Nematostella vectensis (starlet sea anemone): 5516839
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Entry
5516839 CDS
T01037
Name
(RefSeq) CLIP-associating protein 1-A isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
nve
Nematostella vectensis (starlet sea anemone)
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nve03036
]
5516839
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
nve04812
]
5516839
Chromosome and associated proteins [BR:
nve03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
5516839
Cytoskeleton proteins [BR:
nve04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
5516839
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
HEAT_EF3_N
CEP104-like_TOG
HEAT
TOR1L1_N
HEAT_2
PDS5
HEAT_DAAF5
HEAT_EZ
Cnd1
MMS19_C
MMS19_N
Adaptin_N
FANCI_S3
Motif
Other DBs
NCBI-GeneID:
5516839
NCBI-ProteinID:
XP_032242651
LinkDB
All DBs
Position
Unknown
AA seq
1568 aa
AA seq
DB search
MRDNPFLDEILSAVWSQDTQKRLRAAEDLSNYLNDPSNDIVFHGYERLIDGLVGWVNSSN
FRVSLSGLEILHQIVDQMGERFKHSLLPVVPAIIERLGDSKQQVRQQAQELIQKFMYPVS
TPQHVLEQLIPAFNHKAWRVREEVLVCIVNAINIFGSSSLTISKFVPHICKLLGDPNSQV
RERAIDTLVEIYRHVGEKVRIDLSKKGIPSSRLSVIYAKFDQVARSGNMALNENDGPSKV
NGEVETDGSKISSGPSRASSGRKTSSGRKISGTRTPGVGSKESAAAGAVDEVDFANAFQE
CPEARIHSGKDLNDEMAKIQTILSDDKNDWEQRVAALKKVRSLALAGGLEYDNFILLIRL
MEGAFKLSAKDLRSTVIRETCVTLGFLSTELKNQFDHTAEAVLPALINLIPNSAKIMATS
GIACISIILKNTHARRLVPIITSNLSSKSSVIRRQCMTYLVLILEKWETQSLKSNVSEIE
EAIRKGISDADSEARASARRAFWVFHDHFRDKAESLLKSLDASKQKQLENDRNGGGASTR
KTSTNRAPVRQAKSASTARSRTPSTQSYHSEDGSSSRYGVPSRQTVGAASGASRTNHSQG
SRHAVASRAQTNSSGYLSPMGYGRSLSNIDSRAAERANMRAKARAAAAARAPSPQSRSSR
STFASRGYVSQPTSRSHSPERLLATFPPKERTEAYVHGVSPTKTRIPTPSFRLNRHSSYE
FLPPSSPVDLCRYSTTTPSSPRLLSRNISRPSSRTSSRSSSRGPSRDPSPETLRRERRLS
EGKGYSPTSLPMLKRTTHLHNPPLSRSHQQSSIDDDDPSLTEAALWDSWSRSSPVRRKYS
FGSSSQCSDDDNDSDAGSLCSDRSMGSRGNRTLGRAEPGNEVAEIVRLCHNNNSSTDRRD
GISGLLAFLKSSRVMSDVELSKIKDCLTRLFCDPNNKVYSAFLDALCEFIVVHKVDLNDW
LFVLLSRLLIKLGTDILGSMQSKIVRVLDVIRDSFPYDLQFSILTRFITDQTQTPNLKVK
IAVLQYLQGLISLMDPSDFTNSGETRLAVSRIISWTTEPKSADVRKESAAVIVALFELNT
PEFSMMLSVLPKSFQDGATKLLHSHLKSSTQSPEAAPSSRGSTSSQGYSTAYDETDNAST
TSERPKLRLGYRSMSSSSLKAESGKAEHPDEETAAVHSPEIRHTLDHHSKIPTHRATAQS
PRGQTKVGVSPRGHLHRDNSGEGEGSTDSLDSRHGSPFGLRSHGSQHEDAPSVSSGYNSD
DVGAGVAEGASAPRATVHEYDPKQYQDSQNDFHPMPELNGFPTGRRKKDSETLDELDRSL
EGMEAAEDQIGQEPENGESALAPILSPLSDPSSDRMDEKRGSLVDLLRMIREEIPALWAA
FPKVFSALIRSIDDVQPSIRSLAIRVLKDMVRAQPHTFHDVIGTTVSKVLQAHKDPQKEV
VRLAEEAAATIARSVAPEDCMRVLGPIINDSEFPVSLAALKMLTKVVEGVDSVTIEEHLP
