Nematostella vectensis (starlet sea anemone): 5510717
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Entry
5510717 CDS
T01037
Name
(RefSeq) polycystic kidney disease protein 1-like 2
KO
K04988
polycystin 1L2
Organism
nve
Nematostella vectensis (starlet sea anemone)
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nve04040
]
5510717
04091 Lectins [BR:
nve04091
]
5510717
Ion channels [BR:
nve04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
5510717
Lectins [BR:
nve04091
]
C-Type lectins
Others
5510717
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
REJ
PKD_channel
Polycystin_dom
SRCR
PLAT
Ion_trans
GPS
WSC
SRCR_2
Motif
Other DBs
NCBI-GeneID:
5510717
NCBI-ProteinID:
XP_001631171
UniProt:
A7SB32
LinkDB
All DBs
Position
Unknown
AA seq
2926 aa
AA seq
DB search
MRNNYSFFLLLIVFCKEADVCAALNHRKGDVRLVGGLNQYEGRVEIYYNNEWGTICDHDW
NIAEAMVVCRQLGFVTALYNPHNAAFGQGIGTIWLDSVTCNGSEDSLLSCSGIGTFGRTS
CTHARDASVVCQQPTVPAKITHLGCYADTAQRALRDMLATFEIPSDSMVEDCAQKVAAAG
YRYFGFQYNSQCFSDEEGGSRYFKYGKDYGCSQNGTGGTWAQNIYKLNTMYVNMTVDITA
KKYDINMLSHVSDNYRELRAKMRETLDPVLTLLDGTWIVRHMRLWPGTGVLMEISILNIA
GNDTLKLFKERMLLALAEKELNHNATHIGAYGASCMPPYIRVHISKNSSAPTLFMCSEHR
YLLSTTLFSCGDVKYDWSFWTLNKTEVTGPRNTITTTKNALIKAASLKAGDYFVRLSASV
DYVQGMVSYSYGFVRVTAAKPRVKFLRNESSFFLWADDPWIRINVSLVTPNTCPPDQAYV
NITSQYTVYWFCWRYPESMRFYKEGDLDTIPVVDQIPRPEKDNGGCFGRGPGRMNVTKDW
YLLDPSRIVPRGESIYIGARVVMGNVIVDYSYDTYQIDEPLEKSNISISTPEAKLSATST
MTLPLSSTTLLSSPLSSSSLLITSLLSSLSSLSQSPSLLAPLLSSTSTSTLPSLPIKTIT
TFTRSADTSLNVTFLTPTSAFAISTTVTRNANSRCSVPTARISSLGRSLLNPLTVPRSKS
HTIKGEVDLNCDSINGTRFLWTVRAVNISGDITSDEQIVGVNSAQWTISKHSLAYGMYIV
QFTVHTSGERDYTAIDYGILNIVQSPLVAVVLGGDFVVRGRDQMINLDASNSYDPDVGRE
LYDEMSFTWLCRVQGELWPQSDLTSLPYVTQASASGAGCFGTGIGRLRGLPNNPRRLVIE
KGLLQENRNYEFVIVVRKGNRESLGQQVVSIILGDPLVTYLRCKFNCGGKVNPSSKLSLD
VLCDGGICTADTSYSWSLSVQSGTDSSGQLTFQPITDSLEQLTSTALTAPSIVINPFSLT
GGVTYRSEVIVTSPGRAASSNQYLFTTNQPPSEGSCHISPTTGLAMITSFNMSCTGWQDN
ETPLEYQFRYRKSDGTYALIYYGDKMETSAVLPAGREENDFNFDIEATVSDSMGAANQTT
LLVQVTPQQLSPNNNILTTTLERLTVGRHSSLGTLLQSGEVGGATQLANAVLSTLDDLDN
STQNHTVSKESKITIKEEIFLGLANVKVDSIKIITQTSAVFATGTNNKDDLSHTSQEITL
KTFDSYAEVLEKKSKDDDQDPEEMEKAAKNLLHGTGNILAAASDEAKVYGTEASKTTDKT
KQESKERALQADNLIARLSRSVLGRKEAGESPTVFKSLKMTVMLSRDLPDRIGGQVFDEG
GCMIALPANPFSQNSARLQTVDTQLRVIQFNPYTWGGMAALITSKVTSLSFQESSGKAIS
VEKLKDPIRMTIPLSLPYTMPPPIRSFVKPSSPQRRKIYVQVAGSSYTLTVQITSGHVSL
FVDRSRDVSKSKNLHKAVIPDDNRCKGMSGCDPYSVVIPGSVLAQKGYYYYILMHHAEEG
EQPESSRVRRDCGSHGRQKRSCVDIKDPPTTPPPQNITIVPKFDAKTDVNVSLSGSMASC
LYWSMEKQEWTSEGCQAGNESTPQGIACVCNHLTSFGGDFLVPPNPIDFDVVILAFSDIA
ESRNYSVIATVGTVLMVYLFVVVLARRADRKDRKKTGPKISLNQRGSDHASYEVTIATDI
