Nematostella vectensis (starlet sea anemone): 5515855
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Entry
5515855 CDS
T01037
Name
(RefSeq) uncharacterized protein LOC5515855
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
nve
Nematostella vectensis (starlet sea anemone)
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nve03021
]
5515855
Transcription machinery [BR:
nve03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
5515855
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF1C_beta-prop
Rrn6_beta-prop
TAF1C_HB
Motif
Other DBs
NCBI-GeneID:
5515855
NCBI-ProteinID:
XP_001635955
UniProt:
A7RX21
LinkDB
All DBs
Position
Unknown
AA seq
856 aa
AA seq
DB search
MADDKDTRSAYKQSNEFPSYYFPFYRDGQQEQSFIEYGSSSSHNLNVNGRSGLILESKHR
RNGGRYYTALHATIPLMQPCQTSHLCKSFPEVEIKLNHRQDDFRSTLATQICNFAQDYPD
IQFTIAGALQDEFKNDNLQMYSTIFKSSKQEQVNELSEALSDIPSEVLFDLLNESVNEQK
NEKFYFDILQGNTLSYCSNWDPNTGVLFYPNGPTLETLNMSYVSFDKHDLNSNSCNSNQL
WKPSLRSSSKAFDVSGTIRQVNAVSIWNRIFVGTRSRYSCCMFEVSRPSDEDNEKVTLNP
VESIACQTTPSCIAVSPYIPAEAIIVMETGEAYLWRCNRSVEPIYIMPLAEKESHPWYQC
IYGPNPRCGLLANSLVADFVDFRVRPSSQNQLFSVTSSHLNVQERISAIQRHPSNAHYYL
LGTDQSLLLLDDRFVQHPALSWRHHLQDPVQFMDVTTDHTDTILMLSGSIHREVHCFRYS
SGNEVHCAVPLAGAVSTQPPSSSGLPWKVSSYDHWPLLLPASSRPLPLDLKNRLIEPLVG
SCIVPFSSTSNKGFVVIQMSACGDIFYQPFAGDTGSENAHRTLPEESIRRCEKWIGSVCQ
LIQKDPLSSDRNSEEVNSYNLFASMIDVKEPHLSCVLCRESSKLIHSAVSSDPADICPRC
GVCVNTGGLLKLSLRNNKVLRRAQTEECDKMDGKPSKTQVFDTFQDPLSRSLIFNWNEDI
PTPTDFGDTPDTEKDLESSRENQTDPATPQPEIPHSLDNDTVIHQGEASLDNQKEFLLPL
PTGAAVSRTLSQPVTGLLHSPLGGTPNPRPDSSDRDIFLGQQSPLRDETDLGPVLLKKTP
STSKKAKRNITNTMGF
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgacaaagataccagaagcgcgtacaaacaaagtaatgaatttccctcttat
tatttccctttttatcgcgatggacaacaagagcaatcattcatcgaatatggaagctct
tcaagtcataatcttaacgtgaatgggagatctggtttaattttagaatcaaaacatcgc
cgaaacggaggaaggtattacacagctctccatgcaacgatacctttgatgcaaccgtgc
cagacatcacatctttgcaagtcttttccagaggtggagattaaattaaatcatcgacag
gatgattttcgatcgacactagcaacgcaaatatgcaactttgcacaagattaccccgac
atacagttcacaattgcaggggctttacaagatgagttcaaaaacgacaatcttcaaatg
tattctacaatcttcaaatcatccaagcaggaacaagtaaacgaactctctgaagcgctt
tctgatattccctcagaagtgttatttgatttactgaacgagagtgtgaatgaacaaaaa
aatgaaaaattctattttgatattcttcagggaaacaccttgtcgtattgctcaaattgg
gaccctaacactggcgttttgttctatcctaacgggcctacacttgaaacactaaacatg
agctatgttagctttgataaacacgatttgaactcaaatagttgcaatagtaaccaatta
tggaagccaagtctaagatcaagtagcaaggcatttgatgtgagcggaacaataagacaa
gttaatgcagtgtcaatctggaacagaatatttgttggtacaagaagccgctacagctgt
tgtatgtttgaagtttctagaccatcagatgaggataacgaaaaagttaccctaaatcct
gttgaaagcattgcatgccaaacaaccccatcatgcattgctgtgagtccatatatccca
gctgaggctattattgtcatggaaacaggagaggcttatttgtggaggtgcaataggtct
gttgaacctatatacatcatgcctctagcagaaaaagaaagccatccatggtatcagtgc
atatatggaccaaatccaagatgtgggctgctggcaaattcacttgtagcagattttgtt
gattttagggtgaggccatcttcacaaaaccaactattttctgttacctcaagccactta
aatgtccaagagcgcatatctgcaattcagcgacacccaagcaatgcccactattatctg
ctaggaacagatcagtcgctgttactcttggacgacagatttgtccagcaccctgcctta
agctggcgtcaccatctacaggatcctgtccagttcatggatgttacaactgatcacaca
gacaccattctgatgttatcaggatctatccatcgagaggtgcactgttttagatacagc
agcgggaatgaggttcattgcgctgtaccactggcaggggctgtctccactcagccacct
tcctcatcaggcttaccatggaaggtatcatcatatgaccattggccattacttctccct
gcatcatccagaccgctaccgttagacctaaagaaccgcttgatagagcctctagtcggg
tcttgcattgtcccattttccagcaccagcaataaaggctttgtcgttattcaaatgtca
gcgtgcggtgacatcttctatcaaccatttgctggagacacaggatccgaaaacgctcac
agaactcttcccgaagaaagcatacgtagatgtgaaaaatggataggctctgtgtgccaa
ctgatacagaaagatcctctgtcttcagatagaaattctgaagaggttaattcttataat
ttgtttgcgtcaatgattgacgtgaaggagcctcatttatcatgtgtcctttgtagagag
tccagcaaattgattcatagcgccgtaagttcggatcctgctgacatctgcccgagatgc
ggggtttgtgtcaacactggcggactgttgaaactctctttgagaaataacaaggtttta
cgaagagcacaaacggaagagtgtgacaaaatggatggtaaaccatcaaagacgcaggta
tttgatacatttcaagaccctttaagtagaagtctgatttttaactggaacgaggacatc
ccgacacctacagacttcggagataccccggacacagagaaggatctagaaagttctcgt
gagaatcagacagatcccgcaacaccacaaccagaaataccgcatagtttagacaatgat
accgtgattcatcaaggagaagcatcactagataaccaaaaagaatttctgctacccctc
cctactggtgctgcagtatctcggactttgtcccagcctgttacaggtttgttgcactca
cctttgggaggcacaccaaaccctcgtccggacagttcggaccgtgacatatttctcggt
cagcagagccctttacgagatgaaacagatctaggtccagtcttgctaaaaaaaacacct
tcaacatctaaaaaagctaaaaggaacattaccaacactatggggttttga
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