Nematostella vectensis (starlet sea anemone): 5513899
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Entry
5513899 CDS
T01037
Name
(RefSeq) vacuolar protein sorting-associated protein 13C
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
nve
Nematostella vectensis (starlet sea anemone)
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nve04131
]
5513899
Membrane trafficking [BR:
nve04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
5513899
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
Motif
Other DBs
NCBI-GeneID:
5513899
NCBI-ProteinID:
XP_032239300
LinkDB
All DBs
Position
Unknown
AA seq
1485 aa
AA seq
DB search
MFEQLVVSVLNSVLGRYIRDLDSSNLELAVLQGQAVLRDLELRDDALDGFDLPVQVTHGF
VGEISLTIPWTNLYSSPCDICIEDVYLIASPVKEQPYDAEKARASELAVQRKRLRQIEES
LAKKATESTDGIAHAENGDSFVEKLMAQVVKNLKVSVKNIHIRYEDQVTSCESPFAVGFT
LQNLSAETTDDNWKTSVVNAAAKTVFKLVSLDNLAVYWNPDQHAYDLYGNHWNWKGKMED
GISTKAKQPKDYEYILQPLSAECHVIMDQTSKVEMDVPKLLVEVIQQELSLAMSQKQFHN
LMDVIDSFELMSVNQQYKKYQPTVKVHGSASKWWKYAYTAICEEGIRSWSWERIKAHRAR
YRAYKSLYKRKLKGFHDSERESSLRHLQALEDDLGIPSVLIAKQQAELEVPPEMREVLSP
AKTSSGSWWSWLGGGAGAPAETLPLEEEEDLLSKLTVEALPKDEKEKLYKAIDYSEGARP
IKYPIEYIKRRLTFHLDSCLVTLLDVQKRKIAEVATQGFAAAIEQRPGGDAMRFQAEVNG
FQVLGTPNSSDGQSRPCLMSSKTSLGSDGKALLSFTAETNPLHVCAEYAVALKVEPVEIR
YDNITVDKVIDFFDVPNYSKLQELEAAAANKLRELRSWTRSGLEYAIAQHKVTFVDMDVR
SPYIVIPEYGNLARKGNVLIVDLGHLTVVSDLVDRDKVPVKKRSDDELAEMFYDKFDVKV
TDVQLILAEKGSDWHSLHVQSSTPEHILPATCMELQAYKSISAEYPELPEFKAISVLPTL
WIKLSDTKYKQLMQFLKNFPLGTQTRKEVEAKGKPLLDKQWVRTASTLSVDEVTSIQAIL
SEKLHPKSDGEDDEWFDSVEYLPGDRPGSRASQAPDRTYFTGEFAIHQLRVTLDKANNKR
DKPYISLNITNLTTTVTVNTWDLSVKTSLGFIQLIDNYFQGDDGNALAVLSSSGNDDWIS
VDYVQADPKGPEFSTKFENTQQSVRVKFSSIQLTAVKEALAAFEIFLLELLESDDVKPLT
PLLPSKFQPLETIEENEQLETRAIEPVNREVVDIAIEAHVEKISIKMVSRQKLVGCVHVK
GLKVKIEQRGPETKIVTMLKDLGITNAMVGTFYPKILCLEDNTVFECEITLFDNKSNSVK
DPLAVDVLIDLKIGRFKFVFLSGFTAHMQSFVQALISPETMSYAQNITQNALKTKAKSLQ
ERGTKLGLSINVHAPKLVIPGHSGSRDMLVADLGNLEINNAIEKTRHGVLIDNMEVTLSS
FEVRCFSEEENVFSNHLVEPIRLDIVVRRRLDPAASHIPLIEVDAVLELLQVNLATPDFK
LLMMVINRNLTEGIKEASDSLLSPSPSDEQVESEQGAGRRSRIGSALQLESREASAHNTD
DEISLKCNFNVHKVLVNSPRVVDGRACRYLILNVDKLVSTLAIDGWTTNVHADLGTIQLM
DHFNKDLTGEPVCILSSSKEEDLITLDFKMADPSCPEFESAHCSV
NT seq
4456 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagcagcttgttgtctcagttctgaacagcgttctcggccgttatatacgtgat