DLIPGLVKCYDHVESSVRKASVFSLVALHAIVGEEVLLPHLAELSGTKMKLLNLYIKRSQ
ASSGGNHS
NT seq
4707 nt
NT seq
+upstream
nt +downstream
nt
atgagagataatccgttcctggatgagattctttctgctgtgtggtcacaagacactcag
aaacgtcttcgcgcagccgaggacctgtccaactacctgaacgacccgagcaacgacatc
gtattccatggctatgaaaggctgatagatggcctggttggatgggttaacagtagtaat
ttcagggtaagcctcagcggcttggaaatactacaccaaattgtggatcaaatgggagaa
aggtttaagcacagtctgctgcctgtcgttcctgctattatagaaaggcttggagacagc
aaacaacaggtccgccaacaagcccaagaattgattcaaaagtttatgtaccctgtgtct
accccacaacatgtgctagaacaactcattccagcatttaatcataaggcgtggcgagtc
cgggaagaagtgcttgtttgtattgtaaatgctattaatatatttggttcttccagcctg
actatatctaagtttgtccctcatatctgcaagcttctgggggaccccaatagtcaagtt
cgtgagcgggctattgacactctagtggagatctaccggcatgttggggagaaagtcagg
atagacctgagcaaaaagggtattccttcctcaagattgtccgttatctatgcaaagttt
gaccaagtggcaagatcaggcaacatggctctaaacgaaaatgatggccccagtaaggtc
aatggagaagttgaaacagatgggagcaagatatcgtctggcccgtccagagcctcatct
gggaggaagacatcatcggggcgtaagatcagtgggaccagaacacctggtgttggtagc
aaggaatctgcggctgctggagctgttgatgaggttgactttgctaatgcctttcaagag
tgtcctgaagctaggatacattctggaaaagatttaaatgatgaaatggcaaagatccag
accatactgtcagatgacaagaatgactgggaacaacgtgtggctgcattgaagaaggtc
cgtagcttggcgctagcaggaggcctggagtatgacaacttcatattgcttattaggctg
atggaaggggcattcaaattatcggcaaaagatctgcgatcaaccgtgattcgagaaacc
tgtgtaacccttggttttctttcaactgagcttaagaatcagtttgatcacacagcagaa
gcagtgctaccggcattgatcaacttaattcctaacagtgctaagattatggcaacatca
ggcatagcctgtattagcattatactaaagaacacacatgcacgccgtctagtgcctatc
atcacaagtaacctctcctccaaatcaagcgttataagaaggcaatgcatgacctatctt
gttctcattttggaaaaatgggaaacacagagtctgaaatcgaatgtgtctgagatcgag
gaagccattcggaaggggatatctgacgcggattccgaggccagggcctctgcgcgccga
gctttctgggtcttccatgaccacttcagggacaaggctgaaagtttgctcaagtcttta
gacgcctcgaaacaaaagcagctagagaatgatcggaatggtggcggtgcaagtacgaga
aagacaagcactaatagggcgcccgtcaggcaggcaaagtcggccagtactgcacggtca
aggacaccgagcacccagagctatcacagcgaggacggcagctccagtcgttacggagtg
ccttcccgacagacagtgggggctgctagcggcgcctcacgaaccaatcacagtcaaggt
tcccgccatgctgtcgcatctcgagcacaaaccaactcgtcgggatacctgtctcccatg
ggctacggccggtcacttagcaacatcgacagtcgcgccgctgagcgagccaacatgcgt
gccaaagcacgggcagcggctgccgccagggctccctcgccccagtctcgctccagcagg
tctacctttgctagccgcggatacgtctctcaaccaaccagtcgatcacattctccggag
agattgctcgcgactttcccgccaaaagagagaacagaagcgtacgtgcacggggtgagc
ccgaccaagactcgcattccgacccccagctttcgcctgaatcgtcactctagctacgag
tttctccctccttcctctccggtagacctctgccgctattctactaccacgccctcgtct
ccgcgccttctgtcacgcaatatatctcgccccagctcgcgtacaagttctcggtccagt
tcccgcggtcccagccgtgacccgagtccagagacgttacggagggagaggagattgagc
