Nematostella vectensis (starlet sea anemone): 5516487
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Entry
5516487 CDS
T01037
Name
(RefSeq) transcriptional regulator ATRX isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
nve
Nematostella vectensis (starlet sea anemone)
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nve03000
]
5516487
03036 Chromosome and associated proteins [BR:
nve03036
]
5516487
Transcription factors [BR:
nve03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
5516487
Chromosome and associated proteins [BR:
nve03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
5516487
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ADD_ATRX
Motif
Other DBs
NCBI-GeneID:
5516487
NCBI-ProteinID:
XP_032242209
LinkDB
All DBs
Position
Unknown
AA seq
2134 aa
AA seq
DB search
MSEPVPGKPKGRKKLDSIISKLRLKPAEACDSEEESGPVQSKGGLEEVIDSGGEALDSGE
ELTIRHRSKRKSGKTVHYQRLVINDDDDDDDGVEEHALDDLPPPELPLEDAGSIEDTNIT
AEEVPPYDNIADLLSDGPRLVEEDETVVLIVPPGSIKVQAAAVEGDELRDLSEIEEEHEE
HKPKKEKRDKKKKDKKKKKEYSEEQVEGAASAAESNEEGEKEKEKKKSKKKKKVADSDVS
MDEDGLPKRVTCTACGRHINPSHGKILRHPTLNVLVCKKCNQYYNSGPFTRDEYGIEEQC
RWCGDGGALICCDKCEKAFCQPCIKRNCGKAYLKEVMNAPDDYHWNCFSCKLNNPLPAVA
QLQKRCNYVMDILDSLRSRKAPFKSKIGQPNVISGPTPLERRSQLNTLSGTLGIKVEGWL
SSPEKSPTKKEFSKVVEPPPLLFDDSEAGPSNAKQDEKGKEKKADKRSDEPQDKEDKTTG
NEKERPGRMIVRLDEVSCKTKKQKEQDTDGKSSDEDGEGIDEPNLLERISEMSRTEEGKL
SERTENEGKISEGEEKNEGAGSSTSKTSRMLRSKSKVISEITKEAGSDSGSSSSRKETRR
SKKKNNESRSSDTKEVSRHGKTDKKNNDKKDDESSRKDKVQEEDDDVDDDQPNEMVKQES
GLDSKDESEEVEERRTTRSGKTNRSGKDSQSKLTTQSSAKKNTEEVSKSSKKQEVIILDD
DYSSSEEPVTKRTTRSERKRNELVKKEVLSGNDSESSLEKQNKKGTQKGKKGKQAKTSPE
SDSSESSDDENRISTLKVRFGFAKGARSSRSKHSNSDSTSKNRKKPVKMEKVSENDESDS
DLVSKKQSGNNLSENKKTTPLNTKYDSKSESGDSDFVSKKQSKKNATSKNNNKTPVKPEG
SSGSEESDSNSKTKPSNKKSSVKKNKKMEQSESGESSDSGPKRRKGNSQKRMVNQKSTRK
RPRPASSDSSSAESPEQSSEESSESSEEESARKQRLRRRQRLEDSDDSDGEDTKTKKSKI
QKQKKTPKRRRTRANKGKSSSEEPSESESEESSDDSEVKKRPKRNAKRNQKKGKMAKGKR
KRVKEMSESEDENEEEPDTPSKSKGRRKIRKLLTDEKLGEETKKARRLEEERRQRLLERT
QNLSEDMPSMDWKVDSLVLESDPETKEPIVEVNKHIVKYLKPHQCKGVQFMYDCLVESVK
AYKKGEPGSGCILAHCMGLGKTLQVVTLVHTLFNNKELEFTTALVVAPLNTLLNWQVEFE
KWLSVDDRMEVYVLQEVGHNSWRRADMLTQWQRYGGIMIMGYDMYRNLSLCNNVRSKKVK
KIFKETLVDPGPDIVICDEGHILKNDASAISRALNAIKTRRRVVLTGTPLQNNLIEYHCM
VSFVKPSLLGTRKEFMNTFGNPIQNGQCADSTPSDFRIMKQRCHVLFKMLEGCVQRRDYS
VLTPFLPAKHEYVIKVRLSEAQRKLYEHYLKTFVFPEGDVTKRGVGLFSDYQALMRIWTH
PWCLKLEAIRRSMRMTYDDSDDSLDGFVVHTDEESESTAESESEEDTDANKGRGKSRRKE