ctagacagctctaatcttgaactcgcagttcttcaaggccaagcagtgttgagggattta
gaattgagagatgacgcattggatggatttgatctgccagttcaagtaacacatggattt
gttggtgagatctctctgactatcccatggaccaacctgtattcatcaccctgcgacata
tgtattgaagatgtctatctcattgctagccctgtgaaagaacaaccatatgatgcagag
aaagcccgggcaagtgagcttgcagttcagagaaaacggctgaggcaaattgaagaaagc
cttgcaaagaaagctactgagagcacagatgggatagcccatgcagagaatggagactca
tttgttgagaagttaatggcacaagttgtcaagaacctcaaagtgtctgtaaagaatatc
catatcagatatgaggaccaggttacgtcatgtgaaagtccatttgctgtgggattcact
ctacaaaacctttcagctgagactacagatgataattggaagacaagtgttgttaatgct
gctgcgaaaactgtatttaagcttgtgagtcttgacaacttagcagtgtattggaatcca
gaccaacatgcctatgacttgtatggcaaccactggaattggaagggtaaaatggaggat
ggtatatctacaaaagctaaacagccaaaggattatgaatacattctgcagccattgtcc
gctgaatgccatgtcatcatggaccaaacgtccaaggtggagatggatgtaccaaagctt
ttggtggaagttatccaacaggagttatcacttgccatgtcacaaaaacagttccacaat
ctaatggatgtcattgactcatttgagctcatgtctgtgaatcagcaatacaagaagtac
caacccactgtcaaagtccatggcagtgccagcaagtggtggaagtatgcttatactgca
atctgtgaggagggtattcgtagctggtcatgggaaagaatcaaagcgcatcgggctagg
tatcgtgcatataaatcgttgtacaagcgaaagctcaaaggattccatgactcagagcgt
gagtcttcccttagacatttacaggccttagaggatgacctaggtatcccaagcgtactg
attgctaagcaacaggctgagctggaggttccgcctgagatgcgtgaagtcctgagtcct
gcgaagacaagttctggatcatggtggtcttggctagggggaggtgccggagcaccagca
gaaacattaccactggaggaggaagaggaccttttatccaaacttacggtggaagccttg
cccaaagacgaaaaggagaagctctacaaagccattgactacagtgagggtgcaagaccc
attaagtaccccatagagtacatcaagaggaggttgactttccatctggactcctgtctt
gttactctccttgatgtgcagaaaaggaagatagctgaggtagccacacaaggctttgct
gctgccattgagcaacgtcccggtggggatgcaatgagattccaggcagaagtgaatggt
tttcaggttcttggtaccccaaactccagtgatggccaatctagaccgtgcttgatgtct
tccaagacttcactgggaagtgatggtaaagcgctactgagtttcactgctgagacaaac
cccttgcatgtgtgtgcagaatatgctgttgcactcaaggtggaaccagtggagatcaga
tacgacaatatcactgtggacaaggtcattgacttctttgatgtcccaaactactccaaa
ctgcaagagctagaggcagctgcagcgaacaaactgcgggaattgagaagctggacccgg
tcagggttggagtacgccatcgcacaacacaaggtgacctttgttgacatggacgtccgt
tcgccatacatcgttatcccagaatatggaaatttagcaagaaaagggaatgtgctgatt
gtagacttgggtcatctaactgtcgtcagcgacttggtcgacagggacaaagttcccgtc
aaaaaaagatcagatgatgagcttgcggagatgttttatgataagtttgatgtgaaggtg
acagatgttcagctaatcttggctgaaaaagggtcagactggcactctcttcatgtgcaa
tcctccacgcctgaacacatccttcctgccacttgcatggagcttcaggcttacaagagc
