Nematostella vectensis (starlet sea anemone): 5512184
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Entry
5512184 CDS
T01037
Name
(RefSeq) protocadherin Fat 4
KO
K16507
protocadherin-16/23
Organism
nve
Nematostella vectensis (starlet sea anemone)
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nve04515
]
5512184
Cell adhesion molecules [BR:
nve04515
]
Cadherins
Cadherin related
5512184
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_pro
CADH_Y-type_LIR
CssAB
Motif
Other DBs
NCBI-GeneID:
5512184
NCBI-ProteinID:
XP_032237429
LinkDB
All DBs
Position
Unknown
AA seq
3337 aa
AA seq
DB search
MARIWRFGLATRNIKDQLWMRFVLVLYIHALGFHASSATSEVRTFYIPEGSPTGTEVGRI
PVRVQSILLASGIPADLEYNAGVITTKTVLDREKVSAYNLTIVEFSTPPKSYTVLVYVQD
LNDNSPSFVRGTSAKLVVFENDKDFRQKLIAVDSDFGSNSTQSYTIVSGNVGNVFKLISK
RDTDGDLYADLVVNASSIGVDRERLDSYVLNISASDGGNPANHGFLRLSITVEDTNDNKP
EFSNVSYSGTIPENIDVGTSILQVSASDKDIGTNAEIQYSIETHSDPQAIFGIHPTTGVI
VNNVRLDYEAKRSYLIVVKAEDKGSSHQLSSSAIVRIEVLDVNDNNPVIHVSYTLGGSYQ
VTENATIGTQVARVSVSDADSGKNGEVNVTLEGGDGYFSMKFDVLNDESIIAVGQSLDRE
THDHFFLKAVCIDKGDPPRTTEKSFRINVGDVNDCAPKFDRHTYETRVWENATVNTLVAI
VNAVDQDFGSNSELVYTIANTTESRSYLHWFAIDPSSGMITTATDLDREQIPQVVLTVLV
HDRGSPPLSDNCSVIVNLTDSNDNDPYFNQSSYNASLFENSPSGSPVVQLLAQDPDIGEN
SLILYSILTPNTPFFLDPRKGLVTNSRTLDHEVQSSYTFQVAATDGGGRSCNATVHVSLT
DLNDNQPVFDPSSYSVEYFENTRIGQSICQLKAIDRDSPKFAITRFIIEQGNADEVFSVD
GSGLITLAKLLDRETQDNYLLTVKAVDGGGQDSVNKAIVNITVLDVNDEPPIFSKAEYNF
TIQEHSQALSVIGHVHAISRDKGTNAEVVYSISKGNTDNIVLINSTGTLYLQSEVDHEKI
PSLYLTVQAKDKGTPPLFGYANVTIAVIDINDNSPQFNSSSILVRLPEDTPIGHTFYTVS
VFDADSGVLGRVSFSLLSNPGTLFNLDSNTGALSLTKLIDYGNSARSYTLPVQAQDGGSP
PRSSTAMLELKVVDVNDYSPVFGNWSYTAHVLETTPPDSNIIEVVATDVDSGENGRISYA
FDSKVDTSKFGLRNGGKIFIKSKLDREDIEEYNLKVIAIDHGTPRRSSSADVKVIVDDVN
DNNPHFQQASYAFFVKENEPVATYLGAVSASDSDEGSNGHVTYRFDTQVAQFIVDKQTGK
ITTSQVLDREAKASYVFSIVATDGGSSPRVDKTQVTVIVRDVNDCSPKFSKNKYSVTVNE
DLPVGSSLLTLIATDDDQQGPNSDITYMIVAGPKAFSLNQVTGVLTLVSPLDREVTHRHI
LHVVASDKGGNQSLETITYIEINVLDVNDNYPVFINETTFKTVPEKLPIGSVVAAVLAVD
SDQGDNGKVRYKIVNGNTDGTFKINETTGVISTLRALDFEVTNRYVLRVSATDMGKKQQK
TSYQLVTIYVEDANDNRPTFDKNPIITWIYENVPINTNVTTIKAHDDDSGLNSRIWYTID
SQSPRAHFKINSETGLIQTTHPIDREEISEYSLKVRATDQAFTEQDRLYNTATLKIIIQD
LNDNAPKFVSRNLTYVMEDEPFNFQVTSITALDPDTGQGGNVEYRIVSPDTGKFSLDLKT
GVLKLIGSLDYEDVPQYTLHISATDLGSPPLTSYQLFNVVVVDVNDNPPEFTRDLFIGTV
SENKPTGTSVVKVTAYDRDSGSNAELTYSIPSGVEMDKFSIDKHSGLIVTNSILDREKKD
TYFLTVHATGVSYPFRVSSTSVRINVMDRNDNPPKFISPVVTLKVPENSPARLIYTLTVQ
