Nematostella vectensis (starlet sea anemone): 5510585
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Entry
5510585 CDS
T01037
Name
(RefSeq) polycystic kidney disease protein 1-like 2
KO
K04988
polycystin 1L2
Organism
nve
Nematostella vectensis (starlet sea anemone)
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nve04040
]
5510585
04091 Lectins [BR:
nve04091
]
5510585
Ion channels [BR:
nve04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
5510585
Lectins [BR:
nve04091
]
C-Type lectins
Others
5510585
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
REJ
PKD_channel
PKD
Polycystin_dom
PLAT
PKD_4
Ion_trans
GPS
F5_F8_type_C
DBB
Motif
Other DBs
NCBI-GeneID:
5510585
NCBI-ProteinID:
XP_032235683
LinkDB
All DBs
Position
Unknown
AA seq
3016 aa
AA seq
DB search
MLGITVEGTESEWVSQFYLQYSVDLITWYCFGSDDEAEVLTLTEGSGTKTMFSRPIAQFV
RINPQAWHGRICLRTEFYGCSLVASSGFDYPSPMQGRCGLILTQAPATLQPTTATSLKPA
TTMPETRIKYLRIRLGSHLLQTGAEFLVALFFHEGEDVRYTWKMGDGGPAIERSRPLAFQ
HVYHRPGVYQISVFAYNRVSNMTDAVSVVVQDAIEGLKPLSTVAPKEPNERFNVSWNIEK
GTNVSFFLEFGDGTSSMTIKQLGAGPYSIDHAYLNVGHFLIRVTASNQVTPEVRLDFDVI
VENKVEGCTARWNFQRQFIPGRKEIYLAIGESVSVNVNVLSGTEPKYNFNFGESEVINMT
SGIIKYAFKITGSYTLSVTCFNHINSLSYIYDHMIVIQPDETITHLSISTAPTELGRASK
FVSSKATGTAFICKWTFGDKNEATRDFTDFHDPVYNQYSTAGEHFVSLCCQNRHGITCAS
TLAKVIVRVKNITTSLIGPSILTKGSIAIFRIDISGGLAVNYGLTIYGGGTQKYLESEVT
SNKSYEFYYLFARSGSFVITGFAWDGWTTLNASCDELIIIQNPIKDMTLTFQTPVSLQDS
AVEFYLRVEGEFPSNVTCLWAFGDNTSVCTYLDYNAGKPQRVVHHYKSDGIFHIYVNCSN
LVSAYSINKTLFIHKIVNPEVNVTRLSSGTGTFPYFLSNDRVQFCVTTQRFDQSYNWVWR
NGNGSGNLDNLPCVIYTLTSVGEHEITVQVNNLLKKLSAKTRIIVQKKLFGLAINATGKF
LAREEIRISWSAAEIGTNTCYHLNMGDGSKSVAYGSVACTSRSPVYNISKWMNIHSYRYQ
LDGNYTVLISGVNQVSHVTESLLVTIRKRICEVNELQIFPSGNTTYKFKKRDGFVIRAKN
SVNCVLSEKVLFQWKLLTLSGKELSLPSSVAFNSTMISVPARELDYGDYLVRIKASVTGR
VITELYGEVTREDTVTITIIPSRLVAVIKGDKKRDIAPNSFFSLDGTQSYDPDAKIPTYL
QYRWYCRTAISDGAEVGCYRIYPRPIDVLWRGSVFYTNSDDITRSRTYIYTLEISVGDRV
ASAQQEIFVTFGTAPNMEIMCKPICSGRLMEVKHLALLSKCAICSDMDKLFFNRRVFDVT
AGRNVSMNIQPSQTKFGLSSQRFEIFPGLFIADHVYRVIHHAWFEGGVSGTANYTFMVYK
NTPPQPGNCTVSPSEGFAMDTFFRINCTGWKDPEQPLTYTYYYTMDAIKTTLYSGPKESW
KFMLPVTQGIENSTILVIALVEDYYKLGTSAYMQVLVKKPKQYTVSKIMNQVSQLGGNTG
SFESNSSASASRMSVPQIVQLASAITYSLNQDSQAKRDSGNSSTTNETSAVKVQIRERVV
LQLQEAVSLIRNKSSPTVTDLDLVSSALKDATTETKELSATAVVSSTVSLEGIVDALKSS
CATTVRDAVARKLVQVMSNILESAGLKEMTSKTIEQERRTSNDVKNMARELTGKVFQALR
DVGSVLLSRASVGDAPLQIFSANVNLTLERNDASSIGNKSVTCTKGSVKLPRTESLNINI
RQENNTIDIQLAELRNPFTWSVTSKNMTSSVVDLVLMKNDGSSYDVRDTNEDIELNFFIT
KKPEDTSRALQWYWVVQENESRRIHQIDWTSPATAINMEVAVESSSIVQWKVLFNFGKEP
SSKDYVLSWSLTSMANTSGQLHTFPLRRTFLPYQGLYYVLITPDLTKQQTLLWRSGDLNI
SYGLGFYESGCWYWDEKQDKFSSKGCKVGPKTSRSNTQCMCDHLTSFVSKFVVVPNAIDF