atcagcgccgagtatcctgaattaccagaattcaaagcgatatcagttcttcctacttta
tggatcaagctgtcagacacaaaatacaaacaactaatgcagttcctcaagaatttccct
cttggcacacaaacgagaaaagaggtggaggcgaaaggaaaacctcttttagacaagcaa
tgggttcgcacggcctccactttatccgtggatgaagtcaccagcatccaagccatcctc
agtgagaagttacacccaaaatccgacggcgaagatgacgagtggttcgactcggttgag
tatcttccgggagataggcctgggagcagagcgtcacaggcgccagacagaacgtacttc
accggggagttcgccatacaccagcttcgtgtgaccctcgataaagcgaacaacaagcgt
gacaagccctacataagcctaaacatcacgaacctgaccacgactgtcaccgtgaacact
tgggacctgtccgtcaagacctccctggggtttatacaactgatcgacaattacttccaa
ggtgatgatggcaatgccctcgctgtgttgagctcgtctgggaatgatgactggatctca
gtcgattacgtccaggcagaccccaagggacccgagttctccaccaagttcgaaaatacc
cagcagtcagttcgcgtcaaattcagctctattcaactcacggccgtcaaggaagcgctg
gctgctttcgagatatttttacttgaacttcttgaaagcgatgatgttaagccacttaca
cctctgctgccaagcaagtttcaacccctcgagaccatagaggaaaacgaacagctagaa
acacgagccatagaaccagtcaatcgagaagtagtagacatagcgatcgaggcccacgtg
gaaaagatcagcatcaaaatggtgtccagacaaaagcttgtaggatgtgtgcatgtgaaa
ggtcttaaagtaaaaatcgagcaaaggggacccgagaccaaaatcgtgactatgcttaaa
gatcttggaattacaaatgcgatggtaggaactttctacccaaagattctttgcttggaa
gataacacagtattcgaatgtgagattacactatttgacaacaagagcaactctgtcaaa
gacccattggccgtggatgttctcatcgacctcaagattggcagattcaagtttgtgttc
ttgagtggtttcactgctcatatgcagagttttgtccaagccctgatcagccctgagacc
atgtcttacgcgcaaaacatcacgcagaacgccctaaagacaaaggctaaaagtcttcaa
gaacgtggcactaaacttggcctaagcatcaacgtccacgcgccaaagcttgtaatccct
ggacactcagggtcacgtgacatgctggtagctgatcttggcaaccttgaaattaacaac
gcgatagagaaaacccgtcatggtgttttgattgacaatatggaagtgacactcagctcg
tttgaagtgagatgcttctccgaggaagagaatgtgttcagtaatcacttggtggagcca
atcaggcttgatattgtggtgagaagaagacttgacccagccgcatcacacattccactc
attgaggtggatgccgttcttgagctactgcaggttaacctggccacacccgatttcaag
cttctaatgatggttattaacaggaacctgaccgaaggaatcaaagaagcctctgattcc
ctgcttagcccctcaccgagtgatgaacaagttgagagtgaacaaggagccggacggaga
tcccgaataggaagtgcgcttcaattggaaagccgtgaggcatcagcccacaatactgat
gacgagattagcctcaagtgtaactttaacgtgcacaaggtgttggtcaactctccccga
gtcgtggacggcagggcatgtcgctatctcattcttaatgttgataaacttgttagtacg
ctggctatcgatggctggactacaaacgttcatgcagacctcggcacgatacagcttatg
gaccattttaataaggatttaacaggggagccagtctgtattctctcgtcatccaaggaa
gaggaccttatcacactcgacttcaaaatggcggacccatcctgccctgaattcgaatca
gctcactgctccgtgc
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integrated database retrieval system