WINSGTTADVALIVCGENATSDVIVIRHADFPNRILFARGNNDRFIIHVPTPLGKLLRVK
IWHDNEGNSPAWLLRSVTVHATNSEDRYVFPCNRWLAVDKDDGMLDCTLTPHYGLSALKT
SFAEKSANDFADDHLWVSVVARSPCNFFSRVQRATCCLSLFTSAMIANAMFYNIGGKSEK
VFRLGPMEFGLRQIVIGVQSGLIVAPINLLIAQLFKIGSNFQESYQEKYPIPGNSSKDFS
FDYKPLKKKAERPTVALYAVFTFIGYFLAFAVVITSGAFTIFYSMQWGTEISNQWLSSML
VSFVQDLFILQPIKIVVIAVLVTLICRKATRNKAGPVIETARVERNRNYEINGNDVMCGS
LTETEKEEARQRRVIEKSATKKIKQMIVYVIFMVLMSVVCYGNRADHGFYMTQALQQSFR
NFDKISKKTDLITWLNGSLLAGLYPAPWYNGLSESNTAYIGDKCSILLGLSRLKQSRVQT
GHCTIPKEVRLRFSTCYASYSHSREDTTLANLPGWKPFTPSPLTSLNTTSDNITTALTPD
NCPKPWKYHEASSLATLPYWGQKAVYGGGGFVANLGYSESVARRVINDLARDGWFDRQTR
AVLAIFSVFNANTDYVSFVNFLAEALTTGTIRPSHRITTIPLYPTSLLYLVFQLLFLLYV
MLYLVLICVEVYKKKLPYFKDIWNWLEMLIILFSVATTAVQFVKGIYLTDIVTKIRSNPY
GDFSFDYIVMGTELEESLMACLVFFSSLKLMKLVLLHVRVVVISSTMRVSFIRLLPFSFI
FIVILLAYAQLGILVFGTMETSYATVYNALVTELMLFIGGDTRINELREVNRVMAPFYVI
SFMVFMGFILMNVFVAILNEAQFQQKTSLDELSNDVKVIDLINDKIRTVLRLPPKQTRKA
ETFVTKMQANRSNRQIRDNRDDNVAKVDMGLGATVQYKSLPCKDSENSRQGQEEDSPLGK
QLEDADTSLRVRVQSDSREGLNDDSTMRRKLARATARMIKRQELYKHMNIIHDKLRRAQV
LLDLVSLDETSVYMKFTEMLLKVESVRGLSESSPTVPDSETDDDLFPEKGELFQRRSSTV
EFPDLVERRTSTLTLSDMWLGASLHNENEIKSVFPRPKPVIGNANKQFRPVVIGTQSAVQ
LSHLAKGSDRFTQQITTSSSKVGTPVPRGINFSLPKKTYSWSPKKK
NT seq
8781 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaataactattccttcttcttgcttctgatagttttctgcaaggaagctgatgtc
tgtgctgcattaaaccaccgcaaaggtgatgtccgtcttgttggagggctcaaccagtac
gaagggcgtgtcgagatctactataacaatgagtggggtactatctgtgaccacgactgg
aatattgcagaagcaatggttgtttgtcgccagttggggttcgtgacagcactatataac
ccacataacgcggcattcgggcaaggcatcggtaccatatggctagactcagtgacatgt
aacggatccgaagactctttgttatcctgtagcggtattgggacgtttggtagaacctcc
tgtactcatgcaagggacgcaagtgtcgtctgccaacagccaacggtcccggccaaaatc
actcacctgggatgttacgctgatacagcccagcgagcgctgcgggacatgctcgctacg
tttgaaatcccgtcagattccatggtagaggactgtgctcaaaaggtcgcagctgctggc
tatagatactttggttttcagtacaactcccagtgcttcagtgatgaagaaggcgggagc
agatactttaaatacggcaaagactatggatgctcgcagaatggaaccggtggaacctgg
gcgcagaacatatacaagcttaacaccatgtatgtaaatatgacggtggatataacagcc
aagaagtacgacatcaatatgctctcacacgtgtctgacaactacagagagcttcgagca
aaaatgagggaaacgctcgatcccgtattaacgttgcttgatgggacgtggattgtcaga
cacatgagattgtggccaggcacaggggttctcatggaaatctccattctgaacatcgcc
ggaaatgatactttgaaattattcaaagagcgtatgttgctagccctagctgagaaggag
ttaaaccataatgcaacgcatatcggcgcttatggtgcaagctgcatgcctccatacatt
agggtccacatcagcaaaaactcatccgctccaaccctttttatgtgcagcgagcatcgt
tacctgttatccacgactcttttttcctgtggagatgtaaaatacgactggtccttttgg
acacttaacaaaactgaagtaacgggacctcgtaatacaattacaacaaccaaaaatgcc
ttaatcaaagctgcatctttaaaagcaggcgattatttcgttagacttagcgcaagtgtg
