Nematostella vectensis (starlet sea anemone): 5515023
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Entry
5515023 CDS
T01037
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
nve
Nematostella vectensis (starlet sea anemone)
Pathway
nve03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
5515023
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nve03021
]
5515023
03036 Chromosome and associated proteins [BR:
nve03036
]
5515023
Transcription machinery [BR:
nve03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
5515023
Coactivators
SAGA/TFTC/STAGA complex
5515023
Chromosome and associated proteins [BR:
nve03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
5515023
STAGA complex
5515023
TFTC complex
5515023
SAGA complex
5515023
SLIK complex
5515023
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
TFIID_NTD2
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_IFT140_1st
WD40_RFWD3
Beta-prop_Nup120_160
WD40_like
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
5515023
NCBI-ProteinID:
XP_032240521
LinkDB
All DBs
Position
Unknown
AA seq
559 aa
AA seq
DB search
MNSHGKHLKSDTVPALLMNFLKKRKYADSEIAQTKEHASTQQKLEDVALRTAVNNECGIP
NILSLSVNHLDSSTFDEQFGNLKSFILDVNPAYRSELAKLLFPMFAVCYLELIAKGHLIS
AQNFFSKYSGDLALEHKEDIQHLQAITDSERLKSSDIAANFRRSKYVLRLSSKVFTYFMQ
YLRSSDRVLLLQLLSRNFSIEISNRKPGQSTNGDIGEEEVDDNTSHVKSAKDVKQTKISA
QKEDASLLALKNSIARIRGGPACLPSVCLYTFNNAYQGLSSVGISPDSTLICGGFEDSFI
QLWSLTPKKIVQPIGKMTDVSKIILSPDIIPENPRIETTSLGTVTLRGHSGPVYATCFGS
EGKILLSASEDTTVRLWSLHSYSNIVQYKGHNHPVWSLDLSAQSLYFATGSQDSSARLWN
TEYNYPLRVFAGHLQDVQGVKFHPNCTYLATGSSDRTCRLWDLQSGNCVRLFRGHKGSVL
VLAISPDGQHLLSAGDDRSIRVWDLAAGSLLKDGQVRNTTLSNSSSSSELLASFPTKNSS
IPCVQFSSSNVLAAGNSSL
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgaattcccatgggaagcatcttaagtctgatacagttccagccttactaatgaatttc
ctcaagaaaagaaaatacgcagattcagaaatcgcacagacgaaagagcatgcttcaaca
caacagaaactagaggatgtcgctctccgaactgcagtaaacaacgaatgtggtattcct
aacattttatcactaagtgtcaatcatttagattcctctaccttcgatgaacaatttgga
aacctaaagtcttttatactagacgtcaacccggcatataggagcgaacttgctaagtta
ttgtttcctatgtttgctgtttgttatcttgagttgattgcaaagggacatttaatttca
gctcagaacttcttttcgaagtacagtggtgatttggctttagaacacaaagaggacatt
caacatttacaagcaatcacggattccgagcgactaaaatctagtgatattgctgcgaat
tttcgccgaagcaaatacgtgttgagactgagcagtaaagtgttcacgtatttcatgcaa
tatttgagaagtagtgatcgagtcttgttgctacagcttttaagccggaatttctctatt
gagatctcaaacagaaaaccgggtcagagtactaatggtgatattggtgaggaggaagta
gacgacaacacgtcacatgtgaagtctgctaaggatgtaaaacaaactaagatatctgct
caaaaagaagatgccagtcttctagcattaaagaacagtattgcaagaatcaggggtggt
ccggcttgcctcccctctgtctgtctatatactttcaataatgcttatcaaggccttagc
tcagttggtatatcacctgattctaccctgatctgtggaggctttgaagactcattcata
caactatggagtttaacacccaagaaaattgtccaaccaattggcaaaatgacagatgtc
tccaagattatcctttctccagacattatcccagaaaatcctaggatagagacaacatcc
ctaggaacagtcactcttcgtggtcactctgggcctgtttatgctacttgctttggttct
gagggcaaaatactgttatcggcatcagaagatactacagttcggctgtggagcttgcat
tcatacagcaacatcgtacagtacaaaggtcacaaccacccggtctggagcctggatctt
agtgcccagtccctttactttgcaaccggctcccaggactcctcggcaaggctgtggaac
acggaatataactatcctctgagggttttcgccgggcaccttcaggatgttcagggtgtc
aagttccacccaaactgcacgtacctcgccaccggctcgagcgaccggacatgcaggctg
tgggacctgcagtccgggaactgcgtccgtctattccgcggacataagggctccgtctta
gttctcgccatctctccagacggccaacatctattatcggctggtgatgacaggagcata
cgagtgtgggatcttgccgctggcagcctgctcaaggacgggcaggtccgtaacacaacg
ctgagtaactcatcctcgtcttccgaattgctcgcatcctttcccaccaagaactcttct
atcccctgcgtgcagtttagctcaagtaacgtgctcgcagcgggcaacagtagcttataa
DBGET
integrated database retrieval system