DLDYGNNTKVLYSIMSGNTDGAFTIGRSTGELSTTTKLDRETKASYQLSVQAKDITPPYY
TAFANITIFIEDQNDNPPVFQQSLYSSTISELTPPGTSILNLTASDKDSGSNGNIVYTLS
NDTYGVYSIDSRTGIVYSAARFETSIKQEYNFFCIAKDQGQDPKMAIVPVRIKIEDKNNH
APQFTKTPYEVHIFPNTSASALVTMVTATDADTDKSTNGKVTYRLDDSKNSTSLFVVESN
TGSVRTSAGFSNPPQGRHALYIIAEDHGSPPLRGYGIVQIVIGNIQDDPPRFLNQTPARV
SIPENSKVGSYITTVRARASSDAQVTYSIISGNKGRAFYVDPFTGVISVASADALDYEST
KNFRLHLVATPQGWVSLNGYMILDINVIDRNDNSPAFHPSNMLAQLAEDTGAFKPRFVVK
VTATDVDSGTNGKVTYSIWTGNEAGVFTIDSTTGEITTAKLLDRETTASFDLVIRGTDSG
IPPKSTNCQVKVVVTDLNDNPPLFDPLSEVNIREDTRTGAVVTSVVATDTDKESRLTYNL
KSASTPGMFSVGRFNGAVSLLKRLDYEKTNKYSLNIAVSDGLHSAEKTLTINVLDTNDNT
PKFLNSSYQVTLSKTIPAGRAILRVSATDQDSGSNAQIKYSFPITNSDQIDYKIDADTGV
ISARRTIDVRIRDSFIQIPVQAMDQGVPPQRALVYVRIIITREPKFELPSYFGKVPENAM
MGTSVLTVRVTDNAAGLPLGRISYNIENSNYFRIGQRSGVISVNKPLDYETKRRFLLVVS
AIDDTAPSKPVRVPVYINVSDVNDEKPVFGQSGYMAQWSEGIPVGTIVVNVSAADKDSGA
NGRVWFAIQSGDDKGSFAIDRKTGVIRTQRALDHETIKTHHVSVRATDEGSPPMHTDVSV
TIRVLDLNDNPPVFRVPGPNDVQVLENLPLNSRLYEINATDRDSGANARLSFTVIGGTGQ
GLFLIDKFSGWLTTNITFDYENTAVYQYSLTIKATDAGNPPLSSNITIIVNVADEDEYDP
SFNRMDYKFDVPGNAKIGDFVGQVTATDRDSGDQGRVFFVFYNPTSNALKMNATTGIISV
NRTLNDGSSLETRARRSLDELLIGFEIGSSRSRMRRSAESQELRYTIRAYSGKIGSERFA
DVPASVLVDFTCPGCMVPTTGAREGDPITGTALALIVGLAVLAGVILLAFVVVLLFIYSH
RKKRRTRQNPPLRFDGSFDEITVHPRTTGNANYVSAESISPRAFPAEYSPLSRNTDSNST
PSGTDASDTPGSSGSASSGRGSSEGDFDEQPVAIVNADIGSFHSDNNAKTIVADSGIQQD
DDDQISQLTLSDGSGILHVDTLNGSESKSDKTDKILARLEFQSVESMHVFGEEGGGEADG
GHDVGNLLYAKLAEADADDESIVDGPRSYIDEGHDHPSYGGSLSSIIGSQEELTGSYNWD
YLLDWGPQFQPLAEVFLEIGRMKDEGGDKKEVTRNGSIPSSSRLRPNLSGIATVDMLSSM
SSLPRSPVSPPSTQYSSPAFSPNFTPAITPLITRSPSVSPLDTGNVSPAYASRGVTPNGS
RPTSTHIVKLQNEDDAYSELSHSPSISDNESNAEIDV
NT seq
10014 nt
NT seq
+upstream
nt +downstream
nt
atggctagaatttggcgctttggactcgcaacaagaaacatcaaagaccaattatggatg
cgttttgtactcgtattgtatatccacgcgttgggatttcacgcaagttcggcaacaagt
gaggttaggacgttttatatcccagagggaagcccgaccggtactgaagttggtcgaata
ccggttagagttcaatccatcttacttgctagcggaataccggcagatttggaatataat
gcgggtgtaataaccacgaaaactgttctagaccgtgaaaaagttagtgcgtacaatctc
actattgttgaattttctacccctccaaaaagctacactgtgcttgtgtatgttcaagac
ttgaacgataactccccgagttttgtcagagggacaagcgcaaagttggtagtgtttgaa
aacgataaggattttcggcaaaagctaatagcagtcgattccgacttcggatcgaattct
acgcagagttacaccattgtgtctgggaacgttggtaatgtattcaagcttataagtaaa
agggacactgacggggatctttatgctgatttagtggtaaatgcaagcagtataggagtt
gatcgtgagcggctagattcatatgttttgaacatttctgcaagcgacggaggaaaccca
gccaaccacggcttccttcgactaagtatcactgttgaggatacaaatgataataagccg