gactacgttcaaggcatggtcagctacagctatggttttgttagagtgaccgcagcaaaa
ccacgtgtaaagtttctcaggaatgagtcatctttctttctatgggctgatgatccatgg
ataagaataaacgtgtctcttgtcacgcccaacacgtgtccgccagaccaagcatacgta
aacatcacatcacagtatacagtgtattggttttgctggagatatcctgagtctatgcgt
ttctataaggagggagatcttgataccatccctgtagtggatcaaataccaagaccagaa
aaggacaatgggggctgttttggtagaggtcctggcagaatgaatgtcaccaaggattgg
tatctgttggacccctcaaggatagtgcccagaggggagtctatatatataggcgctcga
gtggtcatggggaatgtcatagttgattactcatacgacacctatcaaattgatgaaccg
ctagagaagagcaatataagcatatcaacaccagaagcaaagctgtcagcaacgtcaaca
atgacactcccattatcatcaacaacactcttatcttcacccttatcatcatcttcttta
ttaatcacatcacttttatcgtcgttatcatcattatcacagtctccatctttgttggca
ccactattatcatcaacttcaacctctacgttgccatcgttacccatcaaaacaatcaca
acttttacacggtctgctgacacatctcttaatgtcaccttcctgacgcctacgagtgct
tttgcaatttccaccacagtaactagaaatgcaaacagtcgttgttctgtacccacggcg
cgaatctcgtccctgggcaggtccctcttgaacccactcactgttccacgttccaaatcc
cataccattaagggagaagtcgatctaaactgtgactccatcaatggaacacgattccta
tggacagtgcgcgcagtcaacatatccggtgacatcacaagtgatgagcagatagtgggt
gtcaacagcgcacagtggaccatcagcaagcattcacttgcgtacggaatgtacattgtg
cagttcacggtccatacatcaggagagcgtgactacaccgctatagactatgggatcctt
aacatcgtacagtcccctctcgtagccgttgtgctcggcggagatttcgttgttcgaggt
cgagatcagatgataaatttggatgcgtcaaattcttatgacccggatgttggacgtgag
ttgtatgatgagatgtctttcacgtggttgtgtcgtgttcaaggcgaactctggccgcag
tcggatctgacatctctgccttatgtgacccaggcttccgcatcaggggctggatgtttt
gggactggtatagggcggctgagagggttgccgaataacccaaggcggttggttatcgaa
aaaggtctgttgcaggagaatcgaaactacgagttcgtaattgttgtgagaaaaggaaat
cgtgagagtcttggccagcaagttgtctccatcatacttggagatccattggtgacatat
ttgagatgcaagtttaactgcggtggcaaagtgaatccttcctctaaattaagcctggac
gttttgtgtgatggcggaatttgcacagccgatacttcctattcttggtcgctatctgtc
cagtctggcaccgactcttccggacagctgacatttcaaccaatcactgattcgctagag
cagctgacgtcaactgcactgactgcccctagcatcgttatcaacccattttctttgact
ggtggagtaacgtatcgttctgaagtaatagtcacgtcaccaggtcgagcagcgagctct
aatcaatatttgttcacgacaaatcagcctccttccgaagggtcgtgccacatcagtccg
actacaggattggctatgattacgtcgtttaacatgagttgtacgggatggcaagacaat
gaaaccccccttgaataccaattcagataccggaagtcggatggtacatacgcattgatt
tattacggagacaaaatggagacatccgctgtacttccggccggccgcgaagagaatgac
tttaattttgatatcgaggctaccgtgtctgattctatgggggctgcaaatcaaaccacc
cttctcgttcaggtaaccccacaacagctatcacccaataacaatatcttaactaccacg
ctcgagaggctgacggtgggccgccacagcagcttgggaaccctgttgcagtccggtgag
gttggtggcgccacacagcttgctaatgctgtgttgagtacactagatgatctggataac
tctacacaaaaccacaccgtcagcaaggaaagtaaaataacaataaaagaggaaattttt
ttgggtcttgccaacgtcaaagttgatagcataaagataatcacacagacgtctgcagtc
tttgccactggaacgaacaacaaagatgatttgtcacacacctcacaggaaataacactt
