Nematostella vectensis (starlet sea anemone): 5513247
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Entry
5513247 CDS
T01037
Name
(RefSeq) ubiquitin conjugation factor E4 B
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
nve
Nematostella vectensis (starlet sea anemone)
Pathway
nve04120
Ubiquitin mediated proteolysis
nve04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
5513247
04120 Ubiquitin mediated proteolysis
5513247
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nve04121
]
5513247
Enzymes [BR:
nve01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
5513247
Ubiquitin system [BR:
nve04121
]
Ubiquitin ligases (E3)
U-box type E3
5513247
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
TUG-UBL1
Motif
Other DBs
NCBI-GeneID:
5513247
NCBI-ProteinID:
XP_032238672
LinkDB
All DBs
Position
Unknown
AA seq
1100 aa
AA seq
DB search
MSSPMSTSELSADEIRRRRLARLGQSPAVLATPSGQSSVATNVASPENVIFPKPSCTTPE
SESQDSAYGSLPSSLEFEDTAEVSEKMGKRSSPTISMSPTEGFKFKRSKDGSGSCRDTAV
SPQSLKVNNVTEEQLLSAVRNIFHVSWKKGSLEDKSVTYLAGVAAEHLDNSTTVYVDMVD
LMNQVLMEQLVPEDNALLSNQDSSTIAEETSQMVIDDDKMEPKHSAQSSNSPGTSTAGSQ
TNGLASKEGNISGKKPKDNRLSYLMECYERVGSLEKMFPKRSQDSKWVDFLRQAKGQCTS
FALLLMQGVLTEESKPSPKTLPLVHYLAHERTKVPPGFLVDLVMMAVRDTDTLSQVFTPV
LLGIMKEMKNSSLAKDDYKFLLLSLAELCNIRTGSSSLRPICNMLVKLSCWCPAPLSAAA
GREIEKLSFLGAFLSMSVFAEDSSQVVDKYFSAKCMTTEYVKLTTSSLQTAMQGVRMELF
NIIHSLLVSNGSKEACLQYLSAVLQRNQKKAQMQADDRQVASDGFALNLMVVLQQLCVKV
KVEKIDNLYLVHPKSKLDLSQETRIKATKDDVQKFKEELGSRGGAWLEVKFPTECFFMTF
LAHHQAILPCCRRYSRRLRAIRDLTRMIEHLETQESEWMETPMASRNRGLLKKWRGQVEK
LATSKMCSDAGLLDDTLLQGCIRFYGMAAQWMLTLVDSQNEGPSLPLPEAVPKQFATLPD
FFIEDIAEFLLFINMHAPQVFEDPVVTDIVKFLIIFVCSPNYISNPYLVAKLVEVIFVVN
PSIQPRTVKVHELLMGHPLSLAHLAPALMTFYTEVESTGSSNEFYDKFSIRYHISIIMKS
LWEDPVHRMSIIKESRSDRFVRFVNMLINDTTFLLDESLDSLKSINETQQMMANPAEWEA
LTREIRTSRQRQLVTDERQCRSYLTLASETLDMMHYLTRHAREPFLRPELIDRLAAMLNF
NLQQLCGPKCRNLKVKNPEKYGFEPKSLLDRLTDIYVHLNTDEFATAVASDQRSYRKELF
DDACRHLHKTLLKSADVIVEFQRFANRVEQKVVEIAMKEEDLDDAPEEYKDPLMMTVMED
PVMLPTSGKVMDRATITRHL
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctccaatgagtacaagcgagctatcagcggacgagatcaggcgcaggcgtctt
gctcgtctgggacagtcccctgcggtgttggctacaccctctggacagtcatccgttgca
actaatgtagcctctcctgagaatgtcatttttcccaagccatcctgcactacccctgag
tctgagtcccaggatagtgcttatggatcattaccatcttccctggaatttgaggacact
gctgaagtgtctgagaaaatggggaagaggtcatctccaaccatatcaatgtccccgact
gagggatttaaattcaagcgctcgaaggacgggtcaggctcctgcagggatactgctgtc
tccccacagtctttaaaggtaaataatgtcactgaagagcaacttctctctgctgttaga
aacatatttcatgtttcctggaagaagggatctttggaagacaaatctgtaacatatttg
gctggagtggctgctgagcatttagacaattctaccacagtctatgtagatatggttgat
ttaatgaaccaagtactgatggaacagctagttcctgaagacaatgctctactgagcaac
caggacagctctacaatcgcggaagaaacttctcaaatggtaatagacgatgacaaaatg
gagccgaaacattcagctcaatcctcaaactctccagggacttcaactgctggctctcag
