Nematostella vectensis (starlet sea anemone): 5514344
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Entry
5514344 CDS
T01037
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
nve
Nematostella vectensis (starlet sea anemone)
Pathway
nve04140
Autophagy - animal
nve04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
5514344
04148 Efferocytosis
5514344
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nve04131
]
5514344
Membrane trafficking [BR:
nve04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
5514344
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
Clathrin
zf-RING_Vps41
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_HPS5
WD40
Beta-prop_EML_2
BrxB
zf_RING_Vps8_fungal
zf_RING_Vps8
WDR55
Beta-prop_RIG_2nd
Vps39_1
Beta-prop_WDR19_1st
zf-C3H2C3
TPR_GEMI5
Beta-prop_CAF1B_HIR1
zf-RING_5
Beta-prop_WDR90_POC16_2nd
zf-RING_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
5514344
NCBI-ProteinID:
XP_032239770
LinkDB
All DBs
Position
Unknown
AA seq
892 aa
AA seq
DB search
MNPHHAAREGPSKMADGKNDADSRKTDENEDDDSEGDEEEEEEEPKLKYERLGNAVNEIL
RKDECASCMAVHSKFLALGTHYGVVHVMDHLGNSIRSKEFPSHTTAVNQISIDEKGDYIA
SCSDDGRVVINGLYSSENNVQATFDSPIKSIALDPEFSTKTTKLYVTGGSKLTLTERGWF
RNKTTVLHEGEGAIRTIKWRATFIAWSNDVGVRVFDTSSKKVITYIKRDQGSPRPQLYRG
NLWWKDDVTLVIGWADNITICVVKTRDHEVRDLPSRYVEIVGKYKTEYYISGIASLGKEI
VILSYMTDIEAGDKRQAGELSAQRPQLRLLQCLSLNESEEMSADALSIRGYQHYRCDDYH
LAPLVEVIDSGSSHIKENVAEENLFYIVSPKDIVLAKPRDMDDHLTWLIEHGKFEEAMVA
VERHKKEVKKHSYQDIGRAFLKSLMDDGDYEQAARVCVKVLGEDKKLWEDEVYKFARKKQ
LKAIAPYIPRGNLRLSKAIYEMVLDDFLKTDSKKFQDLVKEWPADLYSVQTIIAAVQEQL
EAEPENIILLETLGEMYTYLKRYDKSLAIFLKLRHPDVFNLIHQHNLFKSVQENIVMLME
FDAERAVKMLIENVDKVPVEDVVRQLSKRNELLHLYLDSLYQKDPQAGMDFHELQVGLYA
EFNRSRLLPFLRSSNYYPLQKALADCEQRHLIAEMVFLHSRMGNIKQALHLIIEEEQDVD
QAIEFCKEQNDEELWEDLIKYSLDKPSFITCLLHNIGTHVDPIRLIKRIPQGMKIPGLRD
SLVKILQDYNLQISLREGCKKILVKDSVSLMNRLIKVQQRGACVDEDIVCQGCRGSVLAS
DSRRASDVIVFFCKHVYHRDCITLRGVGPFCQICTAHSQVKRMRSRLGTMYK
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atgaatccccatcatgcagcgcgagagggcccttccaaaatggcggacgggaagaatgac
gcagatagcagaaagacggatgagaatgaagatgacgactctgagggtgacgaggaagaa
gaagaggaggagcctaaactgaaatatgaaagacttggaaatgctgtcaatgagatactc
aggaaagatgagtgtgccagttgcatggctgtccattctaagtttcttgctcttggaaca
cactacggcgtagttcatgttatggaccacttgggaaacagtataagaagcaaggagttc
ccatcacacaccactgcagtgaaccagattagtattgatgagaagggggattatatagca
agctgctcagatgatggcagggttgtcatcaatggtctttacagctctgagaacaatgtg
caagcaacctttgacagtcccatcaaatcaattgctctagatccagaattctccaccaag
accacaaagttgtatgttacaggagggagcaagctgacattgactgaaagggggtggttc
aggaacaagaccactgttcttcacgaaggagaaggggccatcaggaccatcaagtggcgt
gctactttcatagcctggtcaaatgatgtgggagtgagagtgtttgacacaagttccaaa
aaagttatcacttacatcaagcgagaccaaggaagtcctcgcccccaactttatcgtggc
aacttatggtggaaagatgatgtgaccttggtaattggatgggcagacaatatcacgatt
tgtgttgtcaaaactcgggaccatgaagtgagggatcttccttcacgatatgtagaaatt
gttggcaagtacaagactgagtactacatcagtggaatagcctcacttggcaaagagatt
gtcatactctcctatatgacagatattgaggctggcgataaaaggcaagcgggtgagctc
tcagcgcagcggccacagctccgcctccttcagtgcctaagtctgaacgagagtgaagag
atgtcagcggacgccctctccataagaggataccagcactaccgctgtgatgattaccat
ctagcccctcttgttgaagttattgattctggctcatcccatatcaaggaaaatgttgca
gaagagaacttgttttacattgtcagtcccaaagacattgttttggctaagcccagagat
atggacgaccacttaacatggctgattgaacatggaaaatttgaagaggcaatggttgct
gttgagcgtcacaaaaaggaagtgaagaagcacagttaccaggatattgggcgtgccttc
ctcaagtctctgatggatgatggagactatgagcaggcagcaagggtgtgtgtcaaagta
ctaggggaggacaaaaagctttgggaagatgaagtgtacaagtttgctcgcaaaaagcag
cttaaggccatagctccctatataccacgagggaatcttcgactgagcaaagcaatatat
gagatggtgttagatgactttctcaagacagatagcaagaaatttcaagacttggtaaag
gaatggcctgcagatttatacagcgttcagacaattatagccgcggtccaggagcagcta
gaggctgagccagaaaacatcattctattggaaactttgggagaaatgtacacgtacctg
aaaagatatgataaaagcttggctatctttctgaagctacgccatccagatgtcttcaat
ttgattcatcaacacaaccttttcaaatccgtccaggaaaacatagtcatgctcatggaa
tttgacgcagagagagctgtaaagatgttgattgaaaatgtcgacaaagttccggtggag
gatgttgtgcgtcaacttagcaagcgcaatgagctactacacctgtatctggattctcta
taccagaaagaccctcaagcagggatggatttccatgaattgcaggttgggctgtacgca
gaattcaacagaagtcgtcttcttcctttccttcgtagcagtaactattatcctctgcaa
aaggcgttggcagactgtgaacagcgtcaccttattgctgagatggtctttctacacagc
cgaatggggaacatcaagcaagcgctgcatctcattatcgaggaggaacaggacgtcgat
caggcgatcgaattttgcaaagagcagaatgacgaagaattgtgggaagatttgatcaag
tattcgctcgacaagccatccttcatcacgtgtctactgcacaacatcgggacccacgtg
gatcctatcaggctcatcaagcgaattccacaaggaatgaagattccaggcctgcgagat
tcacttgtaaaaattttacaagattacaacttacagatctcattgagggagggatgcaaa
aaaattttagtcaaggacagcgtgtcactcatgaaccgcctcatcaaagtccagcaacgc
ggcgcatgtgtcgatgaggacattgtttgtcaaggttgccgtggatccgttcttgcgtct
gacagtcgaagggcgtccgatgtcatcgttttcttctgcaagcatgtgtaccacagagac
tgtataaccctgcggggcgtgggccctttctgtcaaatctgcacagcacacagccaggtg
aagaggatgcgaagtagacttgggaccatgtacaagtag
DBGET
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