Nematostella vectensis (starlet sea anemone): 5510729
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Entry
5510729 CDS
T01037
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1 isoform X1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
nve
Nematostella vectensis (starlet sea anemone)
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nve04040
]
5510729
Ion channels [BR:
nve04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
5510729
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ion_trans
Per1
Motif
Other DBs
NCBI-GeneID:
5510729
NCBI-ProteinID:
XP_032235774
LinkDB
All DBs
Position
Unknown
AA seq
1126 aa
AA seq
DB search
MVENQAFLLSDFESDTVSLESAAGSKRLPPRACSNRVRKKCNTIQQAIAETVEKNFCRRM
TLGQACRDGRKDCVRKLLRGNLTNLNTLDADGFSPLHYATTTNHVDIVQMLLDAGADVDV
RGSPSIQRIPPIICAAKFNAIESCRVLLRAGADVNITNCYGQTALHHATRRGHSKMVELL
LRDGQMDVNVVDRDNTTSLHVAAMIGSNPIIKTLLFCGANITAKDNDGFTAFHLAAREGE
EEVLQTLLRTGVTLKDTVYLDDTDNYGNTCLHLAVKHGRYSCVKTCMDAGASWSVWNSSL
QTPLHLAAIAGNLCIVKLLILKGAKYDCEDGDGMTAILRASLEGHVDIVEHLLDQGAPLM
CPDGKLTPTPLLCAVERCHHKTIEFLFSRGAPTDYQDMHWRTCLHVAAACSDFRTVEIIL
RNGGKSIINSKDSYGKTPLHYAVIRCQGGKIIQLLIESGANVLAVDFDERLPLHHAAEQG
MLDNISILLQANPETINEVDNRSLTALHIAAAAARTEACRLLLEKGAEVDYRDDERLTPL
FYVASVGCPLTVKVLLEYDADLEARDKNRKTPLISAAYFGRLEVFRTLLDSGADIAAETS
SGWNALDVALDNNNLDITNEIIRHESWKTLLLNTKADGVSPLKKLIERVPCLAKVVLDKC
IEHSTWVDTDKEYSVTYDFQLLSPPPDREKDKNGQRYFGPMEMLLHGREDLLRHPLTKKL
MATKWRNVGVNFFYLGAFIYSLFLVDFSHFMFCVTGFNDKLRRNETEKSHMCSESMLYYQ
AITLAIFAIVNLLYEAYQLYTERLSYFEMANGFQVSTFVCTLIMLFPLEKNKFLVTELSW
SAGMIGLLLAYLTFLLYLQTLFSTGIYVTMLFEVLKSLLKVLAMFSVLILGFALIFVLLM
NGAEPFNLFLPSIFKVVVMTIGEIEYSRYFVDEVSLWSSRTKHLEHRELIAQCIFVCFCL
LMPIALMNLLIGLAVGDIESVQEHAEMKMMATEIETVFEFEEKIPLVIRRRFYKPSMTIF
PNKPRRFTRWVQKYFGCFGSRLNRRKKIGIKRDMTVNESPSDSLTNMQFTLADHGHRIDV
ISTELRAHRELLESIAAALHRTPSEPTNERNVRRQEGSEENILMKL
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atggttgaaaaccaggcatttctgttgtcggattttgagagtgataccgtaagtctagag
tcggcggctggaagcaagagattaccgccacgggcttgttcaaatagagtacgaaaaaag
tgcaacacaattcagcaagccatcgcagagaccgtagagaaaaacttttgccggcggatg
acactcggccaggcatgtcgtgacggaaggaaagactgcgtgcgaaaactccttcgcggg
aaccttactaacctaaacacactagacgctgacggcttttctcctctgcactatgcgacc
actactaaccatgtggacattgtacaaatgctattggatgccggggctgacgttgatgtt
cgcggttcaccgagcatccagcggattcctcccataatatgcgcagcaaagtttaacgca
atcgagtcctgtcgcgtgctgctccgcgcaggcgcagacgttaacatcaccaactgctat
gggcagacagcgttacatcacgcaacacggcgcggccacagcaagatggtagagctgttg
ctgcgtgacggtcaaatggatgtgaacgtggttgacagggataacactacttctctgcac
gtggctgccatgatcggatctaaccctattattaagactctgttgttttgtggcgctaat
atcactgcaaaagacaatgacggcttcaccgcgtttcacttagcggccagagagggcgag
gaggaggtgctacagactttgctcagaacaggtgtcacactaaaggatacggtttatttg
