KEGG   Nematostella vectensis (starlet sea anemone): 5517112
Entry
5517112           CDS       T01037                                 
Name
(RefSeq) probable U6 snRNA-associated Sm-like protein LSm4 isoform X2
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
nve  Nematostella vectensis (starlet sea anemone)
Pathway
nve03018  RNA degradation
nve03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nve00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    5517112
  09123 Folding, sorting and degradation
   03018 RNA degradation
    5517112
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nve03019]
    5517112
   03041 Spliceosome [BR:nve03041]
    5517112
Messenger RNA biogenesis [BR:nve03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     5517112
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     5517112
Spliceosome [BR:nve03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    5517112
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 5517112
NCBI-ProteinID: XP_001637201
UniProt: A7RTS4
LinkDB
Position
Unknown
AA seq 137 aa
MVLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDTWMNINLREVICTSRDGDKFWKIPEC
YVRGSNIKYLRIPDEVIDMVKEEVKQQGRGRGGGRGGGRGGRGGGGGGGGPGRGGRGGGG
GRGGAGGRGKRGDPAGR
NT seq 414 nt   +upstreamnt  +downstreamnt
atggtgcttccattatcgcttcttcgaacggctcaaaaccaccctatgctggtggaacta
aaaaatggtgagacgtacaacggccatcttgttagctgtgatacatggatgaacatcaac
ctgagagaggtcatttgtacatcaagggatggtgataagttctggaagatcccagaatgt
tatgtccgtggtagtaatataaagtatttgaggattccagatgaggtaatagacatggtc
aaagaggaagtcaagcagcaagggcgtggccgaggagggggcagaggtggagggcgtggt
ggacgaggtggtggaggtggtggagggggacctggaagaggaggtcgtggagggggtggg
ggacggggtggtgctggtgggcgtggcaagaggggtgacccagctggtcgatag

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