FDTSSEEEQSDEDESSSGDEVIPEKRASGTARKTRNSLQTTRSSKPSKVEIDGEDVVEVD
AKPGPSGVELNGDPALGNTRSGQNFKDDEVEAETEWYDEFLTQEAEYNVELSGKLVLLLE
ILADAEAVEEKVLVFSQSLVSLDLIERALGGGEVGGDRENWCKGCDYFRMDGSTSVQLRQ
RWADIFNDPDNKTARLFLISTKAGGLGINLVAANRVIVFDASWNPSHDVQSIFRVYRFGQ
TKAVYVYRFLSQGTMEERVYDRQVAKLSISERVVDKHQIERHFTAADLAELYKFDPDVLD
ETKNKEDIPSLPLPKDAILADLINRMHPQWIVKYHEHDSLLRNIEEEELTEEEMKIAWKA
YQDEKEAANNPAYARQLEYERYQEQQRLYQQQAQQIAQQQPGSSRQVPLDPVVLQQIQRI
QQQQADRQRRFQEEMQRISQERQRFLQQQSSLQDQQFSWQQQQLRQLEQQMPRGPADAAR
TEQMRRQILDRMGTHVPIHAPPQVATGAASQHPMVRFISQQQAQNLVGTGTPGTRLIGVN
APTPQANGPSLHSIVSQGRSIIPQTNGMRPVSRP
NT seq
6405 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaccagttcctggtaaaccgaaaggtaggaagaaactcgactcaatcatctcc
aagctgcgactgaagcctgcagaagcctgtgactccgaggaagaaagcggccctgtgcaa
tcaaagggcggcttggaggaagtgattgacagtggtggagaagcacttgatagtggggag
gagcttactataagacacaggtctaaaagaaaatctggaaaaaccgtccactatcaaaga
cttgtgataaatgatgatgatgatgatgatgatggtgtggaagaacatgctttagatgac
ctcccaccgccagaactaccactggaagatgctggttcgattgaggacaccaatatcact
gccgaggaggtgcctccctatgacaacattgctgaccttttgagtgatggccccaggctg
gttgaagaagatgagactgtggttctcatagtccctccaggaagcataaaagtccaagcc
gcagcggtagagggtgatgagttaagggatttatcagagattgaagaagaacatgaggaa
cacaagccgaagaaggagaagagagataaaaagaagaaagacaagaaaaagaagaaagaa
tactctgaggagcaagtagagggtgcagcatctgctgcagaaagcaatgaagaaggtgag
aaagagaaagaaaagaaaaaaagcaaaaagaagaaaaaggtggctgactctgatgtatcc
atggacgaggatggtctccccaaacgagtaacatgtacagcatgtgggcggcatattaac
ccgtcacatggcaagattctacgtcacccaacccttaatgtactggtttgtaagaaatgc
aaccagtactacaactctggtccattcactcgtgatgagtatgggattgaggagcagtgt
cgctggtgtggcgatggaggagctctcatatgttgtgataaatgtgaaaaggcgttttgt
cagccttgcattaagcggaactgcggtaaagcctaccttaaggaggttatgaatgcccca
gacgactaccactggaattgtttctcctgtaagctaaataacccacttcctgctgttgcc
cagctccaaaagcgatgtaactatgttatggatattcttgatagtttgaggtcaaggaaa
gctccatttaagagcaagataggccagccaaatgtcataagtggaccaaccccgcttgaa
agaaggagccagttgaatacattgagcggcactcttggaattaaagtcgaagggtggttg
tcatcccctgagaagagcccaacaaaaaaagagttctcaaaagtggttgaacctccacca
ttgttatttgatgattcggaggctggtccaagtaatgcaaagcaggatgagaaaggtaag
gagaaaaaagctgataaaagaagtgatgaacctcaggataaagaggacaaaacaacaggc
aatgagaaggagaggcctggtcgcatgattgtcaggttggatgaggtttcttgcaagact
aagaaacaaaaagaacaggacactgatggaaaaagcagtgatgaggatggagaaggtatt
gatgaaccaaatttgcttgagagaatcagtgagatgtcaagaactgaggagggaaagttg
tcagagaggacagaaaatgagggtaagataagtgaaggtgaggagaaaaatgagggtgca
ggttcatcaacaagtaagacgagcaggatgcttcgctctaagagcaaggttatcagtgaa
