Nematostella vectensis (starlet sea anemone): 5513114
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Entry
5513114 CDS
T01037
Name
(RefSeq) ATP-dependent RNA helicase DDX55 isoform X1
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
nve
Nematostella vectensis (starlet sea anemone)
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nve03009
]
5513114
Enzymes [BR:
nve01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
5513114
Ribosome biogenesis [BR:
nve03009
]
Eukaryotic type
Pre-60S particles
Helicases
5513114
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
CTT_SPB4
ResIII
Cas3-like_C_2
Helicase_C_2
AAA_19
UvrD-helicase
SBF_like
Cadherin_3
RGS12_us1
Motif
Other DBs
NCBI-GeneID:
5513114
NCBI-ProteinID:
XP_001633398
UniProt:
A7S4S3
LinkDB
All DBs
Position
Unknown
AA seq
583 aa
AA seq
DB search
MASTWESSRPSLSQTTLNSMKKMNFSTMTPVQAAAIPLFMSNKDVAVEAVTGSGKTLAFV
IPIIEIILRREDKLKKHEIGALIITPTRELAQQIDEVVSTLVEDIPNIRRLLLIGGADPN
ADLKAFKYEGANIIIGTPGRLEDFLARQQDGINLASHLKSLEVLVLDEADRLLDMGFEAS
INTILGYLPKQRRTGLFSATQTDEVEALVRAGLRNPVRVTVREKLTKTKNVQRTPSTLQN
FYLICRSHEKFSQLVAFLKARKDKKNMVFFSTCACVNYFSKALTKFLPNVHIMALHGKMK
SNRHKIFDSFRKLESGILVCTDVMARGVDIPEVNWVIQYDPPSSANAFVHRCGRTARIGN
EGNAVVFLLPTEDSYVDFISINQKVPLQALEPDKDAPNITAKLKKLATKDRDLFEKGTKA
FVSFVQAYKKHECSLIFRFKELDLGLLAEGFGLLRLPSMPELRGVTIDSFTPHDIDYDKI
RYQEKAREKQRQKRIQALVESGGEGVAKKKRKKETVAWSRNKERQIKREKRRARREFQRK
QKHKFDQNDLDELASEARLVKKLKQGKISSEQFNEEFVGDDSS
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccacgtgggaatcgtcgagaccgtctttatcacagacgacgttgaattcgatg
aaaaaaatgaacttttcaacaatgaccccggtacaggctgctgctattccactgttcatg
tcaaacaaagatgttgctgttgaggcggtaacaggatctggcaagactttggcctttgtg
atcccaatcattgagataatcttacgaagagaagacaagttaaaaaagcatgagattggg
gcactcatcataacccccacacgagagcttgctcaacagatagatgaagtggttagtaca
ttggttgaagacattccaaatatcaggcgacttctgctcattggcggggctgatccaaat
gctgatctgaaagcctttaaatatgaaggggcaaacattattattgggacaccaggccga
ttggaagattttttagcaagacaacaggatggcatcaacttagcatctcatttaaaatca
ctggaagtactggtacttgatgaagctgatagactacttgacatgggatttgaagcaagc
atcaacaccattcttggctatttacccaagcaaagaagaacaggcttgttctcagcaact
caaacagatgaagtcgaggcactcgtgagagcaggtttacgcaatcctgttagagttacc
gttagagaaaaactcacaaaaacgaagaatgtacagagaactccctcgactcttcaaaac
ttctatttgatatgtcgaagtcatgaaaagttttcacagctagttgcctttcttaaagct
cggaaggacaaaaagaacatggtatttttcagtacatgtgcctgtgtcaattatttctca
aaagctctcacaaaatttcttccaaatgtacatatcatggcccttcatggaaaaatgaaa
tctaaccgtcacaagatctttgattccttcagaaagctagaaagcggaattttggtttgc
acagatgtgatggcaagaggtgtagatatcccagaagtcaattgggtcatacagtatgac
cctccaagtagcgcaaatgcttttgtacatcgatgtggccggactgcccgaatagggaac
gaaggaaatgctgttgtatttctgctgcccactgaagattcgtacgtagactttatatca
ataaaccaaaaggtcccccttcaggcccttgagccggataaagacgctcccaatatcact
gctaaactaaagaagctagcgaccaaggacagggacctttttgagaagggaaccaaggca
ttcgtctcctttgtccaagcctacaaaaaacacgaatgcagcctcatcttccgattcaaa
gagttggatcttggtctccttgccgagggatttggcttactcagattacccagcatgccc
gagttgcgcggtgtcacaattgacagcttcacgccacatgacatcgactacgacaaaatt
cgctaccaggaaaaagcgcgcgagaaacaacgccaaaagcgcatacaagcgctcgtggag
agcggaggtgaaggtgtggcaaagaaaaagcgtaaaaaggagacagttgcctggtctcga
aacaaagaacgccagataaagagagaaaagcggagagcaaggagagagttccagcggaaa
cagaaacataaatttgatcagaacgatttggacgaactggcatcagaagcgaggttggtg
aagaagttaaagcaagggaagatctccagtgaacagttcaatgaggagtttgtaggagat
gacagctcatga
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