Nematostella vectensis (starlet sea anemone): 5515083
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Entry
5515083 CDS
T01037
Name
(RefSeq) probable ATP-dependent RNA helicase DHX34 isoform X1
KO
K20101
ATP-dependent RNA helicase DHX34 [EC:
5.6.2.6
]
Organism
nve
Nematostella vectensis (starlet sea anemone)
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nve03019
]
5515083
Enzymes [BR:
nve01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
5515083
Messenger RNA biogenesis [BR:
nve03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
5515083
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_DHX34
Helicase_C
OB_NTP_bind
DEAD
HA2_C
HA2_N
AAA_19
nSTAND3
AAA_22
zf_Tbcl
ResIII
AAA_16
PhoH
HVO_2753_ZBP
AAA_23
Motif
Other DBs
NCBI-GeneID:
5515083
NCBI-ProteinID:
XP_032240622
LinkDB
All DBs
Position
Unknown
AA seq
1164 aa
AA seq
DB search
MSKHSHSKRRHGRYKDDSSDEDDSPIDWSEHKHTLDHLFFRDNDYIKRGTEDYKDFWHFF
ERYESFQRKRSLSKKDVKKEPSNNVSQKLGLPVNYDKRYRVNVSVLSGDIAELVRPSHHK
GKLKEKEPKYRGLTEANIAEFRSVLLYYIDFCQKQKFNKLAKLKRDQTNLPISQFRQQIV
DAVKNHQVVIIAGDTGCGKSTQVPQYLLHAGFTEIACTQPRRIACISLAKRVGFETLNEY
GSEVAYQIRFEGSKTSATRILFLTEGLLLRQIASDPDLSRYNVVVVDEVHERHLHGDFLL
GMLRCIIEGRANLKLVLMSATINIDLFAGYFEGAPVIQVPGRLYPIQVQYQAPAAEKQKA
PTSRTERLDPSPYLKIMQLIDYKYPPTERGDLLIFLSGMSEISAVVDAAREYAQRTRRWI
VLPLHSSLSVDEQDKVFDVAPDGVRKCIVSTNIAETSITIDGIRFIADSGKVKEMSFDNK
AKMQRLQEFWISQASAEQRKGRAGRTGPGVCYRLYTQSDYHAFSEYATPEIQRAPLDSTV
LQMVAMGINDVRAFPFIEPPPRSSIENSVHFLQQQGALTEDEAITPVGQMLSRLPVDVVI
GKMLLMGSVFHVTDPVMIIAAGLSVQSPWTRRLDHDPDVMALRKELESDHGDPFTLLNAY
DEWIQVKSRQGSGSKKWCRRRGLEEQRFYEMSKLKRQFEDLLVDHGLIQRETKDDSDDDE
REREKYKRRQLKRLKREHQTSTRRRKLLKLEEDEEGVDDKETVPDIRDMEFKLTHDLDKL
EEERNTRRGFTLRDINLLKIILCSGLYPNLAIADDTNCWKRDTEQTFHTQSKSSLLLHPT
SVFATNPDVLKPPQDIGAPPSQEDVKSGKRLRDSLDLTYSTSHQLLAYVSLLETNKPYLV
NSMRVPGLQTLMLFARSLDTNADLTRVIADTWLEVRLPDAKTAQSAMSAVIQLRSTWMRL
LQLRLDAKRSGSETGLLEMNKCRDLERALAKKLSEFLDSNIRFSTRRLLPSEDQHLYKGL
MDSDDFDLTAEGILPFQGPSTPLEVHPTKGGIRVNEYLTYNCLMDEIQAEAASAAAEYIQ
KHWTCPKCGEKMIITVLERLRHENDCHETEGQESIATQESQDTKPSEFSKPDMAHLRREY
FCADCKKEFVFTSSEILKHKRSHR
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagcatagccatagtaaaagaagacatggtcgctacaaggacgactcatcagac
gaggatgattcccccatagactggtcggaacataagcacactcttgatcatttgttcttt
cgagataacgattacataaaaaggggaacagaagattacaaggatttttggcactttttc
gagcgttatgaatcatttcaacgaaagagaagtttgtcaaagaaagatgttaaaaaggaa
ccttctaataatgtctcgcaaaagcttgggcttccagttaactacgacaagcgatacagg
gtcaatgtgtcagttttgtcaggtgacatagcagagctggtgcgaccttcccatcacaaa
ggaaagctgaaggaaaaggagccaaagtacagaggtttgacagaagcaaacatagcagaa
ttcagatctgtactactttactacattgacttctgccaaaaacaaaagtttaacaagctt
gcaaagctaaagagagaccaaacaaacctccccatcagccagttcagacaacaaatagtg
gatgcagtcaagaatcatcaagtggtcatcattgctggcgacactgggtgtggcaagtcc
acccaggtccctcaatacctgcttcatgcaggctttacagagattgcctgtacccagcca
cgtcgaattgcttgcatatctctcgccaagagagttgggtttgagactttaaatgaatat