actaatggactggccagcaaagaagggaatatctctgggaagaaacccaaggataacagg
ttaagctatttgatggagtgttatgagagagttggatcactggaaaagatgtttcctaag
agatctcaagatagcaaatgggtggattttctgaggcaggccaagggacagtgtacttca
tttgctctactcttaatgcagggtgtccttactgaagaaagtaagccctcacccaagaca
ttaccactagtacattatttggcccatgagaggaccaaagtcccccctggatttctggta
gatctggtcatgatggctgtacgtgacacagatacattatcacaggtttttactccagtt
ctgttgggaatcatgaaggaaatgaagaactcatcattagccaaagatgattacaaattt
ctactattgagtttggccgagttgtgtaatatcaggacagggagcagctctttgcgacca
atttgtaatatgcttgtcaagctttcctgctggtgtccagctcctctctctgctgctgca
ggaagagagatcgagaagctgtctttccttggggcattcttgagcatgtctgtatttgct
gaggacagttcccaggttgttgataagtacttctctgccaagtgcatgactacggaatat
gttaagctcaccacgtcatcactgcaaacagccatgcaaggggtcaggatggagttattc
aacatcatacacagtctgttggtctctaatggcagcaaggaggcgtgcctgcagtacttg
tcagcagtgttgcagcgcaatcagaaaaaagcacaaatgcaggcggatgaccgacaggtt
gcatcagatggtttcgctctcaacctcatggtcgtcctacagcaactgtgtgtcaaggtc
aaagtagaaaagattgataacttatatttagtccacccaaaaagcaaactcgacctgtcc
caggagacacgcatcaaggccaccaaggatgatgtacaaaagttcaaagaggagttaggg
tcccgtggtggggcgtggctagaagtgaaatttcccaccgaatgcttcttcatgacattc
ctggctcatcaccaggcaatcttaccatgttgtcggaggtactcacggcgcctgcgcgct
atccgggacctgacacgcatgattgagcaccttgagacacaggagagcgagtggatggag
acacccatggcgtcacgcaacaggggtcttctcaagaagtggaggggacaggttgagaaa
ctggcaactagcaagatgtgttcagatgctggtttgctggatgataccctcctccagggc
tgcatcaggttctacggcatggcggcacagtggatgttgacacttgtagactctcaaaat
gaaggcccttctttgcctctccctgaagcagtacccaaacaatttgccacccttcctgac
ttcttcattgaagacattgccgagtttcttctttttattaacatgcatgccccgcaggtg
tttgaggatccagtagtgacagatatcgtaaagttccttatcattttcgtctgctcgcca
aactacatctctaacccctaccttgttgccaagctcgttgaggtgatctttgtggtaaac
ccaagtattcagcctcgtacggtgaaggtccatgagctgttgatgggtcatccactctct
ctagctcatctagccccagctctcatgaccttctacacagaggttgagagcacaggtagc
tctaatgaattctacgacaagttcagcattcgttaccacatctctatcatcatgaagagc
ttgtgggaggaccctgtgcatcgcatgtctatcatcaaggaaagcaggtcagaccggttt
gtccggtttgtgaacatgctgataaatgacacaacattcctgttggatgagtctctagac
tcacttaagagcattaatgagacacagcagatgatggctaatcctgcagagtgggaagca
ctgacgagggaaatacgtacaagccgtcaacggcagcttgtgacagacgagcgccagtgt
cgttcctacttgaccctggcctcagagacattggacatgatgcactacctgacccgccac
gccagggaaccattccttagaccagagctgattgaccgtctagccgccatgcttaacttt
aacctgcagcagctgtgtgggccaaagtgccgcaatctcaaggtaaagaatcccgaaaag
tacggatttgaacctaagagccttttggacagactcacggacatctatgtgcacctgaac
actgacgagtttgccaccgctgtcgcatctgatcagcgttcctacagaaaagagctattt
gatgatgcatgtaggcacttgcacaagaccctgctcaaatcagcggatgtgattgttgag
ttccagcggtttgctaaccgagtggagcagaaggtcgtggaaatcgcaatgaaagaggaa
gacctagatgatgcccccgaggaatacaaagatccgctgatgatgacggtgatggaggac
ccggttatgctaccaacaagcggcaaggtgatggatcgtgctactattacgcgccatctc
taa
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integrated database retrieval system