AAAMTGFLELSENPVAFSAVMTIFGIYLILLVWARKRDLIDDDQFQVKVVFLQDNNHQDK
YIYQITVYTGMRKHAGTTADVFCVLVGDENETRPRLLKDPAKIRFKRAGVDTFILATPVH
LGKLTSIKLWHNNMGSDPFWYVNKVSVRNVLRGQVYHFLCSRWFAVEHDDGQIHRTISVA
SKGDIETFSHLFYHASHKNITDGHLWFSVFTRPAKSRFTRVQRLSCCLTLLYCAMLANAM
FYGLGNESNPAFTVRAGPLIFTPQQIFIGIASSLVIFPVNLCIVGIFRSVAPKKRKEPNE
NTLTSQNAPEIAETEDLSHLIQWYKCAGQLDVESGHIIAYDNFAVEDKWLPGEQAIDLNF
NGITNLRRPSQHHKPPKQLPHGFVYIGWFVVISLSFTSAFFVTLYGFQFGKKKAAEWLTS
MLISVVQDVLISQPIKVLVVALIIALFVKEIDEDPSIDPEQHKMHLAGGTGGKIKMTSHV
SWLPSCKPPDTKELKKAREKRLNEIKMNLLIKELIIYVLFLAALLLVGFAHRDPQAFQVA
KLMTETFIDGAYAGNGCVQSPGVTNYWKWIENTVVPSLSSDQRAWAPGCQPLTEYAIDCD
SRVVGTARLRQLRVPPDSCSVPQIMRNVSSGCNTFYSFFGEDTSHYTEGWKATNVTQVTA
HSPWLYHSTLALDGLPYLGLLATYSGGGYTVELHNTDNGKQQLQTLKKLSWIDHRTRALF
VDISIYNAQVNMFGIATFLAEWIPTNGVLFFNNIKVARLYVAGGDLQAANIAAKFFVVLL
FCIFIYDEAKQIRTLRKKYLKDVWNWLEITLIILIIGCSVTLLKRSTLTYLAIKKIQEEP
KKFVSLIQAATMDELLTYFEGLLVFVANMKLLKLCRFNHRIFMFTKTLSTAVEPLLSFLL
VFLIFYLAYSSIYYLVFGSGIYEYRSMVSTIETLFSTLLGGYDYHAIANHDPILGPALFF
SFQMIMVMILMNVFLTILMDAFAEVQADTSFQSNKHELVDYMTAHFKQFLKLRNKVQDVG
NSRQDINNCLTDTFDKKLYRKLIPSIDSVRKDETLDGPNEQGEVPIDSASEADDTASSTT
SLDPLEMAILRAVKKNRERQIIDDDNFNFDNYKIITSGTNCVEYTAMRSHALQYTPDKTP
YKLLDGIKGSFARVGLDELLMDAVYEKLLRYYVKEVKERVLAEKIRRQNELSNWQLGASR
TTENPSKLKVYSRYGL
NT seq
9051 nt
NT seq
+upstream
nt +downstream
nt
atgctagggataacggtagaaggaacagagtcggagtgggtctctcagttctatcttcag
tatagcgtagacctgatcacctggtattgctttggaagcgacgacgaagccgaggtattg
accttgacggaaggtagtggcacaaagaccatgttctctcgtcccattgctcaatttgtc
cgcatcaatccccaagcatggcatggcaggatatgtctacgcactgaattctatggttgc
tcattagtggcgtcttcaggttttgactacccgtctccaatgcagggacgatgtggctta
attcttacacaggccccagcgacactacagccaacaacagctacctccctcaaacccgca
actactatgccagagacaagaatcaaatacctcaggatcagacttggaagccaccttttg
caaacaggagcagaatttctggtcgcactcttcttccatgagggagaggatgtccgatac
acttggaagatgggagatggtggtccagcgatagagcgatccagacccctcgcctttcaa
cacgtgtatcacagacctggagtgtaccaaatctccgtattcgcttacaacagggttagc
aacatgaccgatgctgtgtcggttgtcgttcaagatgctatcgaaggacttaaaccatta
agcaccgtggctccgaaagaaccaaacgagaggtttaatgtttcgtggaatatcgaaaaa
gggaccaatgtttcattcttcctggaattcggcgacgggacctcttcaatgactatcaag
cagcttggagcgggtccatactctattgatcacgcttatctcaacgtcggtcactttctg
ataagggtgaccgctagtaatcaagttacaccagaggtcagactggacttcgatgtcatc
gtcgaaaacaaagttgagggttgtacagcacggtggaactttcagcggcagttcattcct
ggaagaaaagagatatacttggctattggagaatctgtaagcgtcaatgtaaatgtgcta
tcgggaactgaaccaaagtacaactttaattttggtgagagtgaagtaattaatatgaca
agtggtatcattaagtatgcattcaaaattactggtagctacaccttatcggtaacttgc
ttcaaccacataaactccctaagttatatatacgaccacatgatcgtcattcagccagat
gagaccataacgcatttgtcaatttcaaccgcccctacagaactcggaagagcaagcaaa
ttcgtatcttctaaagcaactgggacagcattcatatgtaaatggacgtttggagacaaa