gatgacaccgataactatggcaacacctgccttcacttggcagtcaaacatggccgctat
tcttgcgtcaagacctgtatggatgccggcgccagctggtctgtatggaactcctcgctc
cagacccctctccaccttgccgctattgcgggtaacctttgcattgtaaagctactaatc
ctaaagggggctaagtacgactgcgaagatggagacggaatgacagctatactgagagct
tccttagaaggtcacgtggacatagtggagcatctgctcgatcagggagctcctcttatg
tgccctgacggcaaactgacccccaccccactgctatgcgcagttgagcgatgtcaccac
aagaccatagagttccttttctctcgaggggcgcctacggactatcaggacatgcactgg
cgcacgtgtttgcatgtggcggcggcgtgctcggatttcaggacggtggagatcatcctt
aggaatggtggtaagagtatcatcaactccaaggacagctacgggaaaaccccgctacac
tacgcggtgatcagatgccaaggcggaaagattatacaacttctgatagaatccggcgct
aatgtcttagcggtagactttgatgagagacttccgcttcaccatgcggcagaacaaggg
atgctggataatatcagtattctattgcaagcaaatcccgagaccatcaatgaggtcgat
aatcgatcactcaccgctctgcacatcgccgcagctgcagcacgtactgaagcgtgtaga
cttctgcttgaaaaaggcgcagaggtcgattacagggatgatgagagattgacaccgttg
ttctacgtggcatccgttggatgtcccttaactgtaaaagtgctcttggagtatgatgcc
gacctggaggctcgagacaaaaacaggaagaccccactaatatcggcggcttacttcggt
cgcctggaggtgttccgtaccttactggactcaggggctgacatcgctgccgagacgtcg
agtggatggaacgcgttggacgttgcccttgacaacaacaacctcgacattaccaatgag
ataattagacacgagagttggaaaaccctgctgctcaataccaaggctgatggagtgagc
cctttaaaaaaactgatcgaacgagtcccgtgtcttgcaaaggttgttctggacaaatgc
atcgagcactcgacatgggtcgacacggacaaggaatattcggtgacgtacgattttcag
ctgttgtccccacctcctgatcgtgaaaaagacaaaaacggtcagcggtactttggccca
atggaaatgctgctacatggcagagaggatttactgagacatcctttgaccaagaaattg
atggcgacaaaatggcgtaacgtgggggtcaactttttctatcttggcgcgttcatctac
tcattatttctggtggatttttcgcatttcatgttctgtgtgaccggattcaacgacaaa
ttgcgaagaaacgaaacagaaaagagtcatatgtgtagtgaatcgatgctttactatcaa
gcaattacactcgcaatatttgccatcgtcaatttgttgtatgaggcctaccagttatac
acagagcgcctctcgtattttgagatggccaatgggtttcaagtgtctacttttgtctgc
actcttataatgctgttccctctcgagaaaaacaaattcttggtgactgagctgagctgg
agcgcgggcatgatcgggctgctgctagcttatcttacatttctactttacctacaaact
ttattttccacaggtatctatgtcacaatgctattcgaggttctaaaatctcttcttaag
gtcctcgccatgttttctgtgctcattcttggtttcgcccttattttcgtacttctgatg
aatggcgcggaaccattcaaccttttcctcccctcaatcttcaaagtggttgtcatgaca
atcggagagattgaatactcgcggtatttcgtggacgaagtttcgctatggagcagtcgc
actaaacacctggagcaccgggaactgatcgcacagtgtatttttgtctgcttttgtttg
ctgatgccaattgcactgatgaacctactgattggccttgctgttggagacatagagtct
gtgcaggaacatgcagagatgaagatgatggcgactgagatcgagacggtttttgagttt
gaagaaaagattcctttggtgatacgaaggcgattttacaagccttcgatgacgatcttc
cctaacaaaccacgacgcttcaccagatgggtgcagaaatactttggttgtttcgggagc
aggttaaacaggcgtaagaagatcggaataaagcgagacatgacagtgaatgagtcacca
tcggacagtctaacgaacatgcaatttacattagcggatcatggccacagaatcgatgtt
atcagcacagagctgcgcgcgcatagagagctactcgagagtattgccgctgctctacac
cgcacacccagtgagccaacaaatgagaggaacgttcggcggcaagaaggctcggaagaa
aacattctcatgaagctatga
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