Nematostella vectensis (starlet sea anemone): 5514226
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Entry
5514226 CDS
T01037
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
nve
Nematostella vectensis (starlet sea anemone)
Pathway
nve03022
Basal transcription factors
nve03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
5514226
09124 Replication and repair
03420 Nucleotide excision repair
5514226
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nve03021
]
5514226
03400 DNA repair and recombination proteins [BR:
nve03400
]
5514226
Transcription machinery [BR:
nve03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
5514226
DNA repair and recombination proteins [BR:
nve03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
5514226
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
Zn_ribbon_GTF2H2
VWA
Motif
Other DBs
NCBI-GeneID:
5514226
NCBI-ProteinID:
XP_032239653
LinkDB
All DBs
Position
Unknown
AA seq
400 aa
AA seq
DB search
MADLGGPDDESGYRWLSQYEKTWEAIREDDEGSLQTLVDELVHRSKRQRVAARPGNVRLG
MMRHLYIIIDMSKAMEEADLKPNRLSCSAKLLENFITEYFDQNPISQLGLIITKNKRAEK
LSELSGNPKLHISTIQSACSKPCVGEPSLQNALVLAMQSLKHMPGHVSREVLVLMGSLTS
CDPGDITETVKSLKNMNVRCSIVGLAAEMRVCKQICSSTNGSYRVVLDERHFKDLLMEHV
IPPTATADTEASLIRMGFPQHLAKGPPSLCHCHMDNKNIKEFTTKGYFCPQCRSKYCDLP
VECKVCGLTLVSAPHLARSYQHLFPLQQYTEVNVPAQIPGQPPWTCQACQITLTEKTACS
CPECRHVFCLDCDIYIHESLHTCPGCTAHQVTVARQQPNS
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggcggatctcggaggaccagatgatgaatctggctatcgctggctaagtcaatatgag
aagacgtgggaagcaattcgggaagatgatgaaggctcactacaaacactggtggatgag
cttgttcacagaagcaaacggcaaagagtcgcagcaagaccagggaatgtcagacttgga
atgatgcggcatctttacataattattgacatgtctaaagcaatggaagaagcagacttg
aagccaaatcgcctttcctgctctgcgaagttattagaaaatttcataacagagtatttt
gaccagaatcctatatcacagctggggctcatcattactaagaataagagagcagaaaag
ctgtctgaactgagtggaaatccaaagcttcatatcagcactatccagtctgcctgtagc
aagccatgtgttggggaaccctcgctccaaaatgccctagtgctggcaatgcaatctttg
aagcatatgccaggtcatgttagcagggaggtacttgtgttgatggggagcctgacatcc
tgtgacccaggtgacatcactgagactgtcaagtccctgaaaaacatgaatgtaagatgt
tcaatagttggacttgctgcagagatgcgagtttgtaagcagatctgttcttcaacaaat
ggctcataccgcgtagtgctggatgaaaggcatttcaaggacctcttgatggaacatgtc
attccacctactgccacagcagatacagaagcatctcttatacgaatgggttttcctcaa
catctggccaaaggcccaccatctctttgccattgtcacatggataacaagaatattaag
gaattcacaactaaaggctacttttgtccccagtgtagaagcaaatactgcgatttacct
gttgaatgtaaagtttgtggcttaaccctcgtatcagcaccccatctcgcgcgctcatat
cagcacctcttcccactacaacagtacacagaagtcaacgtaccggcccagatcccagga
caaccgccttggacttgccaggcatgtcaaataacgctgacagagaaaacagcatgctcc
tgtcctgaatgccgtcacgtgttctgtctcgactgcgatatttacatccacgagtctctc
catacctgtccaggatgcaccgcgcatcaagtcacggttgctaggcaacaaccgaactcc
tga
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