gaattctcaaacgtgagttactctggtactatccctgagaatatcgatgtgggaacctcg
attttacaagtctctgcaagcgataaagacattggaactaacgctgaaatacagtactca
atcgaaacacattcagacccccaagcgatcttcggcattcacccaacgactggagtgatc
gtcaataatgttcgactggactatgaggccaaacgtagttatttgatcgttgtgaaagcg
gaggacaagggatcaagccatcaactttctagcagtgctatagtaaggatcgaagttctg
gatgtaaatgacaacaatcccgtaatccatgttagttacacattagggggaagctatcag
gttacggaaaacgccaccattggaactcaagtggctcgcgtttccgtatctgatgcggac
tcggggaaaaacggagaagtaaatgtgactcttgaaggcggagatgggtactttagtatg
aaatttgatgtactcaatgatgagtctatcattgcagttggacagagtttggatagagaa
acacatgatcattttttcctgaaagctgtttgtattgacaagggtgacccccctagaact
actgaaaaaagcttcaggattaatgtaggagatgtcaatgactgtgctcctaagtttgat
cggcatacttacgaaacacgagtttgggaaaatgccaccgtcaacacacttgtagcaata
gtgaatgcagttgatcaagactttgggtcaaactcagagttggtctacaccattgccaac
accacagagagcaggagttacttgcattggtttgcaatagacccctcaagtggaatgata
acaacagcaactgatctggatcgtgaacaaataccccaagttgtgttgacagtcctagtg
cacgacagaggatctccaccgctaagtgataactgcagtgtcatagtaaatctcactgat
agtaatgataatgacccgtacttcaaccagagcagttataatgcttcactgtttgagaat
tccccctccggctctccagttgttcagttgttagcccaagacccagatataggggagaac
agtttgatcctttattccattttgaccccaaacactccattttttcttgatcctcgcaag
ggcctagttaccaattctagaacacttgatcatgaggtgcagtcatcatacacatttcag
gttgctgctactgatggtggtggtcggagctgcaatgcaactgtgcatgtgtctctgact
gacctcaatgataaccaaccagtgtttgacccaagtagctacagtgtggagtattttgaa
aacacccgcattggtcaaagtatatgtcaacttaaagcaatagacagagacagtccaaag
tttgctattacaaggtttatcattgagcaagggaatgctgatgaagtgttctctgttgat
ggatctggcttgataacccttgccaagctcctggaccgtgagacccaggataactacctt
ctaacagtgaaagctgtagatgggggtggtcaagattcagtgaacaaagctattgtgaat
ataactgttctggatgtgaacgacgagcctccaatcttctcaaaggcagaatacaatttc
accattcaagagcactcacaagcactgtctgtcatcggacatgttcatgcgataagcaga
gataaaggcacaaatgctgaagttgtgtactcaatctcaaaaggcaacactgacaacatt
gtcttgataaatagcactggaacattatacctccagtcggaagttgatcacgagaaaatc
ccatccctgtatttgacggttcaagccaaggacaaaggtacccctcccttatttggatat
gcaaatgtgactatcgctgtcatagatataaatgataatagcccacagtttaacagcagc
tctatcttagttaggttaccagaggatactccaataggccatactttctatactgtctct
gtctttgatgctgatagtggtgtcttgggtagagtctctttctctcttctatcaaatcct
ggaactcttttcaatcttgactcaaacactggagctctatccttaactaaacttatagac
tatggaaattcagcaaggtcttatacattaccagttcaagctcaagatgggggcagtccc
cctagaagctccacagcaatgctggaacttaaggtggtagatgtgaatgactactcacca
gtattcgggaattggtcttacacagcccatgttctagagaccacacctcctgattcaaat
attattgaagtagtggcaacagacgtggatagtggagaaaatggcagaatctcttatgca