ggctcagaggtggcatatcagattcgttttgaagggagtaagacaagcgctacaagaatt
ctatttttaacagaaggtttgttgctacgtcaaattgcatctgatccagatctttctcgc
tacaatgtggtagtggtggatgaggtgcatgagagacatttgcatggtgacttcctactg
ggcatgcttcgctgcatcattgaaggcagggcaaacctcaaacttgtcctcatgtctgcc
actataaatatagacctgtttgctggatattttgagggagcaccagttatacaggtgcct
ggccggttgtacccgattcaggtgcaataccaggctcctgccgctgagaaacagaaagcg
ccgacaagtcggacggagagattggatccatctccgtatctgaagatcatgcaactcatc
gactacaaatacccacccacggagcgtggtgatctactgatcttcctgagtggcatgtcc
gaaatctcagcggtcgtggatgccgccagggagtatgcgcagaggacgcgccgctggata
gtgttaccgctgcacagctcgctgtctgtcgacgagcaggacaaggtgttcgatgttgcc
ccggatggcgttcggaaatgcatcgtgtcaacaaacatcgccgaaacctctattacaatc
gacggtatccgatttatagcagattcaggaaaggtaaaggaaatgagctttgataacaaa
gcaaaaatgcagcgcttgcaagagttctggatcagtcaagcgagtgctgaacagcgcaaa
gggcgtgctggtcgaacaggcccaggcgtttgctatcgactgtacacacagagcgactat
cacgccttctccgaatatgccactcccgagatacaacgcgccccgctagactcgacggtc
ttgcagatggttgccatgggaatcaatgacgtcagagcgttcccctttatcgagccaccg
cctcgttcgagtattgaaaattctgtgcacttcttgcaacaacaaggggccctgacggaa
gacgaagccatcacccctgttggccaaatgctctcacggctccctgtggatgtcgtaatc
ggtaagatgctgctgatgggctcggtgttccacgtgaccgatcccgtcatgattatcgcg
gcggggcttagtgtccagtccccttggacgcgtcgcctagaccatgacccggatgttatg
gcgttacgtaaggagctggaatctgatcatggagatccattcacgctacttaatgcatac
gacgagtggatccaggtgaaaagccgccaaggctcgggttccaagaaatggtgccggcgc
cgcggtctagaggaacagcggttttacgagatgtctaagctgaagcgtcagttcgaagac
ctgctggtagaccacgggctcattcagcgggagaccaaagatgactccgacgacgatgaa
cgagagcgagaaaaatacaaacgccgacagctgaaaagactcaagcgagaacaccaaaca
tcaacaaggcgtcgcaagctgctgaagctagaagaggacgaggagggtgttgatgataag
gagaccgtgcccgacatcagggacatggaatttaaactaacgcatgatcttgataagctt
gaggaagagaggaacacgcgaagggggttcactctcagggacatcaacctgcttaagatc
atcctttgtagcgggctctaccccaacttggcgatagcggacgataccaactgctggaag
cgtgacaccgagcagacgtttcacactcagtccaagtcgtctcttctacttcatcccacc
tcggtgtttgcgacgaacccggacgtactcaaacccccacaggatatcggggccccgccc
tctcaagaggacgtgaaatctggtaagagattgcgtgacagtttggacttgacgtacagc
acgtcacatcagctcttagcttacgtctccttactagagacaaacaagccttatttggtg
aactctatgcgggtcccaggtctacagacgttgatgctgttcgcgcgtagcctggacacg
aatgctgacttgacgcgtgtcattgccgacacgtggctagaagttcgacttccggatgcc
aagacagcacagagtgcaatgtctgctgtgatacagctacgttcgacatggatgcgactg
ttacagctcagacttgatgcgaagcgttcagggagcgagactggtctactggaaatgaac
aaatgcagagacctggaaagggctctcgccaagaagctttccgaatttttagatagcaat
attcgcttttccactcgccgattattaccttcagaggatcaacatctttacaaagggtta
atggactccgacgacttcgacctcacggctgagggtatcttacctttccagggtcccagt
acaccccttgaggtacaccctacaaaaggtggaatccgcgtaaacgaatacctgacttat
aattgtctaatggatgagattcaagcggaggctgcgtctgccgcggcggagtacatacag
aagcactggacgtgcccgaagtgcggcgagaagatgattatcacagtattagagagacta
cgtcacgagaacgactgtcatgagacagagggtcaggaatccatagcgacacaggaaagt
caggataccaagccaagcgagttctctaagccagatatggctcatcttcgcagggaatac
ttctgtgctgattgtaaaaaggagtttgtgttcaccagtagtgagattttgaagcacaag
agatcgcatcgttag
DBGET
integrated database retrieval system
