KEGG   Nematostella vectensis (starlet sea anemone): 5514800
Entry
5514800           CDS       T01037                                 
Name
(RefSeq) splicing factor 3B subunit 1 isoform X1
  KO
K12828  splicing factor 3B subunit 1
Organism
nve  Nematostella vectensis (starlet sea anemone)
Pathway
nve03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nve00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    5514800
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:nve03041]
    5514800
   03036 Chromosome and associated proteins [BR:nve03036]
    5514800
Spliceosome [BR:nve03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    5514800
 Complex B
    5514800
 Complex C
   U2 SnRNP specific factors
    5514800
Chromosome and associated proteins [BR:nve03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    5514800
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT HEAT_EF3_N HEAT_ECM29 Htt_N-HEAT_1 HEAT_2 XMAP215_CLASP_TOG CEP104-like_TOG UNC45-central
Other DBs
NCBI-GeneID: 5514800
NCBI-ProteinID: XP_032240373
LinkDB
Position
Unknown
AA seq 1321 aa
MATLAKAPTTHEEIEKQIQELQARRTGKENRTRQTDDGERVGLGAAGRFDTDIYGTADKY
EGYVPSIAANEQEEDDDDYSTTLMQQAKRPTYTAPTAVLSDMTQGEQVDPFAEHRRATIA
EREDEYRARRRQMIISPPRLDPFADGGKTPDANQLKHMRTYKDVMQEHDLRRDQVEIVKQ
LQDKSKAGELKPVSTAAPQPKPERKRRRWDQQANAEETPVKKKSGWDQEATTPSLSRWDE
TPGRSKGSETPGAITPHRLGSETPGATPSTRIWEATPSHATPGQATPGHATPGGTTPGGA
SARRNRWDETPKTERGETPGHSTPGWAETPRTDRMGAETPGATPTPGSKRRSRWDETPAS
QMGGTTPMIGTSGVTPAGALAMQMHTPTPGQLVSMTPEQMQAYRWEREIDERNRVLSDDE
LNQLFPKEGYKILDPPPGYQPIRTPGRKLTATPTPMGGQGFYMQQEDRSAKLVEDQPPGN
LPYLKPDDVQYFDKLLVDVDEETLGPEELKERKIMKLLLKIKNGTPPMRKAALRQITDKA
REFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPFVHKILVVIEPLLI
DEDYYARVEGREIISNLAKAAGLATMISTMRPDIDNIDEYVRNTTARAFAVVASALGIPS
LLPFLKAVCRSKKSWQARHTGIKIVQQIAILMGCAILPHLRNLVEIIEHGLVDEQQKVRT
ITALALAALAEAATPYGIESFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEYAN
YYTREVMIILIREFQSPDEEMKKIVLKVVKQCCATDGVEAQYIKEDILPDFFKHFWQHRM
ALDRRNYRQLVDTTVELANKVGASEIINRVVDDLKDENEQYRKMVMETIEKIMGQLGSAD
IDSRLEEQLIDGILYAFQEQTQEDIVMLNGFGTVVNALSKRVKPYLPQICGTILWRLNNK
SAKVRQQAADLISRIAQVMMTCGEEKLLGHLGVVLYEYLGEEYPEVLGSILGALKAVVNV
IGMNKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEHVGAREWMRICFELL
ELLKAHKKAIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETC
SPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLV
HRQTACSAIKHMSLGVFGLGCEDALCHLLNYVWPNIFETSPHVINAVLEAVDGMRVALGP
ARVLQYCLQGIFHPARKVRDVYWKIYNNLYIGSQDSLVASYPTVPNDEKNTYVRNELNYF
L
NT seq 3966 nt   +upstreamnt  +downstreamnt
atggcgactttggccaaagctcctactacacacgaagagatcgagaaacagattcaagaa
ttacaagcgcggagaactggcaaagaaaaccgaactcgacaaacagacgacggtgaaagg
gttggtcttggtgctgcgggtagatttgacacagacatctatggcactgctgataaatat
gaaggttatgtaccatcaatcgcggccaatgagcaagaagaggatgacgatgactacagc
accacgcttatgcagcaagctaagcgcccaacatacaccgcacctacagcagtcctcagc
gacatgacacaaggcgaacaggtggatccttttgcagaacacagaagggcaactattgca
gagagagaggatgaatacagggctcgtcgccggcagatgattatatctcctccacgtctg
gatccctttgctgatggtgggaaaacccctgatgcaaaccaattaaaacacatgagaaca
tacaaggatgttatgcaggagcatgacttgcgtcgtgaccaggttgaaattgtaaaacag
cttcaggacaagagcaaagctggagaattgaaacctgtttctactgctgcacctcaaccg
aagccagagaggaagcgacgtcgctgggatcaacaggctaatgctgaggagactcctgta
aagaagaagtctggttgggatcaagaggctactaccccatccttgagtcgttgggatgag
acccctggacgctcaaagggttcagagacacctggggccatcactccacacagacttggg
