatgcgttatgaagacatcaaacctggatcaatagta
gaaggcaccatcattactcttgagaagtttgggatgcttgtctctgtgtcagaccacatc
aagggactggtgaccaacatgcatttggcagacatcatccttaaacaccctgagaagaag
ctgacagaaggaaaagtggtcaagtgtagggtactgacagttgatccaggacaacggaga
ctccatctgactcacaagaagacaatggtgtcttcaactcttcaagtgataacccagtac
tctgacgccaagcctggaacaacatctcatggattcattacatctgtgagagagtatggt
tgtctagtcacattttacaataatgttaaaggacttgtgccaaaggatcagttaggtatt
caagagtctgaagatccacgcggtgtgttttacttgggccaagttctgacctgtcatgta
atctcctgtaatccagatcaacagaagctcaaactaagtctaaaggctaactcagctaac
aagtcctcaacacaagtttccttgcagactgcatcgcttgtagatatagatgttgtaagc
tgcagcaaggatggattggatgtgttactacaaccaaatggatgccccgccttgctacct
gtctatcatctttccgaccatccatcacattgggaagatttgctatctatctatacccca
aagggcaagcctataaccattagaaatgcattgtactatggcattggaaagaatgggact
catattgtttctcttaagacgtctttgaaaaatgctgctgaaagtaagacaatggtgaca
aacttcagtgacatcaagcctggtatggtccttcctggttttgtcaaacttttaatgggc
tatggcgtctttgttgaatttgctcctggcatacttggcttggctcccaattctttcatt
gccaatcactttgtatcggatgctgcttctcatttcaagattggacaaacattagttgca
caggttaacgaggtggatgctgagaggcaacggtttcttgtgagtctgaagcagtctgac
ttgaatcccggttcagattggacctctgccactgctggtgcattgcttgaggaaatcctc
tccgagaggaaacacatcttggatgaactagccagcaagacagaagatgtgaaaaatttg
ttgtccttgcctgttggaagctgtattgaaggaaaagtaagcaaggtcaagaaaaatggg
atctctcttactctccctgatgggctcaagggtttcgtctttcatcagcttgctcaaggt
gtcagctgcctagagggcgaggttgtccagggatgtgttctggatcttgatgtcaagaaa
agtgtcgttgaactgaccctattgccagatgttgtcaaaggaagacaaaaccagaagaac
aaacccaagcagatgaagcctggccaacctgtggatttcattgtacagttgattaaagca
gaatacatggttgtcgttctgccatgtgctgctttcaagattggatatgcaccagcaaaa
atgcatctgaacgatattcgtgatgttgcaaagcggtttaatgttggccagaagtaccgt
ggctctattctggagagttccagtcattgtatagtcgtttctgaatgccagaattcttcc
aaagaaaatctaaagcctgggactgtaacatctgttgaggtgcgaagtatcaagccattg
caaatgaacgtccagctgggccagatccatgggagggtacatgtgagcaatgctgccgat
gaccttattcagggcgaatctccatttaagccattccagatgggtcagaagatccaagct
aagattcttggtttcagggacactaagacacacaatttcttgcctctgactcataggaac
tttaccagagcagttgcagagctttcattaaaaccaagtatggtcagcaaaacgtctgct
tcagaggttgttggtgctgtctatgatgagaaaaaaatagaggatttcaagattggtgac
gaggtccaggcttttgtcaagtctacttcagataactgcatttggatggccatcaataca
ttggtcagcggacgtgtggagttgttacatgcgtcaaatgatgtcaaggtacttcgtcat
ctaagctctgcattcaagcctggaaatggtcacacttgtacagtactagatgtagacaag
gaccatgaagtactaaacctctcactcacagtgaagcccgactctcagctatcacgtgac
caaattgtgccaggccgtgtgacgcgtgtaatgcctacttccggtctgtttatccagctt
ccgttgcacaaaagcggactggtggcccttacagacatcgccgatcacttcactgagaac
cctacagatggctacaaagtcaagcagatcgtacggtgctgtatactatccaagaaagac
aacggccactacgatttatcccttagaccttcaaggacgacagaggccacaacgcaagag
gaaaaagataaaagccgtacagatcgtgagatagggtccctggcagcacttgatgtgggc
gatatcgtgcgtgggtatgtgagctgcgccacaaacattggggtgtttgtcagtcttggg
cgaaacataaaggctcgcgtccagataaaaaacctgtcacacttctatgtcaaagagtgg
aagcctctctttccagtgggcaagctagtgacgggaaaggtgctaagcatcaaccccact
aacggacagatcgagttgtccctaaagggtagggacgtggggggtcctgaccctgcccct
aatcctaagcaaaccgaggagacggggaaaaagaggaaaaaggcgaccaaggtgaagact
gttgatgctggcgaggctgagccagaaagtgacgaggatgtggaggcgatagtcaaacgc
ctcagagcagatgaatctgatgacgagcagggccctcacgagagtgaagagagcgaggaa
tgcaattcatcggaaccagaggatggggacgagagcactgcgtcgcaaatcaagaaaata
aaaaggatccaggtgtcagctggattcaattggagcggtgatacggaggaggacttgggc
gaagcaaatgtagataacagcagtgatgagaagaacgacagtgagaacgagtctatcgaa
caggtttcaagaaagaaaactaaaaggcagaaaagagctgccaagaaggctgaggaggac
tttctttacaggacggagcaggctctccttgacaccgaccacacccccgagtgcgcagaa
gacttcgaccgcctggtcttatcctccccgaacaactcggtcacgtggttgcagtacatg
gccttccacctacataccactgagatcgacaaggcacgcgctgtggccgagagggcactg
aggactatttccttcagggaggagcgggaaaagctgaacatctgggtcgcactcatgaac
ctggaaaacctttatggcacacaagagtcccttattaaggtgttcgagcgggccctacag
cataatgaacccaagaaagtgttcttccacttaattaccatctacacacagtctgaaaaa
actgagctagcagagaagcttttccacactatgaccaaacgtttcagccagagcaagaaa
gtttggatcgaatttgggcggtttttcatgaagacaggcaaaccggactcggccaggaaa
ttgctacagagagggttgaagagtctgcccaccaggaaacatgtggagacgattgtacag
tttgctttgatggagttcaagaatggcgaccctcagcgcggtcagacggtgcttgaaagc
gtccttagtaactaccccaagcgcacggacatttggtctgtgtacatcgacatgatgagc
aaacagggacatccggataccgtcaggcaaatcttcgagcgtgtgatccacatgaaccta
tcctccaggaaaatgaagtttctattcaagaagtacctggacttcgagcgcgagcatggc
gacgagatgagcgtggaggcggtcaaaaccaaagctatggaatacgtagaatccaaggtg
gccttggcatga
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integrated database retrieval system
