Nematostella vectensis (starlet sea anemone): 5510940
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Entry
5510940 CDS
T01037
Name
(RefSeq) FACT complex subunit SSRP1 isoform X1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
nve
Nematostella vectensis (starlet sea anemone)
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nve03000
]
5510940
03036 Chromosome and associated proteins [BR:
nve03036
]
5510940
Transcription factors [BR:
nve03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
5510940
Chromosome and associated proteins [BR:
nve03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
5510940
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
POB3_N
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
5510940
NCBI-ProteinID:
XP_032236022
LinkDB
All DBs
Position
Unknown
AA seq
740 aa
AA seq
DB search
MASEGLEYNEVSLLVRGALNSGRLKLHKSGAVFKASKTGRVDQFSKDDIESAHWLRVACG
QELKIVLKSGLQFRFDGFKESDFANLSEFLKSFFGVKLEEMELSVKGWNWGTATFNGSAL
AFEVDKKPAFEIPLKDVSQATTAGNNEVTLEFHQHDDAEVALMEMRFYIPTPADSTDPNP
VTTFHEHVLSKADIIQITGDAIVTIPDVACLTPRGRYTMKIFPTFVQLHGKTYDYKIPYT
TILRIFLLPHKDHMFFVVSMDPPIKQGQTRYPFLITRFDKDEHFDVKLNISKEEMKEKYD
GKIEKEMSGAIYEIISRLMKAVVGKKITVPGTFKSHQGVSCITCSHRAGSGLLYPLERGF
IFIHKPPVHVRFDEISAVNFARVAGAGGHSRSFDFELQTKNGTTIVFSSIEREEYGRLFD
FVRDKKLRIKNTGKATTKSTKEKNIDDDLMGSDDDEHDAYLETVKAEAAARDEDDDESED
EDSDDESFAPEGSGDDQDVREEFESEPSSSEASGSDSEGESKKKKKEKPEKKRKAEKPPK
SPKKKAKTASFVETGEKGKKGGKKKKDPNAPKRAMSAYMLWLNDTRQEIKDKNPGISVTE
VSKVAGEMWKNLTDKSKWEEKAAIEKQKYVQRMKEYNENKKNDKEESSPKKKSPSKKASK
APKEEKSSSPRKSLDNNQKFKSAEFVESSGDSSDSEAEKKKGKGKKSASKSKKKKEESSE
DESMEEESEEEMSEGVSDSD
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcttcggagggtttggagtataacgaagtgtcactgctggttcgcggtgctttgaat
tcaggcagactaaagctacataaaagtggagctgtgttcaaggccagtaagactggtcgt
gttgaccagttcagtaaagacgacattgagtcagctcactggttgagagtagcatgcggg
caggagctaaagattgtcttgaagagtggacttcagtttagatttgatggtttcaaagag
agtgattttgctaatttatcagagtttctaaaatcattttttggagtcaagttagaggag
atggaactatcagtcaagggttggaactggggtactgccactttcaatggctcagcactt
gcgtttgaagtggataaaaagccagcgtttgaaatcccactgaaagatgtatctcaagct
acaacagcaggtaacaatgaagtgacgttagagttccatcagcatgatgatgcagaggtg
gcgctcatggagatgaggttttatatccctactccggccgacagcaccgaccctaacccc
gtcacgaccttccatgaacatgtcctttcaaaggcagatattatacagatcactggggac
gcaattgttacaatacctgatgtcgcctgtctcacaccaaggggtcgctacacaatgaaa
atatttccgacatttgtacagcttcatggaaaaacatatgactacaaaattccctatact
acaatactacggatattcttgctgcctcacaaggatcacatgttctttgtggtcagtatg
gaccctcccatcaaacaaggacagactcggtacccattccttatcacacgctttgacaaa
gatgagcatttcgatgtgaaactcaacatctcaaaagaggagatgaaggagaaatatgat
gggaagattgagaaggagatgagtggagctatttatgagatcatcagtagactgatgaag
gctgttgttggcaagaaaatcactgtgcctggtacattcaaaagtcaccagggcgtcagc
tgtatcacatgttctcaccgggctggcagtggactgctatatcctctggagaggggtttt
atcttcatccacaagcctccagtccacgtcagatttgatgagatttctgctgtcaacttt
gcccgtgtggcaggtgctggaggtcacagtcgttcctttgactttgagctgcagacaaag
aatgggactactattgtgttcagtagtattgaaagggaagaatatgggagactatttgac
tttgtacgagacaagaagctacgtatcaagaacactggaaaggcaacaacaaagagtact
aaggaaaaaaatattgatgatgatttgatgggatcagatgatgatgagcatgatgcttac
ctagagaccgtcaaagcagaggctgcagcaagggatgaagacgatgatgagtccgaagat
gaagattcagatgatgagtcgtttgcgcctgagggcagtggtgatgaccaagacgtcagg
gaagagttcgaaagtgaaccctcttcttctgaagcgtcgggatcagattcagagggagag
agtaaaaagaagaaaaaggagaaaccagaaaagaagcgaaaagcagaaaaaccaccaaag
tccccaaagaaaaaggcaaaaaccgcgagcttcgttgagacaggcgaaaaaggcaagaag
ggtggaaagaagaagaaagatcctaacgcgcccaagagagctatgagtgcctacatgctt
tggctaaatgatactcgtcaggagatcaaggacaagaacccgggaatatccgtgacagag
gtgtctaaagtggcgggcgagatgtggaagaatcttacagataaatcgaaatgggaagaa
aaggcagcgatcgaaaaacagaaatatgtacagaggatgaaagagtacaacgaaaacaag
aaaaatgacaaggaagagagcagtcccaagaagaaatctccatcgaaaaaagcttccaag
gctcccaaagaagagaagagctcatctccccgaaaaagcctggacaacaaccagaagttc
aaaagcgctgagtttgttgaatccagcggagattcgtcagattccgaggccgaaaagaag
aaggggaaaggcaaaaagtcagcgagtaaaagcaagaaaaagaaggaagagtcttcagaa
gacgagtctatggaggaggagtcagaagaagagatgagtgagggtgtgtccgattcagac
tga
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