attactaaggaggcaggtagtgactctgggtcaagcagtagcagaaaagagactagaaga
tcaaagaagaaaaataatgagtcaagatcctctgatacaaaggaggtcagtcggcatggg
aaaacagacaaaaagaacaatgataaaaaagatgatgaatcgtctaggaaagataaagta
caagaagaagatgatgatgttgacgatgaccaaccaaatgaaatggtaaagcaagagtct
gggcttgattctaaggatgagtcggaggaagtggaagagaggagaacaacaagaagtggc
aaaacaaataggagtggcaaagatagtcaaagcaagctcacgactcaaagcagtgctaag
aagaacacggaggaggtgagtaaaagcagcaaaaagcaagaagttattattcttgatgat
gattattcttcaagtgaagagccagttacaaagagaacaaccagaagtgagagaaaaaga
aatgaactggtcaaaaaagaagtattaagcgggaatgatagtgaatcatctttggaaaag
caaaacaaaaaaggaacccaaaagggtaaaaaaggaaaacaagcaaaaacttcccctgaa
agtgacagttcagagagttcagatgatgaaaatagaatctccactctgaaagttcggttt
ggatttgcaaaaggtgctcgatcttcaagatctaaacattctaattctgattctacatca
aagaatagaaagaaaccagttaagatggagaaagtcagtgagaatgatgagtcagacagt
gatttggtttccaaaaaacaatcaggtaacaatttatctgaaaacaagaagacaactcca
ctgaatactaagtatgacagcaaaagtgagtcaggggacagtgattttgtttcaaagaaa
cagtcaaagaaaaatgctacttctaagaacaataataagactcctgtaaaacctgaggga
agtagtggaagtgaagagtctgatagtaattctaaaactaagccttcaaataagaaatct
tctgtaaaaaagaacaaaaagatggaacagtcagagtcaggagaaagcagtgatagtggt
cccaagaggaggaaaggaaactcacagaaacggatggtcaaccagaaaagcacaagaaaa
agacctagacctgctagcagtgattcatcttcagctgaatcgcctgaacagtcatcagaa
gaatcttctgagtcgagtgaagaagagagtgcaaggaaacagaggctacgaagaagacaa
agacttgaggattcagacgactcagatggcgaagatacaaaaacaaagaagtccaaaatt
caaaaacaaaagaaaacacccaaacggagacggacaagggcaaataagggaaaaagctcc
tcggaggagccaagtgagtcagagagtgaagagagctctgatgattcagaggtaaaaaag
agacctaaacgaaacgcaaagaggaaccagaaaaaggggaagatggcaaagggaaaaaga
aagcgcgtgaaagaaatgtcggaatctgaggatgaaaacgaggaagaaccagacactccg
tcaaaatctaaaggtagacggaagatcaggaagcttcttacagatgaaaagctaggggaa
gagaccaagaaagcaagacgacttgaggaagagaggcgccagagactgctcgagaggaca
caaaacctttctgaagacatgccaagtatggactggaaggttgactccttggtactggag
tctgacccggaaacaaaggagcctatcgtggaggtgaataagcacattgtcaagtaccta
aagccccatcagtgcaagggggtgcagttcatgtacgactgcttggtggagtcggtgaaa
gcatacaagaagggtgagcccggcagtggctgcatccttgctcactgcatgggactcggg
aaaactctgcaggtggtgacccttgttcacacgctgttcaacaataaggaactggagttc
accactgcattagttgtggcaccacttaacacccttctcaactggcaggtggagtttgag
aaatggctaagtgtggatgacaggatggaggtttatgtgctccaggaggtgggacataac
agctggcggcgcgctgacatgctaacccaatggcagagatatggtggtattatgatcatg
gggtatgacatgtatcgcaacctctccctctgtaacaacgtacgcagcaagaaggtcaag
aagatcttcaaagagactctagtggatccaggtcctgatattgtgatatgcgatgaaggg
cacatattaaagaatgacgcgtctgccatctctagggctctaaatgccattaagacaaga
