Nematostella vectensis (starlet sea anemone): 5515749
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Entry
5515749 CDS
T01037
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPB
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
nve
Nematostella vectensis (starlet sea anemone)
Pathway
nve03022
Basal transcription factors
nve03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
5515749
09124 Replication and repair
03420 Nucleotide excision repair
5515749
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nve03021
]
5515749
03400 DNA repair and recombination proteins [BR:
nve03400
]
5515749
Enzymes [BR:
nve01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
5515749
Transcription machinery [BR:
nve03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
5515749
DNA repair and recombination proteins [BR:
nve03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
5515749
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
5515749
NCBI-ProteinID:
XP_032241433
LinkDB
All DBs
Position
Unknown
AA seq
796 aa
AA seq
DB search
MKGYKRRQDEGRSSSRKSKKAKTQSQVDSDEDFDEEETAEGDIVPKSSAAAVQETEAEDE
FGAKDYRKQIELKPDHASRPLWVAPDGHIFLESFSPVYKHAHDFLIAISEPVCRPEHVHE
YRLTAYSLYAAVSVGLQTNDIIEYLRRLSKTTIPDGIIQFIKMCTLSYGKVKLVLKRNQY
FVESSHADVLQALLRDSKIQQCRKRAAEEDEADPTGQKDVMVVPNVKKKSVLKFNTPSEA
NGESSQGPSSSQDKPGEKEVGIPTDISDYLEKIDQDEDEEEGQTFSFEVAQEQIEVLQRR
CIELDFPLLAEYDFKNDTLNPDLNMDLKPTTVLRPYQEKSLRKMFGNGRARSGVIVLPCG
AGKTLVGVTAACTVRKRCLVLCTSGVAVEQWKNQFKLWSTVNSRIICCFTSDAKDKPTDC
SIAISTYSMVSHMGKRSWEAEQVMSFLQSQEWGLMILDEVHTIPAKQFRRVLTVVQAHCK
LGLTATLVREDDKIQDLNFLIGPKLYEANWMELQNSGFIARVQCAEVWCPMTPEFYSEYL
NIKTRKRKLLYVMNPNKFRSCEFLIRYHERRNDKVIVFSDNVFALRNYAIKLQKPFIYGP
TSQGERISILQNFQHNPLVNTIFISKVGDNSFDLPEANVLIQISSHGGSRRQEAQRLGRI
LRAKKDMAAEEYNAFFYTLVSTDTEEMYYSSKRQRFLVNQGYSFKVITRLAGMEEENLNL
SSKKEQHELLQKVLAASDVDAEEEKTAADFGQKGGAVSRRVGSMASMSGADDMIYLEYKS
SKSKLARHPLFKKFRK
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggatacaagagaagacaagatgaaggccgttcatcatcgagaaagtctaagaaa
gccaaaacccaatctcaagtggattcagatgaagattttgatgaagaggaaacagcagaa
ggagatattgtcccaaagtcatccgctgcagctgtacaggagactgaagctgaagatgag
tttggagccaaagattacagaaaacagattgaattaaagcctgaccatgcctctagacct
ctctgggtggccccagatggacatatatttctggagtctttttcacctgtttacaagcat
gcccatgacttccttattgctatttctgagcctgtctgtcggcctgaacatgttcatgag
tacaggctgacagcatactcactttatgcggctgtgtcagtaggattacagacaaatgat
atcattgagtacctgagacggcttagcaaaaccactattccagatggcatcattcagttt
attaagatgtgcactttaagttatggcaaagtcaaacttgttctaaagcggaaccagtac
tttgtggaaagttctcatgctgatgttctgcaagctctactccgtgattcaaaaatccag
cagtgtagaaaaagagcagctgaggaagatgaggcagatcccacaggacagaaggatgtg
atggtagttcccaatgtcaagaaaaagtctgtgttaaagttcaacacaccttctgaggct
aatggggagtcaagtcaaggaccttcatcatcacaggacaaaccaggagaaaaagaagtg
gggattccaactgacatatcagattacctggaaaagattgaccaagatgaagatgaagaa
gagggtcaaacgttctcctttgaggtggcccaagaacagatcgaagtactccaaagaagg
tgcatagagctagacttccccctgcttgctgagtatgacttcaagaatgacaccctgaac
cctgacctcaatatggatttaaagccaactactgtccttcgaccataccaggaaaagagc
ctgaggaagatgtttgggaatgggcgagctcggtctggagtaattgtcctcccttgtggt
gctggtaaaaccttggtgggagtgacggccgcatgtactgtcaggaaaaggtgtcttgtt
ctatgcacttcgggggtggctgttgagcagtggaaaaatcagttcaagctgtggtcaact
gttaatagccggatcatttgctgttttacttcagatgccaaagataaaccaacagattgc
agcattgcgatttccacttactcgatggtatcccacatgggcaagcgttcatgggaagcc
gagcaggtgatgagtttcttgcagtctcaagaatggggattgatgattttagatgaagtt
cacacaattccagccaaacagtttagaagagttttgactgttgtccaggctcattgcaag
ctagggctgacggccacgcttgtccgagaggatgataagatacaggacttgaacttcctg
attggcccgaagttgtacgaagcgaactggatggagctgcaaaactcagggtttatcgct
agagtgcagtgtgcagaggtgtggtgcccaatgacgcccgagttctacagtgaatatcta
aatatcaagacgagaaagagaaagcttctttatgtcatgaatccgaataagtttcggtcg
tgcgagtttcttattcgctatcatgagcggcgcaatgacaaagtgatcgtcttttccgat
aacgtcttcgccttgaggaactacgccataaagctacaaaagcccttcatttatggcccc
acgtcccagggcgaacgtatcagtattctacagaactttcagcataacccactggtcaac
acaatattcatatccaaagtaggggataactcgtttgacctgccggaagcgaatgtccta
atccaaatatcttctcacggaggatcccgtcgacaggaagctcaaaggcttggtcgaatt
ctcagggcgaaaaaagatatggccgcggaagagtacaacgccttcttttacactctggta
tcaacggatacggaggaaatgtactactccagcaaacgccagagatttctagtcaaccaa
gggtacagcttcaaggtgatcacgaggttggctggaatggaagaggaaaacctcaaccta
tcgtctaaaaaagagcagcatgaacttctacagaaggtgcttgccgctagtgatgttgac
gccgaagaggagaagactgccgctgattttggacagaagggaggcgcagtgtcaagacga
gtgggatctatggcgtccatgtcgggggctgatgatatgatttatctggagtataaatcc
tccaagtccaagctggcaagacatccactcttcaagaagttcagaaaataa
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