aatgaagctactagggatttcactgatttccatgacccggtctataatcagtatagcaca
gctggcgagcattttgtgtctttatgctgccaaaaccgacatggcattacttgcgcaagc
acattggctaaagttatagtacgagttaaaaacatcacaacgtctttgataggtccgtcc
atacttactaaaggctcaatagcgatttttcgaatagatatctctggaggattagctgtt
aattatggccttactatctatgggggtggaacgcagaagtatttggaaagcgaagtcact
agcaataagagttacgagttttactacctttttgctcgcagtggaagctttgttattacc
gggtttgcttgggatggatggaccacattaaacgcctcttgcgacgagcttattataatc
caaaacccgatcaaagatatgacactgacgttccaaactccagtaagtcttcaggacagt
gctgttgaattctatctgcgtgtcgagggagaattcccttccaatgtcacttgtctctgg
gcgtttggtgataataccagcgtctgtacttatctagattataacgcaggaaaaccgcaa
agagttgttcaccattataaaagcgatgggatctttcatatttacgtcaactgctcaaat
cttgttagtgcatatagtataaacaagactttattcattcacaagattgtcaaccctgag
gtgaacgtgactcgtctgtccagcggcactggaacattcccatattttttgtctaatgat
cgcgtgcagttttgtgttacaacacagaggtttgaccaatcatacaattgggtatggagg
aatggaaacggctcaggaaacttggacaatcttccttgcgtaatttatacactaacttcg
gtaggtgagcacgaaataacagttcaagtaaataatctgctaaagaaattgtctgccaaa
acaagaatcattgtccaaaagaaactgttcgggctagccatcaatgcaactggaaagttt
ctcgcaagagaggaaatccgtatctcttggtcagcagctgagattggtacaaacacgtgt
taccacctgaatatgggcgatggaagcaaaagcgtagcatatggatcagtagcctgtacc
tcaaggtcacctgtctataacatcagtaaatggatgaacatacattcttatagataccaa
ttagatggtaactacacagtgctaatcagcggcgtaaaccaagtttctcatgtcaccgaa
tctttactggtaacaataagaaaacgaatctgtgaagtaaatgaattacaaatatttcca
agtggaaatacgacttacaaattcaagaaaagagatggctttgtcatcagagcgaagaac
agcgtgaactgtgtgctttctgaaaaggtactatttcaatggaagttacttacactgagt
ggcaaggaactttcactaccctcaagcgtagctttcaacagcacaatgataagtgtcccc
gctagagaactagactatggtgattatttggtcaggattaaagcttccgtaactggtcga
gtaataaccgaactgtacggagaagtgacaagagaagacacggtaaccataaccatcatt
ccatcgcgcctagtggcggtgattaaaggagacaagaagcgagatattgctccaaattca
ttcttttccttggatggcacgcagtcctatgatcccgatgctaagattccaacttatctc
cagtaccgctggtattgcagaactgcaattagtgacggagcggaagtgggatgctatagg
atatacccgagaccaattgatgttctctggcggggatcagtgttctatacgaactctgat
gacattacgcgcagcagaacgtacatttatacactggagattagtgtaggcgatagggta
gcatctgcacaacaagaaatatttgtcacttttggtaccgctcccaatatggaaataatg
tgtaagccaatatgctcaggaaggttgatggaggtcaaacatctcgctctcttaagcaaa
tgcgcgatctgtagtgatatggataagctgttcttcaaccggcgagtattcgacgtaaca
gcaggaagaaatgtatctatgaacattcaaccatcgcagacaaaattcggtttgtcaagc
cagcgtttcgagattttcccagggctattcattgcagaccacgtctaccgggttattcat
cacgcatggttcgaaggtggtgtttcaggaaccgccaactacacgtttatggtttacaag
aacactcccccacagccggggaattgtacagtttctccgtccgagggttttgcaatggat
acatttttcagaattaattgcacaggctggaaagatcctgaacaacctttgacatacact
tattattacactatggacgcgattaagacgacgctgtattcgggacccaaagagagttgg
aagtttatgctacccgtcacacaaggcatagagaactcgactatcctagttatagcactt
gtcgaagattactacaagcttgggacaagtgcatatatgcaagttctggtaaaaaagccg
