Nematostella vectensis (starlet sea anemone): 5513516
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Entry
5513516 CDS
T01037
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
nve
Nematostella vectensis (starlet sea anemone)
Pathway
nve03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
5513516
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nve03019
]
5513516
03036 Chromosome and associated proteins [BR:
nve03036
]
5513516
Messenger RNA biogenesis [BR:
nve03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
5513516
Chromosome and associated proteins [BR:
nve03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
5513516
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
5513516
NCBI-ProteinID:
XP_032238949
LinkDB
All DBs
Position
Unknown
AA seq
1839 aa
AA seq
DB search
MNNKSQNTNKPGWQPIIRTWKPGSLSCDQDAAFGAQNTASPFGQTSAASGGLFGNKTQTG
FGSGFGTTQTTGTGLFGAAGTNTGTGLFGGGTVTGSMFGQPASAASTGFGGFGSTAGTNT
GGLFGNTAASGTTTGTGLFGQTQGAAFGGTSTSGFGTSGSLFSAPSTSTTGGSLFGGTTG
ATQSSLFGGTGTGATTAFGGFGAASTATGQAGTPIKFSVIRGTDQVVKNGLTTNVNTQHQ
SITVMKEYETKSFEELRFEDYTLGRKSGATGATASTGGLFSSTPATSASTGGLFGTTATS
TGFGGTLAFGQSKTGFGTASDGLFGQTATSQTGGLFGGTTTTQAGGLFGGGATGFGAATG
TTGTGLFGQSTGFGQTSQQSSLFGNKLATSTTGFGATNTGGLLGLSAQKPATGFGTTGLG
TGTFGAGTTGTQGLFGNTATAFGKPATGLGTTGFGGTGTGLFGGTTGLGTTTTGLGSGLG
GSMFGNTLGQPATGLNLGGVTNNLNIATSNQASLLLAQQQLQQHIMALNNSPFGDSKLFR
NSLTEKTKADSVANTTTVNSQRLGSPSHYKVSAKLTAKIKPRPISNHSMNKSQMFDGLEE
ESGVSPDTFVPRKSIKKLVIRNRNTPEQMSGSADNIRLRVANDDEEDLVAPVSPYPPSSH
SSRAIQTPPGPMTDLNDSRGSEHTTPIGVRFSRNAGQPLNDTLEDLNARRRDRRVEAEGA
ADGGDEADGEPALEPCGIILTRPEYYTVPSIEQLNDMVDANGEVWVDDFVIGREGYGEVK
FPGKTNVADLNLDEIVFFRRREIEVYPDTYPNKPEVGEELNKKAEITLIKVWPNDKTTHK
PIKTPERLKQQGWLERVEAATAKLGATFIDYQPHTGSWVFMVEHFTRYGIHEFLDDENIQ
KRLKRPPVDTNLKDIDADKEKLAMLEKLRAAQEKQEAYEREKAQRDEIATEQATASASEN
MQQDEESEDMEDIDQQTFPDEIYEDKEEGGYDSPASHLIASSLGISAHRTQLMKASIFGE
SEAAPRSPKLKERPGDHSFAMDDDTQRIAFPGIFRHSAAQSPKFHRMLDAPGSGPALFGS
PRIGTLPPKFPMAHDFTSAAPSSPMMCPNAVGSAFDMGTKLVGARAHQRDLVPKDDSIVD
GKENLIADMGLVMGRSFRVGWGPGFTLVHSGSPLGTQTKKPASMMHSSVTGDALFSRSRL
LTESTGGQSPFGVVVERLNIAPDLKPDSPSMLKQHLQALEVELEHCTSSQASDGCPFFEP
TPGTKALHRHADVAKKNQETQGSSSSRDVAFQHSLVWDLVVALWGDLGDKDTASQGTYEH
QVARRNALSHWLAEAAKDRVKVEVDKANFEDGDYLNAIFSHLTGQQISKASRLAQRHGDY
RLSLLLSQATSSSAVRYLLQKQLSDWEQVKADSYMTELRIKVYALLAGCMVWRTSDDFLN
TCEDLDWKRVLAVHMWYHNSQTSSISEILSGYEDAFKGRTSYGKYGKPPHPPYREIDEDS
ESEEEEESGGGVSIRDTCYHLLKLFCKRSHRLERTLAPATYTPHQLDYRLSWHLYQALQS
LGYSHLSQYHAGMLHSGFASQLEQLGMWEWAAFVLLHITDKERREHSVRRLLFRHCQLSP
PDEHQRKEQFLREKLLIPPEWIHEAKVCIRAQHDSMPSEEALHLLKSSHWNRSHNVLISS
LASDAIINDDYDTLKALLAEMAPRERSSNIMGWETGGQVLLDFLNITEKFQDLSKGSCEP
SKREFEEIHSQVASLCNRINNLPCATAKDRLCQYELAKQCASYLKLTTSELSDHCQDEDA
PLPTQMIVPHINKLPLPEDCALAELAELTENYVRETTRV
NT seq
5520 nt
NT seq
+upstream
nt +downstream
nt
atgaataacaaaagtcaaaacacgaataagcctggatggcaacctattattcgcacatgg
