Nematostella vectensis (starlet sea anemone): 5512689
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Entry
5512689 CDS
T01037
Name
(RefSeq) transcription factor Sox-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
nve
Nematostella vectensis (starlet sea anemone)
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nve03000
]
5512689
Transcription factors [BR:
nve03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
5512689
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
5512689
NCBI-ProteinID:
XP_001632997
UniProt:
Q3S381
LinkDB
All DBs
Position
Unknown
AA seq
343 aa
AA seq
DB search
MSATTILTPSPNPISGNGTNGNESTKANSADRVKRPMNAFMVWSRERRRKMAQDNPKMHN
SEISKRLGSEWKLLSEQEKRPYIDEARRLRAVHMKEHPDYKYRPRRKSKTLLKKDNKYAL
SMLSAGQAGGQVQRTVGQNPGDHFVQMAGYGYSQGLSYNPNDPYGAMYGSNAMSPHTPTQ
LQPPMNGLPPHGSYSNMSASAQIYPSVSVMTSQPVGAASYSINGTSGVMSSITPPYTQHS
PLILPNIKQEMPSPTGNMNVGGVTRNCADQLGDMINTYLPPADTANPVSTVNGLPSQTNT
ISSRYSQHWQDQNTISNMPNHPTLAGNISSISGVRGTMPLSHM
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctactactattctaacgccgtcgccaaatcctatttctgggaatggaactaac
ggcaatgagagcactaaggctaactcagcggatagagtcaaaagacccatgaatgccttt
atggtttggagccgagagcgacggaggaaaatggcgcaagataacccaaagatgcataat
tctgagataagcaagaggcttggctcagagtggaaattactgtcggaacaagaaaagcgt
ccgtatattgatgaggcccgaagacttcgcgccgttcatatgaaagaacatcctgactac
aagtatcgtccacgcagaaagagcaaaaccctcctgaaaaaagacaacaaatacgcactt
tctatgctgagtgcgggccaggctggagggcaggtacaacggaccgttggacaaaatccc
ggtgatcacttcgttcagatggctgggtacggttactctcaaggactgagctataatcct
aatgacccgtacggtgctatgtatggaagcaacgcaatgtccccgcatacaccgacgcag
cttcaaccgccgatgaacggactaccacctcatggatcctactcgaacatgtcagcatcc
gcgcagatttatccgtccgtaagcgtgatgacaagtcaacccgttggcgctgcgagctat
tctatcaacgggacaagtggtgttatgtcgtcaatcactcctccatacacgcagcacagt
cctttaatactacctaatatcaagcaagaaatgcctagccccacaggcaacatgaatgtc
ggtggggtaacgcgaaattgtgctgatcaactcggtgacatgatcaacacttatctccct
ccggcagatacggcaaacccggttagtacagtcaatggtcttccatctcaaacaaatacg
atctcgagtcgttattcgcagcactggcaagatcaaaacaccatctcgaacatgccgaat
catcctacgctagccgggaacatatccagtatatctggtgtccgtggaacgatgccactc
tctcatatgtaa
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