Nematostella vectensis (starlet sea anemone): 5513915
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Entry
5513915 CDS
T01037
Name
(RefSeq) SR-related and CTD-associated factor 4
KO
K13167
SR-related and CTD-associated factor 4
Organism
nve
Nematostella vectensis (starlet sea anemone)
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nve03021
]
5513915
03041 Spliceosome [BR:
nve03041
]
5513915
Transcription machinery [BR:
nve03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
5513915
Spliceosome [BR:
nve03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
5513915
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
5513915
NCBI-ProteinID:
XP_001634097
UniProt:
A7S2N4
LinkDB
All DBs
Position
Unknown
AA seq
1417 aa
AA seq
DB search
MVDMEVVRQFNSELSTIYETKPPISKGKVASITRLAVKGIKYYKHVVQSVEKFAQKCRQE
YKVPALYIMDSIIRQSRHQFGPDKDVFGPRFLKSIHPTFQHIYKCPPEEQGRIVKVLNLW
QKNGIFPPEVIQPLINMASQSNQNANQVSIQPSTAGPAQPVQELPDVATSAMTQMPQQAA
AEVGQFPTMAGADPGSFISALQQQQLQQQQQQIELLRRQLEEQQHINQQQQQLLQRAPEN
EPLVQPQQHQQDPSSFHGTPQGVQQPGLSGAPEGQGEGDTPRFQLQPHVLAQIQALTGMN
IRLPTAQNSNEPHDQGMPAPQYSGQMPNTPSLLGAAPQVSGIPQQPEGVPGKLYQEGGMG
RGLLPTPGVPGQMVWDQQGLPGQPHPGQEDMAKKDPLDDFDYGDEQDDATRIAEQRRHLR
EEERRLSQTQENRDSKFRPESDDPSDKNQHRERSPGHRRRSQSPRRRSRSPGHRSRSPRR
GRDRDRDRGRDRRDRDRDRDRDRDRGRDRDRDKDKGHERPKDRDERDREKVKEAEPETKN
PHIPAVEKDALSVCSSTIWVGHLAKIVTQDTLQGIFEEHGTITSIDLIPPRGCAYIQMEK
REDSYRALDKLRNIKLYGNSVKLAWAPAKGVKDREYKEFFNVSIGVTYIPHDKLGASPDL
ESLGEGGWIDPESIPEHLKNPGEKPDAGIDGPSQTVVTLPPQIPTHLPPPGHPMFNPALM
PPQMMMRPPFTGIPPPNMTQQDGSNPPGWNVPPPFAPPGLPPGMKGQFPPQQGTSNPMFQ
PRQQTGIPPRSQEPAGVHQFQPRFGGAHRFDGPPRFEGAPRGPKGPSFDQDRQRFEGPGN
RRQEGQQGNNPEEDVHMEEGSPPQERGQGPFGAPEDRGRGPRDFRGMDGPRFRGPEGPQF
RGPDGPHFGGPDGPRFRGPEERGPGGQFRRQGPPRDEVQYGMPHRGMEGLTRQEFRPDFR
GPRYGAPRHMGPPPHWVQPGHMRGPHPMRFPGPPWQVGPPHDDRPNLVGGDMLPHGGPDH
GPGVPPDERPEAGGVDMKGEDFLRQQSEPKQNEPKDRQNELRDLQDEPRDRQNEPRDRVK
EEVRPNPEEKPPRDHEYSRERDREHSRDRDRDRRDRDRHTSDIMRDEPRDRDSKRGSRES
SRDRDRLRERDRESSRDRHDRERDRDRSRDRDRVRDRDRDRDRDRDRERVPDRERDRDRD
RNRRRGRDNRSQSSDSSGDRRNRFDPIKEDSRKTPPERQASSMEIPPNAGPTKVDIPSNA
PTPGGEVPLSSEPEEGEVVDGEILGNVAPNVNGHEEIGSLNVTQGSKDVTLNSVTQGSED
VTVNSGTYGSENVEDSSVTQGKEDVTLNSVTQNSEDVTVDSSTQGSKDVEHQQRELGKEP
FKGLDGLNCEVTEPVQKDITPVSSEENGARNTEEIST
NT seq
4254 nt
NT seq
+upstream
nt +downstream
nt
atggttgacatggaagtagtgagacagttcaatagcgagctgtccacgatttacgaaacc
aagccaccgatctctaaagggaaagtggcctctatcactcgactcgctgttaaaggaata
aagtattacaagcatgttgtacaaagtgttgagaagtttgcccaaaagtgtcgacaagag
tataaagtaccagcactttatattatggattcgatcattcgtcaatcacgacaccagttt
ggaccagataaggacgtctttgggccaagatttcttaagagtatacacccaacatttcag
cacatttataagtgccctccagaagaacaagggagaattgtgaaggtgctcaacttgtgg
cagaagaatggcatcttccctcctgaggtgatccagcctctaataaacatggcctcccag
agtaaccagaatgctaaccaagtttcaattcagccatccaccgctggacctgcccaacct
gtgcaggagctccctgacgtagccacatcagcgatgacccagatgccacagcaagcggcg
gcagaggtggggcagttcccaacaatggcaggggcggacccaggtagctttataagtgcg
cttcagcagcaacaactacagcagcagcagcaacagattgagctgctgcggcgacagctt
gaggaacaacagcacatcaatcagcagcagcaacaacttcttcagcgggcaccagagaat
gaaccactggtacaaccacagcagcatcaacaggatccctcttcattccacggcactccc
cagggcgtgcagcagccagggttgtcaggtgccccggaaggacagggagagggggacacg
ccccggttccagctgcagccccatgtgctggctcaaatacaggcacttacaggtatgaat
ataagactccccactgcacaaaatagcaacgaaccccatgaccaggggatgccagcacct
caatactcggggcagatgccgaacacacccagcctacttggggcagcaccgcaagtcagt
gggataccacaacagccagagggtgtgccaggaaaactgtaccaagaaggaggaatgggt