aagacgtttgactcctacgccgaggtcctggaaaaaaaatccaaagatgatgaccaggat
ccggaagagatggaaaaagcggcgaaaaaccttctacacgggacgggaaacatactagcg
gcggcttcagacgaagcgaaggtgtacggcacagaggcgagcaaaacaaccgacaaaacg
aaacaagagagtaaggaaagagctctccaagctgacaacctcattgcccgcctctcacgg
tcggtacttggtcgtaaagaggccggagagagtccgacagtctttaagtccctcaagatg
actgtgatgctgtcacgtgacctgcccgatcgcattggaggacaagtttttgacgaagga
ggttgcatgatagcattacctgcaaaccctttcagtcaaaactcggccagactgcagaca
gttgatactcagcttcgtgtgatacaattcaatccctacacttggggcggaatggcggca
cttatcacgtccaaggtcacaagtctttcattccaggaatcctccggcaaggcaatcagt
gtcgaaaaacttaaagatccaatcagaatgaccattccactttcccttccctacactatg
cctcccccgatcaggtcctttgtgaagcctagctcgccacaaaggcgaaaaatatatgta
caggtcgcggggtcctcctatacattaacggtacagataacctctgggcatgtttctcta
tttgtggatcgcagcagagatgtgtctaagtctaagaacttacacaaagcagttattcct
gacgataaccgctgcaaggggatgtccgggtgtgacccttactctgtggtgatccccggt
agtgtactcgcccagaaagggtactattactacatactgatgcatcacgccgaggagggg
gagcagcctgagtcatcccgtgtgaggagagactgcggaagtcacggtcgccagaagaga
tcttgcgttgacattaaagacccccctaccacccctccccctcagaacatcaccatagta
ccaaagtttgacgctaagactgatgtgaatgtatcactaagtgggagcatggcgagttgc
ttgtattggtccatggaaaagcaggaatggacaagtgaaggctgtcaggctgggaatgag
tccacaccacaggggattgcgtgcgtctgtaaccatttgacttcatttggtggtgatttc
ctggtcccgcctaatcccattgatttcgacgtcgtgatcttggccttcagtgatattgcc
gagtcaagaaattactccgtgatcgcgacagttggtaccgtactaatggtatacctgttt
gtggtcgtgctggctcggcgtgctgatcgcaaagacaggaaaaagacaggaccaaagatt
tcacttaatcagcgaggtagtgaccatgcctcatatgaagtcaccatagcaaccgacatt
tggatcaatagcggcactacggctgacgtagcactgatcgtatgcggcgaaaacgcaacc
agtgacgtcatagtcatacgtcatgctgattttccaaataggatactattcgcaagggga
aacaacgaccgattcattatacacgttcccaccccactcggtaaacttttgcgcgttaaa
atatggcatgacaacgagggaaatagtccggcctggttactaaggagcgtcactgtgcat
gccacaaatagcgaagaccgctatgtttttccttgtaaccgatggctcgccgttgacaag
gatgacggaatgcttgactgcacattgactccccattatggtctgtcagctttaaaaacc
tcctttgcggaaaaatctgctaacgatttcgctgatgaccatttgtgggtgtctgttgtt
gctaggagtccgtgtaatttcttcagtcgcgtgcaacgcgcaacatgttgcctgtccctc
tttacgtctgccatgattgctaacgccatgttttataacatcggcgggaaatctgagaaa
gtattccgtcttggtccaatggaatttggtcttaggcagatagtcatcggcgtccaaagt
ggactcattgttgctccaataaacctcttaattgcccaacttttcaaaattggcagtaac
tttcaagaaagctaccaggaaaaatacccaatccctggaaatagtagcaaggacttttca
tttgattacaagccactgaaaaagaaagctgaacggcctactgtggccttgtatgcagtt
tttacatttattggttattttctagcatttgcggtagtcataacatcaggagctttcaca
atattctacagcatgcagtggggaacagaaatcagcaaccagtggctgtcatctatgctt
gtctcgtttgtgcaagacctattcattctacaaccgatcaagatcgtggtgatcgcagtc
ttggtcactctgatatgccgtaaagcaacacgtaacaaggcagggcctgtgatagaaacc
gctcgcgtggagagaaacaggaattacgaaatcaatggtaacgacgtcatgtgtgggtca
