Nematostella vectensis (starlet sea anemone): 5511111
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Entry
5511111 CDS
T01037
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
nve
Nematostella vectensis (starlet sea anemone)
Pathway
nve03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
5511111
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nve03021
]
5511111
Enzymes [BR:
nve01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
5511111
Transcription machinery [BR:
nve03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
5511111
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_1
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
5511111
NCBI-ProteinID:
XP_032236220
LinkDB
All DBs
Position
Unknown
AA seq
1764 aa
AA seq
DB search
MLSANAVPCHQLEGLKISLYSREEVRKLSVKRITNPETFDALLHPNHGGLYDPVLGPTDR
DDLCGTCGQNNFSCPGHFGHIELPLPVYHPLFFKMLLQVLRSSCFCCHRMLLSKSAKKLL
ASQMKVLDYGLISVAEELEEIVKNVLSNGATEKSGKDAMDENCVAALNKHVRTVLRELDK
SESRKKANSMNVTDFRHALLKKFSKTHLSTKRRYCSMCKAPSRDVRHEYNSRLYLKPLPN
REAQKWAATKVAHAHLTQLEERARKDKDEELLTGQMKKSNKSSGVNEVLDSQQEVAKSLK
QTYLTPKEVLEHLEEVWSKDGEFLNILLGGYPAPNARQRASSADMFFVEVLPVVPSRFRP
LSVLGEKRFENPQTATLAKVLKDIELVVENLKGLDKKHEDLPQIAEDEPEEQETMKKPRR
KGKNAPVTVAGTTPVKRLHNAWLKMQSDVNGVMDSDLDKLSAIKFPGIRQLLEKKEGLFR
KHMMGKRVDYAARSVISPDPYINTDEIGVPQVFAKKLTYPQPVTTWNVKELRQAVINGPL
VHPGAILVESEDGKKIRLSETDVNQRQAIAKRLLTPSGDNKGSHVNCKKVYRHIQNGDVM
LLNRQPTLHRPSIMAHKVRVLPSEKTIRLHYANCKAYNADFDGDEMNAHFPQNELARAEA
YTIASTNFNYLVPKDGTPLSGLIQDHMVSGVLMTIRGRMFNKLDYQQLVYGALNFKNQPI
ELLMPCILKPTQFWSGKQVISTILLNLIPLGSKRLNLKGKAKISAKNWNTRKPRRQFLDL
EVLKGDDMSESEVVIRDGHLLCGVLDKAHYGNTPYGLVHCCNELYGGVMSGELLSALARV
FTSFLQFHGFTLGVKDILVTERADKIRRKLIAKGRVSGKDAATSAFGMPEDCHRSDLEAR
MQRAHHNSDGTDMKELDLCMKKKTDHYQDSINKACLPLGLYQRFPGNNLQLMVQSGAKGS
AVNCMQISCLLGQIELEGRRPPIMLSGRSLPSFLPYDTSPRAGGFVDGRFLTGIRPQEYF
FHCMAGREGLVDTAVKTSRSGYLQRCLIKHLEGLQVAYDLTVRDSDGSIVQFYYGEDGLD
ILKTKFLSDKQYPFMVENYMAFLQQLNPKDLLGHLNPDKANKLESKIHKWQRKHPSVDKQ
NRTSAFLAFEADNLEEVQGKHDTVPEKFGRSKAQLELFKMWTEAPSSVKSRYSKLYSRCP
PPVLSKLRPDRSFGAVSEKISHTIANYIRTNPDKCLQDDGDQTSSKGVKASKFRSLMYLK
TLRSLVDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRMREILMTASANI
KTPTMDMPLLAGKKVIKRAKKLQQKLNRVMLSQVLRSIDVWESLSPKESGTRMRSYRIKM
KFLPKSVYEDEFYCSPAKILHYVETVFFKKLIAVVQKTVRAKQSQRLVDTADDNAPAPPP
AENNEEPDDDNDNAELSGDEGEDGAYDVKQRKRLEQHASYEAPDEDEMEIERELQNGLES
GDEDDTKADAQRSETNSPTLDVETQQTADNPAMTEKSKKKPKPSALEGSREDRVVSSDSH
IVSYRYDNEEEQWCEVVIKFPVLRWKVRVMSIAERLAKQSVVHETPGINRCFLVEEKTNS
VLKTEGVNLQVAFRYPNIINVDKLYTNDIHAVARTYGIEAAARAITKEVKNVFGGYGIHV
DPRHLTLVSDYMTYEGKIKAFNRIGIESSASPFQKMSFETTTHFLRGAVLSGDMESLKSP
SSRLVVGRVVGGGTGSFELLQPLC
NT seq
5295 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcagcaaatgcagtgccgtgtcaccaattggagggtcttaaaatttcactgtat