tcagaaacccccggggctacaccaagcacaaggatttgggaagccacgcctagtcacgct
acacccggacaggctacacctgggcatgcaacacctgggggtaccacaccaggaggggca
tcagctagaagaaatcgctgggatgaaacacctaaaacagagcgtggagagacccctggg
cactcgacgccaggatgggcagagactcctcgcactgaccgcatgggcgcggagacccca
ggggccacacccactcctggtagtaaacggcgctctcgctgggatgagacacctgctagt
caaatgggcggtacgacacctatgattggcactagtggagtgacgcctgctggtgcactg
gccatgcaaatgcatacacctaccccaggtcagttagtatccatgactcctgagcagatg
caagcctacagatgggaaagagaaatagatgaaagaaacagagttctgagtgatgatgag
ctcaaccagcttttccctaaggagggttataagattcttgacccccctcctggctaccag
cctattaggacacctggtcgcaagctcactgccacgcccacaccaatgggtggacaagga
ttctacatgcagcaagaagacaggtctgcaaagctagtggaagaccagccaccgggtaat
ctaccatacttgaaaccagatgatgtgcaatactttgacaaattgttggttgatgttgat
gaggaaactctggggcctgaagagctcaaagaaagaaagataatgaaactcctgctgaag
attaaaaatggcaccccgcccatgcggaaggcagcccttcgtcagatcactgataaagcc
cgtgagtttggtgcaggacctctgttcaatcagatcctgccgcttctcatgtcacccacc
ctggaagaccaggaacgtcatttgctggtgaaagtcattgatcgcattctttacaaactt
gacgatctagttcgtccatttgtccataagattcttgtggtcattgagcctttgctcatt
gatgaagactactacgcccgtgttgaaggtcgtgaaatcatctccaatcttgcaaaggca
gcaggacttgctaccatgatttctacaatgagacctgacattgacaacattgatgaatat
gtccgtaacacaactgcaagggcctttgcagttgttgcctcagctcttggaattccctcc
ctgttgcctttcctgaaagctgtgtgccgcagcaaaaagtcatggcaggccagacatact
ggcatcaagatcgtgcagcagattgctatcctgatgggctgtgctatcctccctcacttg
agaaatcttgtggagatcattgaacacggtctagttgatgaacagcaaaaggtccgtact
atcactgccttggccttggcggcgttggcagaagctgccacgccctacggtatcgagtcc
tttgacagtgtgctcaaacccctgtggaaaggaatcagacaacacagaggaaagggtttg
gctgccttcttgaaggctattggctatttgatcccattgatggacgcagagtatgccaac
tactatactcgagaagtcatgatcattttgatccgagagttccagagtccagatgaagaa
atgaagaaaattgtgcttaaggttgtgaaacagtgttgcgcaacggatggtgtggaagca
cagtacatcaaggaagacattctccctgactttttcaagcatttttggcagcacaggatg
gcccttgatagacgaaattacagacagcttgttgacacgacagtggagttggctaacaag
gtcggagcatctgagataatcaaccgtgtggtagatgacttaaaagatgagaatgaacaa
taccgaaaaatggtgatggagacaatcgaaaagatcatggggcaattgggttcggcagat
attgactctaggcttgaggaacagcttattgatggcattctgtatgccttccaagaacag
acacaagaggacatcgtcatgttgaatggttttggcacggtagtgaacgctctcagcaag
cgggtcaaaccatacctacctcagatctgtggtaccatcctctggagacttaataacaag
tctgccaaggtccgacagcaggctgctgacttgatctcccgaattgcacaagtcatgatg
acatgtggagaggaaaagctgctaggtcaccttggtgtggtgttgtacgagtaccttggt
gaagagtaccctgaagttctgggaagcattcttggtgcactcaaggctgtggtaaatgtg
attggtatgaacaagatgacccctcccatcaaggaccttctgcccagactaacacccatc
ttgaagaacagacacgagaaagtccaggaaaactgcatcgacttggtgggtaggatagct
gatcgtggggctgaacatgttggtgctcgtgagtggatgcgcatttgctttgagctgctg
gaattgctcaaggcacacaagaaagctatccgcagagccactgtcaacacgtttggctac
atcgctaaggccattggaccacaagatgtcctggcaactctgctaaataatctaaaagtg
caggagcgccagaaccgtgtctgtaccactgtagctattgctatcgtggcagagacttgc
tcaccctttaccgttctgcccgcactaatgaacgagtatcgcgtgccagagttgaacgtt
cagaacggcgtgctcaagtcgttgtcgttcctgtttgagtatatcggcgagatgggcaag
gattatatttacgctgtcacgcccctcctggaggatgctcttatggatcgagatctggtt
caccgacaaacggcatgctccgccatcaagcacatgtccctgggtgtgtttgggttgggt
tgtgaggacgctctctgtcacttgctcaactacgtttggcccaacatcttcgagacatct
ccgcatgtgataaacgctgtgctggaggctgtcgatgggatgagggttgctctcggacct
gcccgtgtactgcagtactgcctacagggtattttccatcctgcaaggaaagtgcgagac
gtatactggaaaatctacaataacttatacattggatctcaggactccttggtggcctca
tatcccaccgtccctaacgatgagaagaatacatacgtgcgaaacgagctgaattacttc
ctctag

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