ttgacagaaacggagaaggaggaagcacgccagagacgagtaatagaaaaatccgctacg
aaaaagataaagcagatgatcgtgtatgtgatattcatggtccttatgtctgtggtgtgt
tatggaaacagagcggatcatggcttttacatgacgcaggcgcttcaacagtcattccgt
aattttgacaagatttctaagaaaactgatttgatcacgtggctaaatggttctctattg
gctgggctctaccctgctccttggtataacggtctctccgagtccaacacggcatatatt
ggtgacaagtgctcaatattactagggctgtccagattgaaacaatcacgtgtacagaca
ggccactgtacaataccaaaagaagtacgcctccgattctccacatgctatgcatcatac
tcacacagtcgcgaggacactactcttgccaacctcccaggctggaaacccttcacgcca
tcaccactgacgtcactaaacacaacgtcagataacataaccacggcactaacaccagat
aattgccccaaaccttggaaataccatgaggcaagcagtttagccaccctcccctactgg
ggacagaaagcagtgtacggagggggaggatttgtggcgaatttgggatactccgaaagt
gtagcgcgtcgagtgattaatgaccttgctagggatggctggtttgacaggcagaccaga
gctgtgcttgcaatattctccgtgttcaacgccaacacagattacgtcagctttgttaac
tttctagcggaggctctaaccacaggaacaattcgaccgtcgcacaggataaccacgata
cctttatacccaacaagccttttgtacttggtattccagcttctgttccttctatatgtc
atgttatatttggtccttatttgcgtagaagtttacaaaaagaagttgccctatttcaag
gacatatggaactggttggagatgctgataatcttattcagcgtcgccacaacagctgtg
cagttcgtgaaagggatataccttaccgatatcgtcaccaaaattagaagcaatccttat
ggagacttcagctttgattatattgtgatgggaacagagttagaagagtcattgatggcc
tgtcttgtttttttctcgagcttaaagctgatgaagttagtcctgttgcacgttcgcgtg
gtcgtcatctcgtcaacaatgcgtgtgtcattcatacgcttgttgcctttctctttcatc
ttcatcgtgatcctactcgcttatgctcaactgggaatcctagtattcggtacaatggaa
acgtcctacgcaacggtctacaacgccttagtaaccgaactgatgctgtttattggagga
gatacaaggataaatgagctaagagaagtgaatagggtcatggctccgttttacgtcatc
tccttcatggttttcatggggttcattttaatgaacgtgtttgttgcgattcttaatgaa
gctcagtttcagcagaagacgtcgcttgatgagctctcgaatgacgtgaaggtgattgat
ttaattaatgacaagattcgcactgtactgcggctgccgcccaaacaaactagaaaggct
gaaacctttgtaacaaaaatgcaagcaaacagaagcaatcgacaaattagagacaataga
gacgataatgtggccaaagttgatatgggcttaggagccactgtccaatacaagtcatta
ccttgtaaggactctgagaatagccgccaaggacaagaagaggatagtcccctcggaaag
caattagaggatgcagatactagcttaagagttagagtgcagagtgattcaagagaaggt
ttaaatgatgatagtactatgcgtcgtaagcttgcccgcgcaacggcgcggatgattaag
aggcaggaactttataaacacatgaacatcattcacgacaagcttcgacgagcccaagtt
ctgctagatcttgtatcgcttgacgagacgagcgtatatatgaagtttacagagatgttg
cttaaggtagagagtgttcgtgggttgtccgagagttcgcccaccgtcccggacagtgag
acagatgatgacctctttccggaaaaaggggaactgtttcaacgtcgttcgagcaccgtg
gaattccccgatttggtagaaaggcgcacgagcacgttgaccctctcggatatgtggctt
ggcgcgagtttgcataacgaaaacgagatcaaatctgtgtttccgcgcccaaagccggtc
atcggtaatgctaacaagcagtttaggccggttgtcataggaacgcaatcagctgtccag
ttatcgcacttggctaaggggtcggaccgtttcacccaacaaatcacaacgtcaagctcg
aaagttgggacccctgtgcctagaggaattaatttctcattgccgaagaaaacgtactca
tggtcaccgaagaagaagtga
DBGET
integrated database retrieval system
