Nematostella vectensis (starlet sea anemone): 5511599
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Entry
5511599 CDS
T01037
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
nve
Nematostella vectensis (starlet sea anemone)
Pathway
nve03013
Nucleocytoplasmic transport
nve03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
5511599
09122 Translation
03013 Nucleocytoplasmic transport
5511599
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nve03019
]
5511599
03041 Spliceosome [BR:
nve03041
]
5511599
Messenger RNA biogenesis [BR:
nve03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
5511599
Spliceosome [BR:
nve03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
5511599
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Cortex-I_coil
CSG2
Motif
Other DBs
NCBI-GeneID:
5511599
NCBI-ProteinID:
XP_001631943
UniProt:
A7S8S8
LinkDB
All DBs
Position
Unknown
AA seq
680 aa
AA seq
DB search
MKRRKTRTGSEAGTSPQDKKHKSPSGIVRSAPMSAAEVDDFEAAKGTASSNSSSYRKACE
EMKRLFEEINDLKREGNDPNCPEITERRIRATLLFIILKKLNRVAHISGKKARDNTHEAK
QKVDGLHLQLQNLLYEAMHLKKEITKCLEFKSKDEEVELVTEEEFYSQAPKEVSKPEITK
DDPHQRMLARLDWELEQRKSFASKKKEFEKKKELLEKEINTRREFLNSLQPRLEEILKST
VPVQEYLNLPLDAKRAQHETARYLSQPLYVLYVQATAYNEACDPHLSVQIQGDVEAAKAA
LEEKPTQPEPESDSDDEATEHQRKSKRRRKKEESRKEEKRKALLKTHPLQIVLKLNCKGK
CTISLLVSYLPLLQIVTVNPSLSISEAVDQPILSNSTILAPESILTCLFPGDHGNTSPNA
TNQFQLTKDGIDSFSAFVGETGQPFLWAQRICGLEFLPDCQNAVVAESDVSRSHMEVTIK
AIRARVLARLALQRQLSSLEKLQVPASDAPQKLFPDKIASVLVSWSPVDYANFIEMPQAK
SLVDENLLDESDMYFCAEIECNKVRLKAGVVLYREYPVRPPIICLSISGGTAPFSSHVTR
MLEAEVNVHYKDLIDGDSPVNLLTNQIRRLQVCFDVFLECGVVEGIESIERAKLLVRKKR
GRDHNLPFLYDVSHDMFTHR
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgacgcaaaactcgcacgggctctgaagctgggacttctcctcaggacaagaag
cacaaatcgccatccggcatcgtacgatctgcaccaatgtctgctgcagaggtggatgac
tttgaagcagccaaaggaactgcatctagtaactcgagctcatacagaaaggcgtgtgag
gagatgaagagactgtttgaagaaatcaacgacttgaaacgcgaaggcaatgatccaaac
tgcccagagatcacagaacggaggattagagccactttgctgtttattattctaaaaaag
ctcaatcgagtggctcacattagtgggaaaaaagctagagacaacacccatgaggcaaag
caaaaagtggatggacttcatttacaactgcagaaccttctttatgaggctatgcaccta
aagaaagaaataacaaaatgtctggaattcaagtctaaagatgaagaggttgagttagtt
actgaagaggagttttattctcaagctcctaaagaagtttctaagcctgagataacgaag
gatgacccccatcagaggatgcttgctaggctcgattgggagttagagcagagaaaaagt
tttgcaagcaagaaaaaagagtttgagaaaaagaaagaacttcttgagaaagagattaac
acaagaagagaatttcttaacagccttcagccacggctagaagagatcctaaagtcgact
gtcccagttcaagaatacctgaacctgcccctagatgcaaagagggcccagcatgagacc
gccagatacttatcccagccgctgtatgtgttgtatgtacaagcaacagcatacaacgag
gcctgtgaccctcatctcagtgttcagatacagggtgacgtagaggccgccaaagcagcg
ttagaggaaaagcctacacaacctgagccagaaagtgactcagatgatgaggcaacagaa
caccagagaaaatccaagagaagaagaaagaaagaggagagtcgcaaagaggaaaaaaga
aaagcattactcaagacccaccccctacagattgttctgaagctcaattgcaaaggtaaa
tgtacaattagtctgctagtgtcctacctacccttactccagattgtcactgtgaaccca
tctctatccatctctgaggctgttgatcaacctatcttatcaaacagtactattcttgca
cctgagtcaatactgacttgtctgtttcccggtgaccatggcaacacatcccctaatgcc
acgaatcagttccagctgactaaggatggcattgacagcttctcagcctttgtgggtgag
actggacagccattcctttgggctcaaagaatatgtggactagagtttcttccagactgc
caaaatgcggtggtagctgagtcagacgtcagtagatcacatatggaggtcacaatcaag
gcgatacgtgccagggtcctagctaggctggctctacagagacaactttcatctcttgaa
aaattgcaggtccctgccagtgatgcgccacaaaagctgttcccagataaaattgcttca
gtccttgtgtcctggagccctgtggattatgcaaactttattgaaatgccacaagccaag
tcacttgttgatgaaaaccttctagatgagtctgatatgtatttctgtgctgaaattgaa
tgcaataaagtacgccttaaagccggagtggttctctaccgggaatatccagtcaggccg
ccaatcatatgcttgtcaatctcaggagggactgcacctttctccagtcatgtcaccagg
atgcttgaagctgaggtcaatgtgcattacaaagacttgattgacggcgactcacctgtc
aacttattaaccaatcaaattcgacgactgcaggtgtgctttgatgtgtttctggagtgt
ggtgtagttgaaggaattgagtcaatcgagcgtgccaagctccttgtaaggaagaaaagg
ggtcgtgaccacaacttgcccttcctttatgacgtttcgcacgacatgttcacacaccga
tag
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