aagcaatatactgtatcaaaaattatgaaccaagtgagtcagctgggcggtaatactggt
tcctttgaaagtaacagcagcgcgtctgcctcgcgtatgagcgtcccacagattgtccag
cttgcaagtgcaattacttactccttgaatcaggacagccaggcaaagcgagatagcggc
aactcaagcacaacaaacgagacctcagcagtcaaggtccagatacgagagagagtagtc
cttcagctccaggaggctgtctcactgattcgaaacaaaagctcaccaacagtaaccgac
cttgatcttgtcagcagtgcattaaaagatgccacgactgaaacgaaggagctctccgcg
accgcagttgtttcaagcactgtctctctcgaaggcatcgtagatgcacttaagtcctct
tgcgcaacaactgtgagagatgcagttgctagaaaactggtccaagttatgagtaacatt
cttgagtctgctggcttgaaagaaatgacatcaaaaactattgaacaagagcgaagaacg
tcaaatgatgtaaagaatatggctagagaattgactgggaaagttttccaagcccttcgc
gatgttggtagtgtgttactatcaagagcatctgtaggagatgcgcctttacagattttc
tccgcgaacgtaaacctaacgctagaaagaaacgacgcatcttcaataggcaataaatcc
gttacatgtactaagggaagcgttaaactaccacgaacagagagtctgaacataaatatt
agacaagaaaataatacgattgatatacaattagcagagctgcgtaatccgttcacatgg
tctgtgacatccaagaacatgacatcgtcggtggtcgatctggtgctaatgaaaaatgac
ggaagctcgtacgacgtccgcgacacaaatgaagacatcgaactgaacttttttatcacg
aaaaagccggaggatacaagcagagcactgcagtggtattgggtagttcaggaaaatgag
tcaagaaggatccaccaaattgactggacaagcccagctacagccattaacatggaggta
gcggtggagagcagttccattgtacaatggaaagtactatttaactttggaaaagagcct
tcctctaaagattatgttctgtcatggtccttgacttcgatggcaaatactagcggacag
ctgcatacgtttccactaaggcgaactttcctgccgtatcagggtttatactatgtgttg
attactccagatctaaccaagcagcaaacactgttatggcgatcaggagatttgaacatt
tcctatggactaggattctatgagtctggatgctggtactgggacgagaaacaagataag
tttagctcgaaagggtgcaaggttgggcctaagacaagcagaagtaatacccaatgtatg
tgtgatcatctgacgtcttttgtctcaaagttcgtcgtcgttcccaatgccatcgacttt
gccgctgctatgaccggtttccttgagctgtccgagaatccagtggcattttctgcagtt
atgacgatctttggtatttacctcatattattagtttgggcgcgaaaaagagacctcata
gacgatgaccagttccaggtcaaggtcgtgtttttgcaagataacaaccatcaagataag
tatatttaccagatcactgtttacactgggatgcgaaaacacgcaggtacaactgccgac
gtcttctgtgtgctagtgggagacgagaacgaaacaagaccacgccttctaaaagatccc
gcaaaaatacgatttaaaagagctggtgtcgacacatttatcctagcgacgcctgttcac
cttggaaaactcacgagtataaagttatggcacaataatatggggtcagacccattctgg
tatgtgaacaaagtttccgtacggaacgtcctgcggggacaggtctatcacttcctgtgc
agtcgatggttcgcagtagaacatgatgatggacagatccataggacaatatctgtcgcc
agtaagggggatattgagaccttcagtcatttattctatcacgcatcccacaagaacatt
actgatggacacctatggttttctgtctttactcgaccggcaaaaagtcgttttactaga
gtgcaaagattgtcttgttgcttgacgctattgtactgtgcaatgttggcaaacgcgatg
ttctacggattagggaacgagtccaatcccgcttttactgtaagagctggaccactgata
tttacccctcagcagatcttcataggtattgctagcagtttggtaatatttcccgtgaac
ctatgcatagttggcatattccgtagtgtggcaccgaagaaaaggaaagagcccaacgaa
aataccctaacctcgcaaaacgcaccagagatagcagaaacagaagatctctctcacttg
attcagtggtacaagtgcgcaggacagttagacgtcgagtctggacacataatagcctac
gataacttcgcagtggaagataaatggctccctggtgaacaagctattgacttaaatttt