tctcgggaagaagttcgaaaactaagcgtaaaacgaatcacaaatccggagacgtttgat
gctttgctccatcctaaccatggcggcttgtacgatccagttttgggaccaacggacagg
gatgacttgtgtggaacttgtggacagaataacttcagctgccctggccattttggtcac
atcgaactgccattacccgtctatcacccgttgtttttcaagatgttactgcaagttctt
cgttcgtcttgtttttgctgccataggatgttattgagcaaatctgccaagaaattatta
gcaagtcaaatgaaggtccttgactatggtctgatctctgtagccgaggagttagaagaa
atagttaagaacgtcttatcaaatggtgctactgaaaaaagtggcaaagatgcaatggat
gagaactgtgttgcagccctgaacaagcatgtaaggaccgtcctgcgtgaattagacaaa
agtgagtcacggaagaaggcaaactctatgaatgtcacagactttcgccatgctttattg
aaaaaattcagcaaaacgcatctgtcaacaaagagacgttattgctccatgtgtaaagcg
ccatcaagggatgtccggcatgagtataacagtcggttgtacttaaagcctctacccaat
agggaggcacagaagtgggctgctaccaaggtggcacatgcccacctcacccagctagaa
gagcgtgccaggaaggacaaggatgaagagttgctgactggacagatgaaaaaaagtaac
aaaagctcaggagttaatgaagtgctggattcacaacaagaagtggccaagagtctgaaa
cagacctatttgacaccaaaagaagtccttgagcatcttgaagaggtttggtccaaggat
ggggagttcttgaacatcctgttaggaggctaccctgcccctaacgccaggcaaagggct
tcttccgctgatatgttctttgttgaagtcttgccagtcgtgccctccaggtttagacca
ctatctgtgctgggagagaagagatttgagaacccacaaactgctactctggccaaggtc
ttgaaggatattgagctggttgtggagaatcttaaaggcctagataagaaacatgaggac
cttcctcagattgcagaagatgaacccgaggaacaggaaacaatgaagaaaccaaggcgg
aaaggaaaaaatgcaccagtaactgtagctgggactacaccagtgaagaggcttcacaat
gcctggttaaaaatgcagagtgatgttaatggagtcatggatagcgaccttgacaagtta
tcagctataaagtttccaggcatccgacagttgcttgagaaaaaagaaggtttatttcgc
aaacacatgatggggaaacgtgtggactatgctgcaagatcagtcatatcccctgaccca
tacattaacacagatgaaattggtgtcccacaggtttttgctaagaaacttacatacccc
cagcctgtcaccacatggaacgtaaaggagcttcgtcaggctgtgatcaacgggccactc
gtccaccctggtgccattcttgttgaaagcgaggatggaaagaaaataagactcagtgag
acagatgtcaatcagaggcaagccatcgcaaagagactgctgaccccctctggggataac
aagggctcacatgtgaattgtaaaaaggtatatcggcatattcagaatggagatgtgatg
ttgctgaaccgtcagcctaccctgcacaggccaagcattatggcacataaggtccgagtt
ctaccaagtgagaagactatacgccttcactacgccaactgcaaggcctacaatgcagat
tttgatggtgatgagatgaatgcccactttccacagaatgagctagcaagagcagaagct
tacacgatagccagtacaaacttcaattacctggttcccaaagatggcacccccctcagt
ggactgattcaggaccacatggtatctggtgttctcatgacaatcagggggaggatgttc
aacaaacttgattaccaacaactagtctatggggctctgaacttcaagaaccagcctatt
gaattattgatgccatgcatactcaagccaacacaattctggtctggaaaacaggttatc
tccaccattttgttgaacctcattccattgggaagtaaacgacttaaccttaaaggaaaa
gccaagatttctgccaagaactggaacacacgaaaacccagaaggcagttccttgacttg
gaagtcttaaaaggagatgacatgtcagagtctgaggttgttattcgtgatggccacttg
ttgtgtggtgttctcgacaaagctcactatgggaacacaccctacggattggttcattgc
tgtaatgagctctatggtggtgtgatgtcgggtgaactattgtctgcactagcgagggta
ttcacctcgtttctccaattccacggctttacacttggcgtcaaggacatcctggttacg
gagagagctgataagatccggcgcaagcttatagccaaagggcgtgtctccggcaaagat
gccgctacctctgcgtttggaatgcctgaagactgccacaggtcagacctggaggcccgc