aaaccaggatctctatcttgtgatcaggacgctgcatttggtgcccagaacaccgcctcc
ccatttggccaaacatcagctgcttcaggcggcctgtttggtaacaagacgcagactggg
tttggctctggctttggaaccacacagaccactgggactggcctctttggtgctgcaggc
accaatacagggactggactgtttggtggtggcactgtgactggcagtatgtttggccag
ccagcctcagcagcgtccactggatttggcgggtttggctcaaccgcaggcacaaacact
ggggggctgtttggtaacactgcagcatctggcaccaccacaggaactggtctgtttggt
cagacgcagggagcggcttttggtggtacctctacctctggttttggtacttcagggagt
ctcttcagtgctccatccacaagcacaactggtggaagtctgtttggaggaactacaggt
gccactcagagctctttatttgggggtactggtactggagcaaccacagcatttggaggt
tttggtgcagcatcaactgctacaggacaagcggggacgcctattaaattttctgtcatt
cgagggacagaccaagtggtcaagaatggacttacaactaatgtgaacacacagcatcag
agcatcactgtgatgaaggaatatgagaccaaaagctttgaggaattgcgctttgaggac
tatactctgggccgtaagagtggcgcgactggggccactgcatcgacaggaggcctgttc
tcttccactccagcgacatcagcatctactggcggtttgtttggaaccactgccactagc
actggttttggggggactttagcgtttggacagagcaagactggatttggaacagcaagt
gatggactatttggacagacagcaacttctcagacaggtggcctctttgggggtactacg
actactcaggcgggcgggctgtttggtggtggtgcaactggatttggggcggccacaggc
accactggtactggactgtttgggcaaagtactggctttgggcagaccagccaacagtcc
agcctttttggtaacaagcttgcaacctcaacaactggctttggggcgaccaacactggc
ggtctgctggggctgtcagcacagaagcctgcgactggctttggtacaacaggccttggc
actggtacatttggggcaggaacaactggcacacaaggcttgtttggcaacaccgctacc
gcctttggcaagccagccactggtctcggcactactggttttggtggtactggtactggc
ttatttggcggtactaccggccttggaactacaactacaggcctaggaagtggcctgggg
ggctcaatgtttggtaacaccctcggacaaccagcaactggcctcaaccttggtggggtt
accaacaatctgaatatcgccacaagtaaccaggcaagtttgttattagcacagcagcag
ctccagcagcatatcatggccctcaacaactctccttttggtgactctaagcttttcagg
aattctttgacggaaaaaacaaaggctgatagcgttgccaatacaaccactgttaactcc
caaagattagggtcaccctcacattataaggtttctgcaaaactaactgccaaaataaag
ccacggccaatcagtaaccattccatgaataagtcacagatgtttgatggattggaggag
gagtcaggggtgagtcccgacacatttgtgccgcgcaagagcatcaagaagcttgtcatt
aggaacagaaacaccccagagcagatgtctggctcagctgataatatcaggcttcgtgtt
gccaacgacgatgaggaagacctggttgcgccagtgtcaccctaccctccgtcatcccac
agcagcagagcaattcagacgcccccgggacccatgactgacctgaacgactcgcggggg
tctgagcacaccacgcctatcggtgtccgattctcacgtaatgctgggcagcctctaaat
gacaccctagaggatctaaacgcccggcggcgggacaggagggtggaggctgagggtgct
gctgacggtggagatgaagctgatggtgaaccagcgctagagccgtgcggtatcatcctc
acgaggcctgagtactacacagttccatctattgagcagctgaatgatatggtggatgcc
aatggggaggtgtgggttgatgattttgtcatcgggagagagggatatggcgaagtgaag
ttccccggaaaaaccaatgttgctgatctcaatctggatgagattgttttcttcaggcgg
cgtgagatagaggtctacccagatacctatccaaacaagcccgaagttggagaagagttg
aacaagaaggcagaaattacgctgatcaaggtctggccaaatgacaagaccactcacaaa
cccatcaagacccccgagagactgaagcagcagggttggttagagagagtcgaggcagct
acagctaaacttggtgctacctttatagattaccagccacacactggaagctgggtattc
atggtggaacatttcacacggtatggcatccacgagttcctggacgatgagaatattcaa
aagaggttaaaacgtccacctgttgacacaaatctgaaggacatagatgctgacaaagaa
aagcttgctatgctggagaagctaagagcagctcaagagaagcaggaagcctacgagaga