gaaggcaagggatattcaccgaccagcttaccaatgctgaagcgaaccacgcaccttcac
aatccaccattatcgcgatctcatcagcagtcctcgatagatgacgacgacccttcgctg
acagaggcagccctctgggactcctggtcccgcagtagtcccgtcagacgcaagtactca
ttcggctccagctcccagtgctccgacgatgacaacgacagtgacgcgggtagcctgtgc
tcggacagatcgatggggtcgcggggcaaccgcactcttggccgagcagaacctggaaat
gaggtagctgaaatagtccgcctctgccacaataacaactcgtccacggatcgaagagat
ggtattagcggtctgctggcattcctcaagagctcacgcgttatgagtgacgtagagctg
agcaagataaaggactgtctcacaaggttattctgtgaccctaataacaaggtgtatagc
gcgttcctggacgccctctgtgagttcatcgtggttcacaaggtggatttaaatgactgg
ttattcgtattgctgtctcgtctactcatcaagctgggtaccgacatcctcggctccatg
cagtccaaaattgtcagggtccttgatgtcatcagggactcattcccgtacgatcttcag
ttcagcatcctaacgcgtttcatcacggaccagacacagacgccaaacctcaaggtgaag
attgccgtccttcagtaccttcagggcctgatctcccttatggatcccagcgacttcaca
aattctggagaaactcgcctggccgtgtcgcggatcatctcgtggaccacagagcccaag
agtgccgatgtgcgcaaggagtccgcggccgtgatcgttgcgctgttcgagttgaataca
ccagagttcagtatgatgttgtccgttcttccaaagtcattccaggacggcgcaactaaa
ctgcttcacagtcatctaaaaagctctacacagtcgcccgaggctgctccatcgtctcgc
ggttccacaagcagtcagggctacagcacagcatacgacgagaccgacaacgcctccacc
acctcggagcgccccaagctacgcctggggtaccgcagcatgtcttccagctccctaaaa
gccgagtctggcaaggcagagcatcctgacgaggagaccgccgcagtacacagccccgag
attagacacaccctggatcaccactccaagatccccacgcatcgcgcgaccgcgcagagc
ccgcgagggcagactaaggtcggcgtgagcccacgaggacatctgcaccgcgataacagt
ggcgagggcgagggctcgacggactcccttgacagcaggcatggatccccattcggcttg
cgctcccatggctcgcagcacgaggacgcgcctagcgtatcatctgggtataacagcgat
gatgtgggtgccggtgtagccgagggcgcgtctgcacctcgcgccactgtgcatgagtac
gaccccaagcagtaccaggactcgcagaacgacttccacccgatgcccgagttgaacgga
ttccccacaggaagacgaaagaaagacagtgaaactctggacgagctagaccgctcgcta
gaaggcatggaggcggccgaggatcagataggccaggaacccgagaatggcgagagcgcc
ctggctcctatcctgagcccgctgtctgatccatcaagcgaccgcatggatgaaaagcgc
ggttccttggtggacctattgcgcatgatcagagaggaaatccccgccctttgggctgcc
ttcccaaaagtcttttcggcgctgataagatccatcgatgatgtccagccttccatccgg
tcccttgcgatccgagtgctcaaggacatggtgcgtgcgcagcctcacaccttccatgac
gtcatagggaccactgtcagcaaagtactgcaggcgcataaagatccacagaaagaggtg
gttcgccttgcggaggaagccgctgctaccatagcgcggtctgtggcccctgaggactgc
atgcgtgttctgggacccatcatcaatgattcagagttccccgtcagcctagcggcactc
aagatgctcaccaaggtggtggaaggcgtggatagcgtgactatcgaggagcatctcccg
gatctcattcctggacttgtcaagtgctatgatcacgtcgagagcagcgttcgtaaagct
agcgtattcagtctagttgcgctccacgcgatcgtgggagaggaagtccttttaccacac
ctggcagaactctctggcactaagatgaagttgctcaacctttacatcaaaagatcccag
gcgtctagcggtggaaatcactcgtga
DBGET
integrated database retrieval system