aatggtattactaacttgagacgaccgtcacagcaccataagccccccaaacagcttcct
catgggtttgtctatattggctggtttgttgttatatctttgtctttcacttctgcattt
tttgtcacgttatatggatttcaattcggcaaaaaaaaggcggccgaatggctaacttca
atgcttatatcagttgtacaagacgtgttgattagccaaccaattaaagtccttgttgtg
gcattaatcattgctttatttgtaaaagagattgatgaggatccgagcatcgatcctgag
caacataaaatgcatctagccgggggaacgggcggaaaaatcaaaatgacttcacacgtt
tcatggttaccatcatgtaaaccgccagacacaaaagagctcaagaaagcgcgagaaaaa
agactgaatgagatcaaaatgaacctgttaataaaggagttaatcatatatgttctgttt
cttgctgctttgcttctggttggatttgctcatcgagatccacaggcgttccaagtcgcg
aaattgatgacggaaaccttcatcgacggagcatatgctggcaatgggtgtgtacagtct
cccggtgtcaccaactactggaaatggattgagaatacggtagtcccaagtctctcatct
gatcagcgcgcatgggcgccaggatgtcagccgctgactgagtacgcgattgactgtgat
tcacgggtggttggtacagccaggctgaggcagctccgagtccctccagattcatgttct
gttccacaaatcatgaggaatgtcagcagtggctgtaatacattttattctttcttcggc
gaagacaccagccactacactgaagggtggaaagctacaaacgtcactcaagttacggca
cactcgccatggttgtaccactcaacgttggccttagacggccttccgtacctggggcta
ctagctacttatagtggcggcggatatacagtggaactccacaacacggacaacggcaaa
cagcaattacagacgctgaagaaactatcttggattgatcaccgaacgagagcgctattt
gtggacatcagtatttacaatgcccaagtgaatatgttcggaatcgctacgttccttgcg
gaatggattccaacaaacggagttttattttttaataatataaaagtggcaagattatac
gtagcaggaggggatctccaagcagcaaacatagcggctaaattttttgttgtgctatta
ttttgtattttcatttacgatgaggcaaagcagattcgcacattgaggaaaaagtactta
aaggacgtctggaattggcttgagataacattgattatcctaattataggctgctctgta
acccttcttaagcgatccacactgacatatttagctataaagaaaattcaggaggaacca
aagaaattcgtgagtctgattcaagcggcgactatggatgaattgctcacatacttcgaa
ggactcttagtgttcgttgccaatatgaaactgcttaaactttgccgctttaatcaccgt
atcttcatgttcacaaaaactctctcaacagcagtagagccgctactgtcattcctcctt
gtgtttcttatattttacctcgcttactccagcatctattacttggtgttcggatctggt
atctacgagtacagatccatggtttctaccatagagaccctgttcagtaccctactggga
ggatacgactatcacgctatcgcaaaccacgaccctatcttaggtcctgcactattcttc
tcattccaaatgataatggtaatgatacttatgaacgtttttcttacaatccttatggac
gcattcgcggaggttcaagccgatacgtcgttccagtcgaataagcacgagcttgtggac
tacatgacggcacatttcaaacagtttttaaagcttagaaacaaagtgcaagacgtcggc
aactcgagacaggacatcaacaattgtttgacggacactttcgacaaaaaactctacaga
aaacttatcccaagtatcgactccgtgcgcaaagacgagacccttgatggaccgaatgaa
cagggagaagtgcctattgacagcgcgagtgaagcagatgatacggctagctcaacaact
agtttagatcctctcgagatggctattttacgagcagttaaaaaaaatcgggaacgacaa
ataattgatgacgacaatttcaattttgataactacaaaattataacaagtggtacaaat
tgcgtggaatatactgcaatgcgaagccatgcgttacaatacacgcctgataagacacct
tataaattattagatggcataaaaggaagctttgcaagggtgggtttggatgagttgctg
atggacgcggtatatgaaaaactgttgcgttattatgtaaaagaggtaaaggagagagta
ctcgcagaaaagataaggcgccaaaatgagttatcaaattggcagctaggcgcatcaaga
acaaccgaaaacccttcgaaattgaaagtgtactccagatatggattatga
DBGET
integrated database retrieval system
