Nematostella vectensis (starlet sea anemone): 5511634
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Entry
5511634 CDS
T01037
Name
(RefSeq) ATP-dependent RNA helicase me31b
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
nve
Nematostella vectensis (starlet sea anemone)
Pathway
nve03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
5511634
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nve03019
]
5511634
03036 Chromosome and associated proteins [BR:
nve03036
]
5511634
Enzymes [BR:
nve01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
5511634
Messenger RNA biogenesis [BR:
nve03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
5511634
mRNA degradation factors
5'-3' decay
Decapping complex
5511634
Chromosome and associated proteins [BR:
nve03036
]
Eukaryotic type
Gene silencing
piRNA pathway
5511634
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
5511634
NCBI-ProteinID:
XP_001632003
UniProt:
A7S8H2
LinkDB
All DBs
Position
Unknown
AA seq
432 aa
AA seq
DB search
MAAAKTEAAVSVANSNLENSESWKANLKLPPKDNRFKTSDVTATKGNEFEDYCLKRELLM
GIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGKTAAYLVPLLERTDTTKNCIQALV
LVPTRELALQTSQICIELGKHMGAQVMVTTGGTSLKDDILRLYNKVHVIVATPGRVLDLM
KKKLADMSKCQMLVMDEADKLLSMDFKKMLEQIIKHLPENRQILLFSATFPISVRDFKEK
HLRKPYEINLMDELTLHGVTQYYAFVEEKQKVHCLNTLFQKLQINQSIIFCNSVQRVELL
ARKILELGFSCFYIHARMSQSHRNRVFHDFRQGHCRNLVCSDLFTRGIDIQSVNVVINFD
FPKNSETYLHRIGRSGRFGHLGVAINLITYDDRFDLYKIENELDTEIKPIPSVIDKKVYV
AEFQQQQPDDEE
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggccgctgccaaaacggaagcagccgtttcggttgcaaattcaaaccttgaaaactct
gaaagctggaaagcaaatctcaaactaccacctaaagataaccgatttaaaacaagcgat
gtcactgcaaccaagggcaatgaatttgaagactactgcctcaagcgtgagcttttgatg
ggtatatttgagaagggttttgataagccatcgcccatccaagaagagagcatccctgtt
gccctagctggaagggatattcttgctcgagctaaaaatggcacagggaagacagcggct
tacctagtccctctccttgaaagaactgacactacaaagaactgcattcaagctcttgtt
ctagtgcccacacgagaattagccctacagacttcccagatctgcattgagcttggtaaa
cacatgggcgcacaggtcatggtcacaacaggagggactagtttgaaggatgacattcta
agattatacaacaaagtgcacgtcattgtggccacacctgggcgggtgcttgatctaatg
aagaagaagctggcagacatgagcaaatgtcaaatgctggtgatggacgaggctgacaaa
ctgttgtctatggacttcaaaaagatgcttgagcagattattaagcatttgccagaaaac
agacagatcctgctattttcagccacattccctatctctgtgcgggacttcaaggagaaa
cacttgcgcaagccatatgagatcaacctcatggacgaactaactctgcatggagtcaca
cagtattatgcatttgtggaggaaaaacagaaagtgcactgtcttaacacattattccaa
aagctccagataaaccagtccatcatcttctgtaactcagtgcagcgcgtggaacttctt
gccaggaaaatattagagcttggcttctcttgtttctacattcacgcccgcatgtctcag
tcccacaggaacagggtgttccatgactttagacagggtcactgtcgcaacttggtctgc
tcagatctctttacccgtggtattgatatacagtctgtcaatgttgtgatcaacttcgac
ttcccgaaaaactcagagacatacttgcacaggattggtcggtctggtcgatttggtcac
ctgggtgtggccattaaccttatcacttacgatgaccgctttgatctgtacaagattgag
aatgaactagatacagagatcaagccaatcccatctgtgattgacaagaaggtatatgtt
gcagaattccaacaacagcagccagacgatgaggagtaa
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