atgcagagggctcaccacaacagcgatgggacagacatgaaggagctcgacttgtgcatg
aagaagaagacggaccattaccaagactcgatcaacaaggcatgtcttcctctgggactt
taccagagatttccaggtaacaacctacagctgatggtacagtctggcgctaaggggtca
gcagtcaactgtatgcagatctcgtgtttacttggtcagattgagcttgaggggcgaaga
cctcccatcatgctcagtggccgttcactgccgtcattcttgccctacgacaccagcccc
agagccggaggctttgtggatgggcgcttcctgacaggaatccggccacaggagtacttt
ttccattgtatggctggaagagagggcctggttgatactgctgtcaagaccagtcgcagt
ggctaccttcagcgctgcctgatcaaacacctggaaggactccaggtcgcttatgatctg
accgttagagacagcgatggctcaattgtgcagttttactatggggaagacggcctcgat
atacttaagacaaagttcctgtcggacaagcagtacccatttatggttgagaactacatg
gcatttctgcaacagctgaaccctaaggatcttctgggacatctgaacccggataaagct
aacaagctagaatctaagatccacaaatggcagaggaagcatccatcggttgataaacag
aaccggacctcagcgttcctcgcgttcgaggcggacaacttggaggaagtgcagggcaaa
cacgacacggtacctgaaaagttcggccgatcaaaggcccaactcgagctgttcaagatg
tggactgaggcaccatcgtcagtcaaatccagatatagcaagttgtatagtcgttgccca
ccacctgtcctgtccaaactccgtccggaccggtcatttggggcagtgtccgagaaaata
tctcataccatcgccaattatatcaggacaaatccagacaaatgtcttcaggacgacgga
gatcaaacaagcagcaagggtgttaaggcaagcaagttccgaagtctgatgtacctgaag
acacttcgctccctggtagaccctggagaggctgtggggctccttgctgctcagtccatc
ggggagccttctactcagatgacgctcaacaccttccatttcgctggtcgtggggagatg
aacgttacgctggggatacctcggatgagggaaatcctgatgaccgccagtgccaacatc
aagactcccactatggacatgcctctacttgccggaaagaaggtcatcaagagagctaag
aagctgcagcagaaactgaaccgcgtcatgttatcacaggtcctccgatcgatcgatgtt
tgggaatctctttctccgaaagaatcagggactcgaatgcgcagctatcgaataaagatg
aagttccttccaaagtctgtgtatgaggacgagttttactgttcaccggcgaagatcctg
cactatgtcgagacagtgttcttcaaaaagctgatcgccgtcgtgcagaagacagtgcgg
gcgaagcagagccagaggttggttgatacagcagatgataacgcgccagccccacctccc
gcggaaaacaacgaggaaccagatgacgacaatgataacgcagagttgtctggcgacgag
ggagaagatggcgcgtacgatgtcaagcagagaaagagattggaacagcatgcatcgtac
gaggcaccagatgaggatgagatggagatcgagagagaactacaaaacggactggagagt
ggtgacgaggatgacacaaaagccgacgcacaaagaagtgaaaccaactccccgacttta
gatgttgaaactcaacagactgccgataatcccgctatgacagagaagtcgaagaagaaa
cccaaaccaagcgcgctggaaggcagcagagaggaccgagtcgtcagcagtgattctcac
atcgtgtcttatcggtatgacaacgaggaggagcagtggtgcgaggtcgtcatcaagttc
ccagtgttaaggtggaaagtacgagtgatgagcatcgccgagcggctagccaagcagagc
gtcgttcacgagacaccagggataaatagatgcttccttgtcgaggagaagacgaactct
gtgctgaagacggagggtgtcaacctacaagttgcgttccgctaccctaacatcattaat
gtagacaagctttacacgaatgatatccatgccgtcgcgcgcacttacgggatcgaggcc
gccgcgcgcgccataacaaaggaggtgaagaatgtgttcggagggtacggtatccacgtg
gacccacgtcaccttaccctcgtctcagactacatgacttacgaggggaaaatcaaagcc
ttcaaccgcataggcatcgagtcaagcgcctcgcctttccagaagatgagcttcgagacc
accacgcacttcctccgcggagcggtgctttcaggggacatggagagtctaaagtctccc
tcctcgcgactcgtggtcggacgggtagtcggcggaggaacgggtagtttcgagttatta
cagcccctgtgttga
DBGET
integrated database retrieval system