tttgattctaaagtggacacatctaaatttggtcttagaaatggaggaaagattttcata
aagtccaagttggacagagaagacatcgaggagtataatctaaaagttattgcaatagat
catggaacgccaagaaggtcatcttcagctgatgtaaaggttatagttgatgatgtcaat
gataacaaccctcacttccagcaggcttcatacgcattttttgttaaagaaaatgaacct
gttgctacctatttaggggcagtgtctgcaagtgacagtgacgagggaagtaatggccat
gtgacttacagatttgacacacaagttgcacaatttattgtagacaaacaaactggtaaa
ataacaacaagccaagttcttgacagagaagccaaggcgtcctacgtattcagtattgtt
gcaactgatggcgggagtagccctcgtgtagacaagactcaggttacggtgatagttagg
gatgttaatgattgctctcctaaattcagcaagaataaatactcagtaacagtcaatgaa
gatctcccagttggttcttcgctattgacattaatagccacagatgacgaccagcagggg
cccaacagtgatataacctacatgattgtcgctggccctaaggcattttctttgaatcaa
gtgacaggggttcttactcttgtctcaccgcttgaccgcgaagttactcatagacacatc
ctacatgtggttgcaagtgataaagggggaaatcagtcattggaaactatcacttatatt
gagatcaatgtcctggatgtgaatgacaattatccagtgtttattaacgagaccacattc
aagacagtaccagagaagttgccgattggaagtgttgtagctgctgtcttagctgttgac
agtgatcaaggtgataatggaaaagtacgttataaaatagtcaatggaaatactgatggc
acttttaaaatcaatgagacaactggtgttatttctacccttcgtgctttggactttgag
gtaactaatcgttatgtgttaagagtcagtgcaactgatatgggaaaaaaacagcaaaaa
acatcctatcaactagtgaccatttatgttgaagatgccaatgacaaccgaccaacattt
gataagaacccaattattacctggatttatgaaaacgttccaattaacaccaacgttaca
accattaaagcccatgatgatgattcaggattgaacagtagaatttggtacaccatcgac
tctcagtctccaagagcacactttaaaatcaacagtgaaactggcttgatacaaactact
cacccaatagatagagaggagatctccgagtactctttgaaggtcagagctacagaccag
gcattcacagaacaagacaggttgtataacacagctaccctaaagatcattatacaggat
ttgaatgacaatgcaccaaagtttgtgtctaggaatttgacatatgtgatggaggacgag
ccctttaatttccaggtcacctctattactgctttggacccagatactggccaaggtgga
aatgttgagtaccgtattgtgagtccagatacaggaaagttcagccttgacctcaaaaca
ggagtattgaagctcattggcagtctagactatgaagatgttcctcagtataccctgcat
ataagtgcgacagaccttgggtccccacccctcacctcgtaccaactcttcaatgttgtt
gttgttgatgtgaatgacaatcctcccgagtttactagagatttatttattgggactgtt
agtgaaaataagcctactgggacttcagttgtcaaggtaacagcttatgatcgagactct
ggttcgaatgcagaattgacatacagtattccaagtggggtggaaatggataagttctcc
attgataaacattcaggacttattgtgacaaattccattttggaccgtgagaagaaagac
acttattttttaacagtacatgcaactggcgtttcatacccctttagagtgagtagtaca
tcagttcgaattaatgttatggaccgcaatgacaaccctcccaagtttatttccccagtt
gtgactctcaaagtaccagaaaacagtcctgcaagattgatatacactctgactgtccag
gatttggattatggcaacaacaccaaggtattgtacagcataatgtcggggaacactgac
ggcgcatttaccataggtagatcaactggtgagctttcaacaacaacaaagttggatcga
gagacaaaagcttcttatcagttatcagttcaagccaaggacataacaccaccatattat