agacgagttgtactgactgggacaccattgcagaacaacctcattgaatatcactgcatg
gtgagcttcgtcaagccgagcctgctcggaacaagaaaagagttcatgaatacgtttggc
aaccctattcaaaatggccagtgtgcagactcaacccccagtgatttcagaatcatgaag
cagaggtgtcatgtgctattcaagatgctggagggatgtgttcagaggcgggattattcg
gtgttaacaccgttcttgccggctaagcatgagtatgttatcaaagtaagactgagtgag
gcccaacgaaagctgtatgagcactacctcaaaacgttcgtcttcccagagggggatgtt
acaaagagaggtgtgggtcttttctctgattaccaagctctaatgcgtatatggacgcat
ccatggtgcctgaagctggaggccattcggcggtcaatgcgtatgacatatgatgactcg
gacgacagtcttgatggctttgttgtacacacggatgaggagagtgagtcgactgcagag
agtgagtctgaggaggacacggatgctaacaagggcagagggaagagtagaaggaaagag
tttgacacgagttctgaggaggagcaatccgatgaggatgaaagcagtagtggagatgaa
gtgatccctgagaaaagggcgtctggtacggcacgcaaaactcgtaacagcctccagacc
acacgctcttccaagcctagtaaggtcgagattgacggggaggatgtggtagaggtggat
gcaaagcctgggccgagtggtgttgagttaaatggcgacccagctctcggaaacacgcgt
tcaggccagaacttcaaggacgacgaggttgaagcagaaacggaatggtatgatgagttc
ctgacacaagaggctgagtataacgtcgagctgagtggcaagctcgtcctcctgctagag
atcctggcagatgcagaggctgtcgaggagaaagtcctggtcttcagccaaagcctggtt
tcccttgatcttattgagcgtgccttagggggcggagaagtgggcggtgaccgtgagaac
tggtgcaaagggtgtgactactttcgtatggatggctctacaagtgtccagttaagacag
agatgggcagacatttttaacgaccctgacaacaagactgcacgtctgttcctgatctcg
accaaggcaggaggactgggcatcaatctagttgctgctaaccgagtgatagtgtttgat
gcatcctggaatccttcacacgatgtccaatccatattcagggtgtacagattcgggcag
acgaaggctgtctacgtatacaggtttctctcacagggtacaatggaggagcgtgtgtac
gacagacaggtggccaagctgtcgatctccgagcgcgtggtcgacaagcatcagatagag
cgccacttcacagctgctgaccttgctgagttgtacaagttcgaccccgacgtgctggat
gagacaaagaacaaagaggacatccctagcctgcccctacccaaggacgccatcttagca
gacctcattaataggatgcacccacagtggatcgtaaagtaccacgagcatgactcattg
ctgcggaacattgaggaggaggagcttactgaagaggaaatgaagattgcctggaaggcc
taccaggacgagaaggaagctgccaacaaccccgcatatgcaagacagctggaatacgaa
cgataccaagaacaacaacgactgtaccaacaacaagcccaacagatagctcaacagcag
ccaggcagctcgagacaagtcccgttagacccagtggtcttgcaacagatccaaagaata
caacagcagcaggctgacagacaacgacgcttccaagaggagatgcagcgcatttcacaa
gaaagacaacgattcttacagcagcaatccagtctgcaagatcagcagttctcctggcag
caacaacagcttcgccaactagagcagcagatgccaagagggccagccgatgcagcacgg
acagaacagatgaggcgtcaaattttggacagaatgggcacccatgttcccatccatgcc
ccgcctcaggtcgcaacaggggcagcctctcaacatccgatggtgagatttatctcacaa
caacaggcacagaatttggtaggcactggaacaccgggaacaaggcttattggagtgaat
gcacccacaccacaggccaacggtcctagtttgcatagcatcgtaagccagggaaggtcg
ataatccctcagaccaatggaatgcgtccagtttcacgcccatag
DBGET
integrated database retrieval system