aggggacttctaccaacaccaggagttcctggacaaatggtatgggaccagcaaggacta
cctggtcagcctcatcctgggcaggaagacatggccaagaaggacccactagatgatttt
gactatggcgatgaacaagacgatgctaccaggattgctgagcagcgccggcatcttcga
gaagaggaaagacgtcttagtcaaacgcaagaaaacagagattccaagttccggccagaa
tctgatgatccctctgataagaatcagcatagagaaaggtcccctggtcacagaaggaga
tcccagtcacctaggaggcggagccgttcaccagggcacaggtcccgctctcctcgccga
ggtcgtgaccgggatagggacagagggcgggacagaagggatcgtgatcgtgacagagac
cgtgatcgtgacagaggtcgggatagggaccgtgataaagataaaggacatgaaaggcca
aaggatcgagatgagagggaccgagagaaggtgaaagaggcagagccagagacgaagaac
ccacatattcctgctgtggagaaggatgctctcagtgtttgcagttcaactatctgggtt
ggtcacctagccaagattgtgacccaagatacacttcagggaatatttgaagagcatggc
actatcacgtctattgatttgatacctccccgtgggtgtgcatatattcagatggaaaaa
agagaagattcctacagagccttggacaaactacgcaatatcaaactatatggaaactct
gtcaagttggcctgggctccagcgaaaggagttaaggaccgggaatataaagagttcttt
aatgtgagcataggagtcacctacatccctcatgataaactaggggcatcccccgacctt
gagagcctaggagaaggtggctggattgaccctgaaagtatccctgagcatctcaagaat
cctggagaaaagcctgatgcaggaattgatggccctagccaaactgttgtcaccctcccc
ccacaaataccaacacacctgcctccccctggtcatcctatgttcaacccggccttgatg
cctcctcagatgatgatgcgaccccccttcaccggcatccctcccccaaatatgacacag
caagatggcagtaaccctccggggtggaacgtcccacccccatttgccccacccggtctg
cctcctggaatgaagggtcagttcccccctcaacagggtaccagcaatcccatgtttcag
ccccgccaacagactgggatcccacccagatcacaggagcccgctggagttcatcagttc
caaccaaggtttgggggggctcacagattcgatggacccccgagatttgaaggtgctccc
aggggacccaagggcccctcattcgaccaagacaggcagaggtttgagggaccaggaaac
aggaggcaggaagggcaacaagggaacaacccagaggaagatgtgcacatggaggagggg
tccccaccccaagagagagggcaaggaccttttggggcacccgaagacagagggcgaggt
ccccgtgactttaggggcatggatggaccccgttttagaggccctgaaggtccccaattt
agaggccctgatgggcctcattttggaggtcccgatggaccacgttttagaggtcctgaa
gagaggggacctggagggcagttcagaaggcaaggtcctccaagggacgaagtgcaatat
ggcatgcctcataggggcatggagggtctgacccggcaagaatttaggcctgactttcga
ggaccacgttatggcgcccctcgtcatatgggcccacccccacattgggtacaacctggc
cacatgagggggccccacccaatgaggttccctggccctccctggcaggttggccctcca
catgatgatcggccaaatctagtgggtggggacatgctaccgcatgggggtcccgaccac
gggccaggtgtgccgccagatgagcgacctgaggcggggggtgtggatatgaagggggag
gattttttaaggcaacaaagtgaaccaaaacaaaacgaaccgaaagatcggcaaaacgaa
ctgagagatctgcaagacgaaccgagagatcgacaaaacgaaccgagagatcgagtgaag
gaggaagtacgaccaaatccagaggagaaaccgccaagagaccatgaatacagtagagaa
cgagatcgggaacacagtagagaccgtgaccgtgatcgcagggaccgcgaccgtcacact
agtgacataatgcgtgacgagccaagagatcgggactcaaaaagaggcagtagggaaagc
agtagggatcgtgatcggcttcgtgaacgtgatcgtgaaagctcgcgtgatcgtcatgac
cgggaacgtgaccgtgatcgaagtcgtgacagagatcgtgtcagggatagagaccgtgat
agggatagagaccgtgacagagagcgagtgcctgaccgtgagcgtgacagggatcgtgac
cgtaataggcggcgaggccgagataacagatcccagagctcagattctagtggtgatcgg
cggaatcgatttgaccccatcaaggaagattctcgaaaaactccgcctgagcgtcaggcc
tctagcatggagataccacccaatgctggaccaaccaaggtcgacatacctagcaatgcc
cctaccccgggtggggaagtacccttgtcgtcagagccggaagagggggaagtcgtcgat
ggagaaattcttggaaatgtagctccgaatgttaatggtcatgaagagattggtagtttg
aatgtaacgcaaggtagcaaagatgtcacgctaaatagtgtaacgcaaggtagcgaagat
gtcacggtaaatagcggtacgtatggtagtgagaatgtggaagatagcagtgtaacacaa
ggtaaggaagatgtcacgctaaacagtgtaacgcagaatagcgaagatgtcacggttgat
agttcaacgcaaggtagcaaagatgtcgaacaccaacagagagaacttggtaaagaacct
tttaagggtttggatggactgaattgcgaggtcacggagcccgtacaaaaagacataaca
cccgtgagtagcgaggaaaatggagcgaggaacactgaagaaattagcacgtga
DBGET
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