KEGG   Nematostella vectensis (starlet sea anemone): 5512572
Entry
5512572           CDS       T01037                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
nve  Nematostella vectensis (starlet sea anemone)
Pathway
nve03020  RNA polymerase
nve03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:nve00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    5512572
  09124 Replication and repair
   03420 Nucleotide excision repair
    5512572
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nve03021]
    5512572
   03400 DNA repair and recombination proteins [BR:nve03400]
    5512572
Transcription machinery [BR:nve03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     5512572
DNA repair and recombination proteins [BR:nve03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      5512572
SSDB
Motif
Pfam: RNA_pol_Rpb4 Maelstrom Tfb4 GSCFA
Other DBs
NCBI-GeneID: 5512572
NCBI-ProteinID: XP_001632940
UniProt: A7S5W7
LinkDB
Position
Unknown
AA seq 138 aa
MATGGQTADEEDATELQFPKEFESAESLLNSEVYMLLEHRKTQNESAEEEQELSEVFMKT
LGYTQKFSRYKNRETIAQVRSLLGKKKLHKFELACLANLCPETAEEAKALIPSLEGRFED
DDLQQLLDDIQTHRSFQY
NT seq 417 nt   +upstreamnt  +downstreamnt
atggcgactggtggtcaaactgcggatgaagaggatgccacggaattacagttccctaaa
gaatttgaaagtgctgaatcattattgaactctgaagtgtacatgttactagaacatcgt
aaaacccaaaatgagagtgcagaggaggagcaagaactctctgaggtgtttatgaaaact
ctaggatatacccagaagtttagccgttacaagaacagagaaactatagcacaagttcga
agtttgcttggaaagaagaaactacacaagttcgagctggcctgtctagctaacctgtgc
ccagagacagctgaggaagccaaggcacttatcccaagtctggagggaagatttgaagat
gatgatctccagcagcttttagatgacatccaaactcacagaagctttcagtattaa

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