actgcgttcgcaaacattactatcttcattgaagaccaaaatgataatcctccagtattc
cagcagtccctgtatagttccaccatttcagaactgactcctccgggcacttcaatcctg
aatcttacagcaagtgacaaggattctggctctaatggaaacattgtttacactcttagt
aatgacacttatggtgtttacagtattgactctagaactggtattgtctatagtgcagca
agatttgaaacaagcatcaaacaagagtacaacttcttctgtattgctaaagaccagggg
caagatcctaagatggcaattgttcccgtcaggatcaagattgaagacaaaaataaccat
gccccgcagtttactaagacaccctatgaggttcacatattccccaacacctctgctagt
gccttggttaccatggttacagccactgatgcagacacggataaaagcaccaatggtaag
gtgacttacagacttgacgattcaaagaattccactagcttgtttgtggttgagagcaac
acaggaagtgtgaggacttcagctggatttagcaacccgccccaggggagacacgcgtta
tacatcatcgcagaagaccatggttcgccacctttaagagggtacggtattgtccagata
gtgatcggaaacatccaagatgacccacccaggtttctgaaccagactccagcaagagtc
agtatacccgagaactccaaggtggggtcctatatcacaactgtgagagcaagagcttct
agtgatgcccaggtgacatatagtattatcagcggaaacaagggaagagcattttatgtc
gaccctttcactggtgtgatatctgtggcatccgctgacgctctcgactacgagtcaact
aagaacttcagactccaccttgttgctacacctcagggatgggtttcgctaaacgggtac
atgatactggatatcaatgtgattgacagaaatgacaactccccagccttccacccttca
aacatgcttgctcaacttgcagaggacactggggcctttaaaccacgttttgttgtcaag
gtaacagcaacagatgttgattcaggaaccaatgggaaggttacttactctatatggaca
ggtaatgaggcaggtgttttcactattgactctaccactggtgagattaccacagcaaaa
ctactagacagagaaaccaccgcaagctttgacctggttatcagaggcacagatagtggg
atccctcctaagtcgaccaactgtcaagtgaaggtagtagtgactgacctcaatgacaat
ccacctttgtttgaccccctgtctgaggtgaacatcagagaagacaccagaactggggca
gtggtaacaagcgttgttgcgacggatactgacaaggaatcaagacttacatacaacctg
aagtctgcaagtaccccagggatgttcagtgtgggacgattcaatggcgctgtcagttta
ctaaagcggctagactacgagaagacgaacaagtattcactgaacattgcagtaagcgat
ggcttgcactccgcagaaaagaccctaactatcaatgtcctggacacaaatgataacact
ccaaaattcctgaatagctcctaccaagttaccctctccaagaccatccctgctgggaga
gccatactgagggtgagcgcaaccgaccaggatagtggcagtaatgcccagatcaagtat
tccttccccatcaccaacagcgaccagattgactacaagattgacgcagacactggtgtg
atctcagcgcgaaggactattgatgttagaataagagactcgtttatccagatccctgta
caagcaatggaccaaggggttcccccacagagagcgctagtatatgtaaggatcatcatt
accagggaacccaaatttgagctgccttcctacttcggaaaggtccctgaaaatgctatg
atgggtacgtctgtgcttacggtccgggtcactgacaatgctgccggcttacctctaggc
cgcatcagttataatattgaaaacagcaactacttccgcattggtcagcgcagtggggtg
attagcgtaaataagcctttggactacgagaccaagaggcggtttcttctagtggtgagt
gccattgacgacacagcaccctccaagcccgtacgagtgcccgtctacatcaacgtgagt
gacgtgaacgacgagaagcctgtgttcggccaaagtgggtacatggctcagtggagtgaa
gggatacctgtgggaaccatcgtcgtgaacgtctcggccgccgataaagactcgggagca