gagaaagcacaaagagacgagatagccacagagcaagccacagcttctgcatcagagaac
atgcaacaggacgaagagagtgaagacatggaggacattgaccagcagacttttcctgat
gagatttatgaagacaaagaagagggtggatatgattcccctgcaagccatcttatagca
tcatcccttggcatcagtgctcatcgcacccagctcatgaaagcctcaatctttggcgaa
tctgaggctgctccacgctctcccaagctcaaggagcgaccaggtgaccactcctttgcc
atggatgatgacacccaaaggattgcatttcctggaatatttaggcacagtgcagcacag
tcgcctaagtttcacaggatgttggatgcaccaggcagtggaccagctttgtttggaagc
ccaagaataggcaccctacctcccaagttccccatggctcatgacttcaccagtgctgca
ccttcttcaccaatgatgtgcccaaatgcagtaggaagtgcctttgacatgggaaccaag
cttgttggagccagagcccaccagagggatctagtccccaaagatgactccattgtggat
ggcaaggagaaccttattgcagacatggggcttgtgatgggcaggtcttttcgtgtggga
tgggggccagggttcactctagtccacagtggaagtcctctcggcacacagaccaagaaa
ccagcatccatgatgcattcatctgtcaccggagatgcattattttcgcgatcaagactc
ctgacagagtccacaggagggcagtcaccctttggtgtggtagtagagaggttaaatatt
gctcctgatttaaaaccagactcccctagtatgttgaagcagcacctgcaagcattagaa
gtggaattagagcactgcacctcatcccaggcaagtgatggttgcccattctttgagcca
acacctggtaccaaagctctccaccgacatgctgatgtggcgaaaaagaaccaagaaacc
caagggtcaagttctagtcgtgatgtggcattccagcacagcctggtatgggatctggta
gtagcactgtggggtgacctaggtgataaggatacagcaagccaaggtacttatgagcac
caggtggcaagacggaatgcactctctcactggctggctgaggctgccaaagatagagta
aaagtagaagtcgacaaggctaactttgaggatggtgactacctcaatgccatctttagc
cacctaactggtcagcagatcagtaaggcatctcgactagcccagcggcatggtgactac
cgcttgtcattgctcctctcacaagctactagtagttccgccgtccgataccttctccag
aagcagctaagcgactgggaacaggtcaaggctgacagctacatgacagagctgcgcatc
aaggtctatgccctcctggccggctgcatggtgtggcgcacttctgatgattttctcaac
acatgcgaagatctggactggaaaagagtccttgcagtgcacatgtggtatcacaactct
cagacgtcatctataagtgaaatactctctgggtacgaggatgcatttaagggcaggacg
agctacggcaagtatggaaagccaccacaccctccgtacagggaaatagatgaggactca
gaatctgaggaggaagaggagagtggtggtggtgtctctatccgcgacacatgctatcat
ctgctcaagctgttctgtaaacgatcacatcgcctggagaggaccctggcgcctgccacc
tacaccccacaccagttagactacaggttaagctggcacttgtaccaagcgctccagtct
ctgggatactctcatctttcacagtaccatgccggcatgttacacagtggtttcgcatct
caacttgaacaactagggatgtgggaatgggcagcatttgttttacttcacatcactgat
aaagagaggcgtgagcattctgtgcgtaggttgctgttccgtcactgtcagctctccccg
cctgatgagcaccagagaaaggagcagttcctaagggagaagcttcttatcccaccagag
tggattcatgaggcgaaggtatgcatacgtgctcagcatgactctatgccaagcgaggaa
gccctgcatctgctcaaatctagccactggaacaggagtcacaatgttttaatctcaagt
cttgctagtgatgccattattaatgacgattacgacactcttaaggcattattagcggaa
atggctccaagggagagatcttccaacattatgggctgggagactggaggacaggtgtta
cttgactttctgaatatcactgaaaagttccaagatctttccaaaggatcatgtgaaccg
tccaaaagagaatttgaagagattcattcacaggttgcatcactctgtaaccgcattaac
aaccttccatgtgcaacagcaaaagacagactttgccaatatgagctggccaaacagtgt
gcaagttatctcaaattgacaacaagtgaattgagtgaccattgccaagatgaagatgct
cccctccccacccaaatgatagtaccgcacatcaataaactgccactgcctgaagactgt
gcacttgcagagttagcagagcttacagaaaattatgttagagaaacaacaagagtatga
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