KEGG   Nematostella vectensis (starlet sea anemone): 5515224
Entry
5515224           CDS       T01037                                 
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
nve  Nematostella vectensis (starlet sea anemone)
Pathway
nve03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nve00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    5515224
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:nve03041]
    5515224
Spliceosome [BR:nve03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    5515224
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40_Prp19 WD40 Beta-prop_IFT122_1st Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_EML_2 Beta-prop_TEP1_2nd WD40_Gbeta WDR55 Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st DSE1_N ASA1 PRP4 ANAPC4_WD40 Beta-prop_EML NBCH_WD40 Beta-prop_WDR41 Beta-prop_TEP1_C Beta-prop_Vps41 Beta-prop_EIPR1 Beta-prop_Aladin CFAP251_N Beta-prop_NOL10_N Beta-prop_DCAF4 WDR90_beta-prop_4th Beta-prop_WDR19_1st WD_LRWD1 WD40_like Beta-prop_VPS8 Beta-prop_HPS5
Other DBs
NCBI-GeneID: 5515224
NCBI-ProteinID: XP_001635358
UniProt: A7RZ49
LinkDB
Position
Unknown
AA seq 513 aa
MSDDEDAPQAKRQRIHFGSLEEVEKNRLASQTTGKDGKEMDEVDRIISNAIMEGIQSGNI
NISEGEYLELSEDTTSERHQELLEQFERRKKARMITVPTDNAAVQARLRELGEPITLFGE
GPPERRDRLRKMLAELGDDALKQEEKEPPKTEEIVAEEVWYHEGPQELQVARTWIANYSL
PRADERLKKARISHARPETEKAAKTQELHRKLRSLNNSCSQIGDSRPLSYCQFSPDSKLL
ATASWSGLCKLWSVPDCEPVSTMKGHNERVCSIVFHPQARLSLDETTPSMASSGADGTVL
LWNFKSENPIANIEGHDKRVPRLAYHPSGRFLGTTCFDNSWRLWDLEQLKEVLHQEGHSR
EVYDIAFQCDGSMVATCGLDARGMVWDLRTGQCVMPLDGHLQKVLGIDFSPNGYHIATGS
EDQKVIVWDLRKRQAIYTIPAHTNLISSVKYYENYLISASYDCKVKVWSQPGWAPLKTLS
GHEQKVSCVDISPDGEYIASTSFDRTFKLWASE
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgtcggacgacgaggacgccccacaagccaaacggcaaagaattcacttcggcagtttg
gaagaagttgagaaaaaccggcttgcttcacaaacaacgggtaaagatggcaaagaaatg
gatgaagtagaccgcattatcagtaatgccataatggaagggatacaatcaggaaatatc
aatattagtgagggcgaatacctggagctttctgaggacacaacatcagaaaggcaccag
gaactacttgagcagtttgagcgcagaaaaaaggcacggatgataactgttccaactgac
aatgccgcagtacaggctcggctgcgggagttaggagagcccatcaccttgtttggtgag
gggcctccagagagaagggacaggttgagaaaaatgcttgctgagctaggtgatgatgct
ttgaagcaagaagagaaagaacctcccaagacagaggagattgtagcagaagaggtgtgg
taccacgagggaccgcaagagttgcaagttgcacggacatggattgcaaactactctcta
cccagagctgatgagagattaaagaaggcacgaatatcccatgcccgcccagaaacagaa
aaggctgccaagacgcaagaacttcaccgaaaacttaggagtttgaataattcctgcagt
caaataggtgacagtagacccctctcatactgtcagttctcaccggactcaaaacttctt
gcaacagcatcttggagtggactgtgtaagctttggtctgtcccagactgtgaaccagtt
tctacaatgaaaggccataatgagagggtctgctcaatagtctttcatccccaagccaga
ctgagtcttgacgagaccacgccttctatggcttccagtggggctgatgggacagttctg
ctttggaattttaaatctgagaaccctatagctaatatcgagggacacgacaagcgagta
ccacgactggcctaccacccctcaggacgattcctagggaccacatgttttgataattct
tggcgcctttgggacttagagcagttgaaagaagtgttgcaccaggaaggccactcaagg
gaggtatatgacatcgccttccagtgtgacggatctatggtagctacctgcggtttggat
gcgcgagggatggtgtgggacttgcgcactggtcaatgtgtcatgcctcttgacggtcac
ctgcagaaagtgcttggcatcgatttctcgccaaatgggtaccacatcgccacaggaagt
gaggaccagaaagtgattgtttgggacttgagaaagcggcaagcgatctacacaatacct
gcacatacgaatcttatatcgtctgtaaaatattacgaaaattacttgatatcagcatcc
tacgactgcaaagttaaggtgtggtcgcagcctggctgggctccccttaagaccctatct
ggacacgagcagaaggtatcctgcgtcgacatttcaccagacggagagtacatcgcatcc
acgtcgttcgacagaactttcaaactgtgggcgtcagagtag

DBGET integrated database retrieval system