aatggtcgggtgtggttcgccatccagtcgggagacgataagggttcgtttgcgatcgat
aggaagacgggtgtgattcggacgcaaagagcgcttgatcacgagacaattaagactcat
cacgtgtcagtgcgggcaactgatgaaggctctcctccgatgcacacggacgtgtctgtg
actataagagtcctggacctgaatgacaaccctccggtgtttcgcgtgcccggacctaac
gacgtgcaagtcctcgagaacttaccgctgaactcgaggttgtacgagatcaacgcgaca
gaccgagactctggcgccaacgcaagactctccttcacggtgattggtggcaccggacaa
ggtttgtttttgatcgacaaatttagtggttggctcactaccaacataacctttgactac
gagaatactgcggtttatcagtacagtctcaccatcaaggccacagacgctggtaacccg
ccactctccagcaacatcaccatcatcgtcaatgtcgcggacgaagacgagtacgacccg
agcttcaaccgaatggattacaaattcgacgttcctgggaacgccaaaatcggagatttc
gtcgggcaggttacggccactgatcgggattcgggtgatcaaggccgtgttttcttcgtg
ttctacaatcctacgagtaacgctttaaagatgaatgctaccacggggatcatcagtgtc
aaccgaacactaaacgatggaagttcgctggagactcgtgctagacgaagcctcgacgaa
ctcttgattggcttcgaaatcggctcgagtaggagtcggatgcgaagatcggcagaaagt
caggaattgcgttacactattcgtgcgtacagtggaaagatcggatctgagaggttcgcc
gatgtcccagctagtgtccttgtggatttcacttgccccggatgcatggtccccaccaca
ggagctcgtgagggtgatcccattaccggtactgcactcgcacttattgtcggcctggca
gtattagcgggcgtcattctactagcctttgtcgttgtactgctgtttatatacagtcac
cgcaagaagagacgaacgcgtcaaaatccacctttgcgtttcgatggatccttcgacgag
atcactgttcacccaagaaccacgggtaacgcgaactacgtctctgccgagagtatctca
ccgcgagcgttccccgcagagtactcgcctctcagccgcaacaccgactccaacagcaca
ccctcggggacggacgcttcggatactccaggcagctccggaagcgcttcgagtggccga
ggatcttccgaaggggactttgacgagcaaccggtggcgatcgtgaatgccgacatcggt
agctttcattcagataacaacgctaagacgattgtcgctgactctggtattcaacaagat
gacgacgaccagatatcgcaactcactttgagtgacgggtctgggattttgcacgtcgac
acgcttaatggcagcgagtcgaagagcgataagacggataaaatcctagctcggctggag
tttcagagtgttgagagcatgcacgtgtttggagaggaaggcgggggcgaggctgatggt
ggtcacgacgtgggaaaccttctctacgccaagctcgccgaggctgatgccgacgacgaa
tcgatcgttgatggtccacgatcgtatatcgacgaggggcacgatcacccatcgtacgga
gggtcgctgagctcgatcatcgggagccaagaagagctcactggtagctataattgggac
tatctactcgactgggggccgcagtttcagccattggctgaagtgttcttagaaatcggt
cgaatgaaggacgaagggggtgacaagaaagaagtcacacgtaatgggagcatcccttcc
tcgagtcggttaagaccgaacttatcaggaatcgcgactgttgatatgttatcatcgatg
tcatcattaccgcgctcgcctgtcagccctccttcgacacaatactcttcgccagcgttc
tcacccaacttcacccccgccatcacccccctcattactagatcaccctccgtgtccccc
ctggacacagggaatgtgtcccctgcgtacgcatcccgcggggtgacgcctaacggttca
cgccctacctctacacacatcgttaagcttcaaaatgaagacgacgcatactcggaactc
tcgcattcgccttcgatatcagacaacgagtccaatgcagagatagatgtataa
DBGET
integrated database retrieval system
